RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 GPATCH8Q9UKJ3 1502 aaKnown RBP25.07■■□□□ 1.6
CDK5RAP3-228ENST00000583363 RAPGEF3O95398 923 aa25.06■■□□□ 1.6
CDK5RAP3-228ENST00000583363 MYOM3Q5VTT5 1437 aa25.05■■□□□ 1.6
CDK5RAP3-228ENST00000583363 NEO1Q92859 1461 aa25.04■■□□□ 1.6
CDK5RAP3-228ENST00000583363 ADAMTSL3P82987 1691 aa25.04■■□□□ 1.6
CDK5RAP3-228ENST00000583363 FRMPD1Q5SYB0 1578 aa25.02■■□□□ 1.6
CDK5RAP3-228ENST00000583363 CFDP1Q9UEE9 299 aaPredicted RBP25.02■■□□□ 1.6
CDK5RAP3-228ENST00000583363 TTC37Q6PGP7 1564 aa25.01■■□□□ 1.59
CDK5RAP3-228ENST00000583363 PLCH2O75038 1416 aa25.01■■□□□ 1.59
CDK5RAP3-228ENST00000583363 MIA2Q96PC5 1412 aa25■■□□□ 1.59
CDK5RAP3-228ENST00000583363 PTPRMP28827 1452 aa24.99■■□□□ 1.59
CDK5RAP3-228ENST00000583363 TRIM26Q12899 539 aaPredicted RBP24.99■■□□□ 1.59
CDK5RAP3-228ENST00000583363 RRBP1Q9P2E9 1410 aaKnown RBP24.99■■□□□ 1.59
CDK5RAP3-228ENST00000583363 FGD6Q6ZV73 1430 aa24.98■■□□□ 1.59
CDK5RAP3-228ENST00000583363 CDC42BPAQ5VT25 1732 aa24.97■■□□□ 1.59
CDK5RAP3-228ENST00000583363 BCORL1Q5H9F3 1711 aa24.95■■□□□ 1.59
CDK5RAP3-228ENST00000583363 EFCAB2Q5VUJ9 269 aa24.95■■□□□ 1.58
CDK5RAP3-228ENST00000583363 ZNF777Q9ULD5 760 aaPredicted RBP24.93■■□□□ 1.58
CDK5RAP3-228ENST00000583363 MYO5CQ9NQX4 1742 aa24.92■■□□□ 1.58
CDK5RAP3-228ENST00000583363 CDC42BPBQ9Y5S2 1711 aa24.92■■□□□ 1.58
CDK5RAP3-228ENST00000583363 ZNF644Q9H582 1327 aaPredicted RBP24.92■■□□□ 1.58
CDK5RAP3-228ENST00000583363 ITSN2Q9NZM3 1697 aa24.92■■□□□ 1.58
CDK5RAP3-228ENST00000583363 MADDQ8WXG6 1647 aa24.91■■□□□ 1.58
CDK5RAP3-228ENST00000583363 FAM50AQ14320 339 aaKnown RBP24.91■■□□□ 1.58
CDK5RAP3-228ENST00000583363 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.91■■□□□ 1.58
CDK5RAP3-228ENST00000583363 PREX2Q70Z35 1606 aa24.9■■□□□ 1.58
CDK5RAP3-228ENST00000583363 RICTORQ6R327 1708 aa24.89■■□□□ 1.58
CDK5RAP3-228ENST00000583363 ARHGAP5Q13017 1502 aa24.89■■□□□ 1.57
CDK5RAP3-228ENST00000583363 TCOF1Q13428 1488 aaKnown RBP24.89■■□□□ 1.57
CDK5RAP3-228ENST00000583363 ARHGEF40Q8TER5 1519 aa24.88■■□□□ 1.57
CDK5RAP3-228ENST00000583363 PTPN23Q9H3S7 1636 aa24.88■■□□□ 1.57
CDK5RAP3-228ENST00000583363 ARID4BQ4LE39 1312 aaPredicted RBP24.87■■□□□ 1.57
CDK5RAP3-228ENST00000583363 DENND4BO75064 1496 aaPredicted RBP24.87■■□□□ 1.57
CDK5RAP3-228ENST00000583363 AKNAQ7Z591 1439 aa24.86■■□□□ 1.57
CDK5RAP3-228ENST00000583363 FANCAO15360 1455 aa24.84■■□□□ 1.57
CDK5RAP3-228ENST00000583363 CFAP74Q9C0B2 1584 aa24.83■■□□□ 1.57
CDK5RAP3-228ENST00000583363 CAMSAP2Q08AD1 1489 aa24.82■■□□□ 1.56
CDK5RAP3-228ENST00000583363 RIMS1Q86UR5 1692 aaKnown RBP24.81■■□□□ 1.56
CDK5RAP3-228ENST00000583363 HNRNPMP52272 730 aaKnown RBP eCLIP24.81■■□□□ 1.56
CDK5RAP3-228ENST00000583363 KIAA1107Q9UPP5 1409 aa24.8■■□□□ 1.56
CDK5RAP3-228ENST00000583363 SAMD9LQ8IVG5 1584 aa24.8■■□□□ 1.56
CDK5RAP3-228ENST00000583363 LMTK3Q96Q04 1460 aa24.79■■□□□ 1.56
CDK5RAP3-228ENST00000583363 PLEKHH2Q8IVE3 1493 aa24.78■■□□□ 1.56
CDK5RAP3-228ENST00000583363 ZMYM4Q5VZL5 1548 aa24.78■■□□□ 1.56
CDK5RAP3-228ENST00000583363 RSPH4AQ5TD94 716 aa24.78■■□□□ 1.56
CDK5RAP3-228ENST00000583363 FBXO41Q8TF61 875 aa24.78■■□□□ 1.56
CDK5RAP3-228ENST00000583363 SIGLEC1Q9BZZ2 1709 aa24.78■■□□□ 1.56
CDK5RAP3-228ENST00000583363 PCGF6Q9BYE7 350 aa24.77■■□□□ 1.56
CDK5RAP3-228ENST00000583363 ITGAEP38570 1179 aa24.76■■□□□ 1.55
CDK5RAP3-228ENST00000583363 MBD5Q9P267 1494 aa24.76■■□□□ 1.55
CDK5RAP3-228ENST00000583363 YEATS2Q9ULM3 1422 aa24.75■■□□□ 1.55
CDK5RAP3-228ENST00000583363 ZFYVE16Q7Z3T8 1539 aa24.74■■□□□ 1.55
CDK5RAP3-228ENST00000583363 ARHGEF12Q9NZN5 1544 aa24.74■■□□□ 1.55
CDK5RAP3-228ENST00000583363 ABCC5O15440 1437 aa24.73■■□□□ 1.55
CDK5RAP3-228ENST00000583363 SCAPERQ9BY12 1400 aa24.72■■□□□ 1.55
CDK5RAP3-228ENST00000583363 ABCC1P33527 1531 aa24.71■■□□□ 1.55
CDK5RAP3-228ENST00000583363 DAPK1P53355 1430 aa24.7■■□□□ 1.55
CDK5RAP3-228ENST00000583363 PTPRKQ15262 1439 aa24.7■■□□□ 1.55
CDK5RAP3-228ENST00000583363 POGZQ7Z3K3 1410 aa24.69■■□□□ 1.54
CDK5RAP3-228ENST00000583363 SYCP2Q9BX26 1530 aa24.69■■□□□ 1.54
CDK5RAP3-228ENST00000583363 MAGI2Q86UL8 1455 aa24.69■■□□□ 1.54
CDK5RAP3-228ENST00000583363 ARHGEF5Q12774 1597 aa24.68■■□□□ 1.54
CDK5RAP3-228ENST00000583363 TSPY4P0CV99 314 aa24.68■■□□□ 1.54
CDK5RAP3-228ENST00000583363 TSPY10P0CW01 314 aa24.68■■□□□ 1.54
CDK5RAP3-228ENST00000583363 TRAPPC8Q9Y2L5 1435 aa24.68■■□□□ 1.54
CDK5RAP3-228ENST00000583363 AFAP1Q8N556 730 aa24.67■■□□□ 1.54
CDK5RAP3-228ENST00000583363 DNMT1P26358 1616 aaKnown RBP24.67■■□□□ 1.54
CDK5RAP3-228ENST00000583363 PLPPR3Q6T4P5 718 aa24.66■■□□□ 1.54
CDK5RAP3-228ENST00000583363 HSPA2P54652 639 aa24.65■■□□□ 1.54
CDK5RAP3-228ENST00000583363 CHIC2Q9UKJ5 165 aa24.65■■□□□ 1.54
CDK5RAP3-228ENST00000583363 CCDC141Q6ZP82 1450 aa24.64■■□□□ 1.54
CDK5RAP3-228ENST00000583363 FER1L4A9Z1Z3 1794 aa24.63■■□□□ 1.53
CDK5RAP3-228ENST00000583363 MLECQ14165 292 aa24.63■■□□□ 1.53
CDK5RAP3-228ENST00000583363 SHANK2Q9UPX8 1470 aa24.58■■□□□ 1.53
CDK5RAP3-228ENST00000583363 C9orf84Q5VXU9 1444 aa24.58■■□□□ 1.53
CDK5RAP3-228ENST00000583363 SPAG9O60271 1321 aaKnown RBP24.58■■□□□ 1.52
CDK5RAP3-228ENST00000583363 ATP10AO60312 1499 aa24.58■■□□□ 1.52
CDK5RAP3-228ENST00000583363 ZNF518AQ6AHZ1 1483 aa24.57■■□□□ 1.52
CDK5RAP3-228ENST00000583363 ROCK1Q13464 1354 aa24.56■■□□□ 1.52
CDK5RAP3-228ENST00000583363 RRP7BPQ9NSQ0 103 aa24.55■■□□□ 1.52
CDK5RAP3-228ENST00000583363 RTEL1-TNFRSF6BF6WH68 1400 aa24.54■■□□□ 1.52
CDK5RAP3-228ENST00000583363 NCOA1Q15788 1441 aa24.54■■□□□ 1.52
CDK5RAP3-228ENST00000583363 CROCC2H7BZ55 1655 aa24.54■■□□□ 1.52
CDK5RAP3-228ENST00000583363 ADGRL2O95490 1459 aa24.53■■□□□ 1.52
CDK5RAP3-228ENST00000583363 MAST1Q9Y2H9 1570 aa24.53■■□□□ 1.52
CDK5RAP3-228ENST00000583363 ANKRD30AQ9BXX3 1397 aa24.53■■□□□ 1.52
CDK5RAP3-228ENST00000583363 KDM5CP41229 1560 aa24.5■■□□□ 1.51
CDK5RAP3-228ENST00000583363 MYT1LQ9UL68 1186 aa24.5■■□□□ 1.51
CDK5RAP3-228ENST00000583363 MLH3Q9UHC1 1453 aa24.5■■□□□ 1.51
CDK5RAP3-228ENST00000583363 HFM1A2PYH4 1435 aa24.47■■□□□ 1.51
CDK5RAP3-228ENST00000583363 NAIPQ13075 1403 aa24.47■■□□□ 1.51
CDK5RAP3-228ENST00000583363 SETD5Q9C0A6 1442 aa24.47■■□□□ 1.51
CDK5RAP3-228ENST00000583363 PREX1Q8TCU6 1659 aa24.46■■□□□ 1.51
CDK5RAP3-228ENST00000583363 CEBPAP49715 358 aaPredicted RBP24.46■■□□□ 1.51
CDK5RAP3-228ENST00000583363 ADGBQ8N7X0 1667 aa24.44■■□□□ 1.5
CDK5RAP3-228ENST00000583363 ATP7AQ04656 1500 aa24.44■■□□□ 1.5
CDK5RAP3-228ENST00000583363 KIF15Q9NS87 1388 aa24.43■■□□□ 1.5
CDK5RAP3-228ENST00000583363 INO80Q9ULG1 1556 aaPredicted RBP24.43■■□□□ 1.5
CDK5RAP3-228ENST00000583363 DIP2CQ9Y2E4 1556 aa24.43■■□□□ 1.5
CDK5RAP3-228ENST00000583363 KIDINS220Q9ULH0 1771 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms