RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 CDK11AQ9UQ88 783 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-229ENST00000583697 POGZQ7Z3K3 1410 aa14.3□□□□□ -0.12
CDK5RAP3-229ENST00000583697 CCDC18Q5T9S5 1454 aa14.3□□□□□ -0.12
CDK5RAP3-229ENST00000583697 MAGI2Q86UL8 1455 aa14.3□□□□□ -0.12
CDK5RAP3-229ENST00000583697 TROQ12816 1431 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-229ENST00000583697 ARHGAP5Q13017 1502 aa14.29□□□□□ -0.12
CDK5RAP3-229ENST00000583697 FER1L4A9Z1Z3 1794 aa14.28□□□□□ -0.12
CDK5RAP3-229ENST00000583697 SIGLEC1Q9BZZ2 1709 aa14.27□□□□□ -0.12
CDK5RAP3-229ENST00000583697 PREX2Q70Z35 1606 aa14.27□□□□□ -0.12
CDK5RAP3-229ENST00000583697 SCAPERQ9BY12 1400 aa14.26□□□□□ -0.13
CDK5RAP3-229ENST00000583697 YEATS2Q9ULM3 1422 aa14.26□□□□□ -0.13
CDK5RAP3-229ENST00000583697 ZNF518AQ6AHZ1 1483 aa14.25□□□□□ -0.13
CDK5RAP3-229ENST00000583697 FYCO1Q9BQS8 1478 aa14.25□□□□□ -0.13
CDK5RAP3-229ENST00000583697 CDC42BPBQ9Y5S2 1711 aa14.24□□□□□ -0.13
CDK5RAP3-229ENST00000583697 CASKIN1Q8WXD9 1431 aa14.24□□□□□ -0.13
CDK5RAP3-229ENST00000583697 KDM5CP41229 1560 aa14.23□□□□□ -0.13
CDK5RAP3-229ENST00000583697 C9orf84Q5VXU9 1444 aa14.23□□□□□ -0.13
CDK5RAP3-229ENST00000583697 ITSN2Q9NZM3 1697 aa14.22□□□□□ -0.13
CDK5RAP3-229ENST00000583697 EFCAB2Q5VUJ9 269 aa14.21□□□□□ -0.13
CDK5RAP3-229ENST00000583697 CDC42BPAQ5VT25 1732 aa14.21□□□□□ -0.14
CDK5RAP3-229ENST00000583697 ABCC1P33527 1531 aa14.2□□□□□ -0.14
CDK5RAP3-229ENST00000583697 LMTK3Q96Q04 1460 aa14.2□□□□□ -0.14
CDK5RAP3-229ENST00000583697 ATP10AO60312 1499 aa14.18□□□□□ -0.14
CDK5RAP3-229ENST00000583697 DIP2CQ9Y2E4 1556 aa14.18□□□□□ -0.14
CDK5RAP3-229ENST00000583697 ABCA6Q8N139 1617 aa14.18□□□□□ -0.14
CDK5RAP3-229ENST00000583697 ARHGEF12Q9NZN5 1544 aa14.17□□□□□ -0.14
CDK5RAP3-229ENST00000583697 REREQ9P2R6 1566 aa14.17□□□□□ -0.14
CDK5RAP3-229ENST00000583697 ILDR1Q86SU0 546 aaPredicted RBP14.16□□□□□ -0.14
CDK5RAP3-229ENST00000583697 PREX1Q8TCU6 1659 aa14.15□□□□□ -0.14
CDK5RAP3-229ENST00000583697 MLECQ14165 292 aa14.15□□□□□ -0.14
CDK5RAP3-229ENST00000583697 MYT1LQ9UL68 1186 aa14.15□□□□□ -0.14
CDK5RAP3-229ENST00000583697 PLPPR3Q6T4P5 718 aa14.14□□□□□ -0.15
CDK5RAP3-229ENST00000583697 SAMD9LQ8IVG5 1584 aa14.13□□□□□ -0.15
CDK5RAP3-229ENST00000583697 MLH3Q9UHC1 1453 aa14.12□□□□□ -0.15
CDK5RAP3-229ENST00000583697 SYCP2Q9BX26 1530 aa14.11□□□□□ -0.15
CDK5RAP3-229ENST00000583697 KIDINS220Q9ULH0 1771 aa14.11□□□□□ -0.15
CDK5RAP3-229ENST00000583697 EHBP1L1Q8N3D4 1523 aa14.1□□□□□ -0.15
CDK5RAP3-229ENST00000583697 TRAPPC8Q9Y2L5 1435 aa14.09□□□□□ -0.15
CDK5RAP3-229ENST00000583697 AFAP1Q8N556 730 aa14.09□□□□□ -0.15
CDK5RAP3-229ENST00000583697 AGLP35573 1532 aa14.08□□□□□ -0.16
CDK5RAP3-229ENST00000583697 C3P01024 1663 aa14.07□□□□□ -0.16
CDK5RAP3-229ENST00000583697 MTUS2Q5JR59 1369 aa14.07□□□□□ -0.16
CDK5RAP3-229ENST00000583697 GPATCH8Q9UKJ3 1502 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-229ENST00000583697 INO80Q9ULG1 1556 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-229ENST00000583697 PLEKHH2Q8IVE3 1493 aa14.06□□□□□ -0.16
CDK5RAP3-229ENST00000583697 ATP7AQ04656 1500 aa14.05□□□□□ -0.16
CDK5RAP3-229ENST00000583697 TIAM1Q13009 1591 aa14.05□□□□□ -0.16
CDK5RAP3-229ENST00000583697 HSPA2P54652 639 aa14.04□□□□□ -0.16
CDK5RAP3-229ENST00000583697 ZNF777Q9ULD5 760 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-229ENST00000583697 CEP162Q5TB80 1403 aa14.04□□□□□ -0.16
CDK5RAP3-229ENST00000583697 MROH2AA6NES4 1674 aa14.04□□□□□ -0.16
CDK5RAP3-229ENST00000583697 SUPT6HQ7KZ85 1726 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-229ENST00000583697 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
CDK5RAP3-229ENST00000583697 UHRF1BP1Q6BDS2 1440 aa14.03□□□□□ -0.16
CDK5RAP3-229ENST00000583697 ESF1Q9H501 851 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-229ENST00000583697 ADGBQ8N7X0 1667 aa14.01□□□□□ -0.17
CDK5RAP3-229ENST00000583697 PLXNC1O60486 1568 aa14□□□□□ -0.17
CDK5RAP3-229ENST00000583697 CNTLNQ9NXG0 1405 aa14□□□□□ -0.17
CDK5RAP3-229ENST00000583697 FBXO41Q8TF61 875 aa14□□□□□ -0.17
CDK5RAP3-229ENST00000583697 KIAA1107Q9UPP5 1409 aa13.99□□□□□ -0.17
CDK5RAP3-229ENST00000583697 SPAG9O60271 1321 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-229ENST00000583697 CEBPAP49715 358 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-229ENST00000583697 CFDP1Q9UEE9 299 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-229ENST00000583697 CLTCQ00610 1675 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-229ENST00000583697 A2MP01023 1474 aa13.97□□□□□ -0.17
CDK5RAP3-229ENST00000583697 STRCQ7RTU9 1775 aa13.96□□□□□ -0.17
CDK5RAP3-229ENST00000583697 HNRNPMP52272 730 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDK5RAP3-229ENST00000583697 MYO3AQ8NEV4 1616 aa13.94□□□□□ -0.18
CDK5RAP3-229ENST00000583697 SETD1BQ9UPS6 1966 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-229ENST00000583697 ZNF142P52746 1687 aaPredicted RBP13.93□□□□□ -0.18
CDK5RAP3-229ENST00000583697 CAMSAP2Q08AD1 1489 aa13.93□□□□□ -0.18
CDK5RAP3-229ENST00000583697 NCOA2Q15596 1464 aa13.93□□□□□ -0.18
CDK5RAP3-229ENST00000583697 CCDC141Q6ZP82 1450 aa13.92□□□□□ -0.18
CDK5RAP3-229ENST00000583697 NPATQ14207 1427 aa13.91□□□□□ -0.18
CDK5RAP3-229ENST00000583697 MBD5Q9P267 1494 aa13.9□□□□□ -0.18
CDK5RAP3-229ENST00000583697 VPS8Q8N3P4 1428 aa13.9□□□□□ -0.19
CDK5RAP3-229ENST00000583697 DMRT2Q9Y5R5 561 aa13.89□□□□□ -0.19
CDK5RAP3-229ENST00000583697 RTEL1-TNFRSF6BF6WH68 1400 aa13.89□□□□□ -0.19
CDK5RAP3-229ENST00000583697 CAMSAP1Q5T5Y3 1602 aa13.88□□□□□ -0.19
CDK5RAP3-229ENST00000583697 ARHGEF5Q12774 1597 aa13.88□□□□□ -0.19
CDK5RAP3-229ENST00000583697 CEP170BQ9Y4F5 1589 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-229ENST00000583697 ZNF644Q9H582 1327 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-229ENST00000583697 ZMYM3Q14202 1370 aa13.86□□□□□ -0.19
CDK5RAP3-229ENST00000583697 FAM135AQ9P2D6 1515 aa13.86□□□□□ -0.19
CDK5RAP3-229ENST00000583697 CERKQ8TCT0 537 aa13.86□□□□□ -0.19
CDK5RAP3-229ENST00000583697 PTPRTO14522 1441 aa13.86□□□□□ -0.19
CDK5RAP3-229ENST00000583697 NCOA1Q15788 1441 aa13.86□□□□□ -0.19
CDK5RAP3-229ENST00000583697 LRRC9Q6ZRR7 1453 aa13.86□□□□□ -0.19
CDK5RAP3-229ENST00000583697 KDM5DQ9BY66 1539 aa13.85□□□□□ -0.19
CDK5RAP3-229ENST00000583697 GGT6Q6P531 493 aa13.85□□□□□ -0.19
CDK5RAP3-229ENST00000583697 MAP3K1Q13233 1512 aa13.83□□□□□ -0.2
CDK5RAP3-229ENST00000583697 PTPRKQ15262 1439 aa13.82□□□□□ -0.2
CDK5RAP3-229ENST00000583697 ZC3H13Q5T200 1668 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-229ENST00000583697 MAST1Q9Y2H9 1570 aa13.82□□□□□ -0.2
CDK5RAP3-229ENST00000583697 DHX29Q7Z478 1369 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-229ENST00000583697 PLA2R1Q13018 1463 aa13.81□□□□□ -0.2
CDK5RAP3-229ENST00000583697 EIF2AK4Q9P2K8 1649 aaKnown RBP13.81□□□□□ -0.2
CDK5RAP3-229ENST00000583697 POLR1AO95602 1720 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-229ENST00000583697 RSPH4AQ5TD94 716 aa13.8□□□□□ -0.2
CDK5RAP3-229ENST00000583697 PPP6R1Q9UPN7 881 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms