RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 ITSN2Q9NZM3 1697 aa20.99■□□□□ 0.95
ITGB4-209ENST00000583327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.98■□□□□ 0.95
ITGB4-209ENST00000583327 MYO5CQ9NQX4 1742 aa20.98■□□□□ 0.95
ITGB4-209ENST00000583327 TCOF1Q13428 1488 aaKnown RBP20.97■□□□□ 0.95
ITGB4-209ENST00000583327 EFCAB2Q5VUJ9 269 aa20.97■□□□□ 0.95
ITGB4-209ENST00000583327 ZNF644Q9H582 1327 aaPredicted RBP20.93■□□□□ 0.94
ITGB4-209ENST00000583327 ARHGAP5Q13017 1502 aa20.93■□□□□ 0.94
ITGB4-209ENST00000583327 FANCAO15360 1455 aa20.92■□□□□ 0.94
ITGB4-209ENST00000583327 PTPN23Q9H3S7 1636 aa20.92■□□□□ 0.94
ITGB4-209ENST00000583327 PPRC1Q5VV67 1664 aaKnown RBP20.91■□□□□ 0.94
ITGB4-209ENST00000583327 KIAA1107Q9UPP5 1409 aa20.91■□□□□ 0.94
ITGB4-209ENST00000583327 SAMD9LQ8IVG5 1584 aa20.9■□□□□ 0.94
ITGB4-209ENST00000583327 NEO1Q92859 1461 aa20.9■□□□□ 0.94
ITGB4-209ENST00000583327 TRIM26Q12899 539 aaPredicted RBP20.9■□□□□ 0.94
ITGB4-209ENST00000583327 MBD5Q9P267 1494 aa20.88■□□□□ 0.93
ITGB4-209ENST00000583327 CAMSAP2Q08AD1 1489 aa20.88■□□□□ 0.93
ITGB4-209ENST00000583327 AKNAQ7Z591 1439 aa20.87■□□□□ 0.93
ITGB4-209ENST00000583327 TRHP20396 242 aaPredicted RBP20.87■□□□□ 0.93
ITGB4-209ENST00000583327 PLEKHH2Q8IVE3 1493 aa20.87■□□□□ 0.93
ITGB4-209ENST00000583327 ZNF777Q9ULD5 760 aaPredicted RBP20.86■□□□□ 0.93
ITGB4-209ENST00000583327 ARHGEF12Q9NZN5 1544 aa20.86■□□□□ 0.93
ITGB4-209ENST00000583327 TEX14Q8IWB6 1497 aa20.86■□□□□ 0.93
ITGB4-209ENST00000583327 CFAP74Q9C0B2 1584 aa20.85■□□□□ 0.93
ITGB4-209ENST00000583327 ABCC1P33527 1531 aa20.84■□□□□ 0.93
ITGB4-209ENST00000583327 RSPH4AQ5TD94 716 aa20.84■□□□□ 0.93
ITGB4-209ENST00000583327 FAM50AQ14320 339 aaKnown RBP20.83■□□□□ 0.93
ITGB4-209ENST00000583327 HNRNPMP52272 730 aaKnown RBP eCLIP20.82■□□□□ 0.92
ITGB4-209ENST00000583327 ARHGEF5Q12774 1597 aa20.81■□□□□ 0.92
ITGB4-209ENST00000583327 ABCC5O15440 1437 aa20.8■□□□□ 0.92
ITGB4-209ENST00000583327 SCAPERQ9BY12 1400 aa20.8■□□□□ 0.92
ITGB4-209ENST00000583327 ADGRL1O94910 1474 aa20.8■□□□□ 0.92
ITGB4-209ENST00000583327 TSPOAP1O95153 1857 aa20.79■□□□□ 0.92
ITGB4-209ENST00000583327 PTPRKQ15262 1439 aa20.78■□□□□ 0.92
ITGB4-209ENST00000583327 SYCP2Q9BX26 1530 aa20.78■□□□□ 0.92
ITGB4-209ENST00000583327 DNMT1P26358 1616 aaKnown RBP20.78■□□□□ 0.92
ITGB4-209ENST00000583327 DAPK1P53355 1430 aa20.78■□□□□ 0.92
ITGB4-209ENST00000583327 TRAPPC8Q9Y2L5 1435 aa20.78■□□□□ 0.92
ITGB4-209ENST00000583327 CCDC141Q6ZP82 1450 aa20.75■□□□□ 0.91
ITGB4-209ENST00000583327 COL17A1Q9UMD9 1497 aaPredicted RBP20.75■□□□□ 0.91
ITGB4-209ENST00000583327 DENND4BO75064 1496 aaPredicted RBP20.74■□□□□ 0.91
ITGB4-209ENST00000583327 POGZQ7Z3K3 1410 aa20.73■□□□□ 0.91
ITGB4-209ENST00000583327 AFAP1Q8N556 730 aa20.73■□□□□ 0.91
ITGB4-209ENST00000583327 SHANK2Q9UPX8 1470 aa20.72■□□□□ 0.91
ITGB4-209ENST00000583327 ZNF518AQ6AHZ1 1483 aa20.71■□□□□ 0.91
ITGB4-209ENST00000583327 TSPY4P0CV99 314 aa20.7■□□□□ 0.9
ITGB4-209ENST00000583327 TSPY10P0CW01 314 aa20.7■□□□□ 0.9
ITGB4-209ENST00000583327 KDM5CP41229 1560 aa20.7■□□□□ 0.9
ITGB4-209ENST00000583327 MAST1Q9Y2H9 1570 aa20.7■□□□□ 0.9
ITGB4-209ENST00000583327 RTEL1-TNFRSF6BF6WH68 1400 aa20.7■□□□□ 0.9
ITGB4-209ENST00000583327 RAPGEF3O95398 923 aa20.69■□□□□ 0.9
ITGB4-209ENST00000583327 ROCK1Q13464 1354 aa20.69■□□□□ 0.9
ITGB4-209ENST00000583327 CROCC2H7BZ55 1655 aa20.68■□□□□ 0.9
ITGB4-209ENST00000583327 RICTORQ6R327 1708 aa20.68■□□□□ 0.9
ITGB4-209ENST00000583327 ADGRL2O95490 1459 aa20.68■□□□□ 0.9
ITGB4-209ENST00000583327 FRMPD1Q5SYB0 1578 aa20.68■□□□□ 0.9
ITGB4-209ENST00000583327 ITGAEP38570 1179 aa20.67■□□□□ 0.9
ITGB4-209ENST00000583327 MLH3Q9UHC1 1453 aa20.67■□□□□ 0.9
ITGB4-209ENST00000583327 NCOA1Q15788 1441 aa20.66■□□□□ 0.9
ITGB4-209ENST00000583327 C9orf84Q5VXU9 1444 aa20.66■□□□□ 0.9
ITGB4-209ENST00000583327 SPAG9O60271 1321 aaKnown RBP20.65■□□□□ 0.9
ITGB4-209ENST00000583327 PCGF6Q9BYE7 350 aa20.65■□□□□ 0.9
ITGB4-209ENST00000583327 ZMYM4Q5VZL5 1548 aa20.63■□□□□ 0.89
ITGB4-209ENST00000583327 CHIC2Q9UKJ5 165 aa20.63■□□□□ 0.89
ITGB4-209ENST00000583327 INO80Q9ULG1 1556 aaPredicted RBP20.62■□□□□ 0.89
ITGB4-209ENST00000583327 ZFYVE16Q7Z3T8 1539 aa20.61■□□□□ 0.89
ITGB4-209ENST00000583327 MAGI2Q86UL8 1455 aa20.61■□□□□ 0.89
ITGB4-209ENST00000583327 ANKRD30AQ9BXX3 1397 aa20.6■□□□□ 0.89
ITGB4-209ENST00000583327 KIDINS220Q9ULH0 1771 aa20.59■□□□□ 0.89
ITGB4-209ENST00000583327 HFM1A2PYH4 1435 aa20.59■□□□□ 0.89
ITGB4-209ENST00000583327 NAIPQ13075 1403 aa20.59■□□□□ 0.89
ITGB4-209ENST00000583327 PLXNC1O60486 1568 aa20.59■□□□□ 0.89
ITGB4-209ENST00000583327 ATP7AQ04656 1500 aa20.58■□□□□ 0.89
ITGB4-209ENST00000583327 HECW2Q9P2P5 1572 aa20.57■□□□□ 0.88
ITGB4-209ENST00000583327 ADGBQ8N7X0 1667 aa20.57■□□□□ 0.88
ITGB4-209ENST00000583327 KDM6BO15054 1643 aa20.56■□□□□ 0.88
ITGB4-209ENST00000583327 RRP7BPQ9NSQ0 103 aa20.56■□□□□ 0.88
ITGB4-209ENST00000583327 HRCP23327 699 aa20.54■□□□□ 0.88
ITGB4-209ENST00000583327 KIF15Q9NS87 1388 aa20.53■□□□□ 0.88
ITGB4-209ENST00000583327 SETD5Q9C0A6 1442 aa20.53■□□□□ 0.88
ITGB4-209ENST00000583327 YEATS2Q9ULM3 1422 aa20.53■□□□□ 0.88
ITGB4-209ENST00000583327 DHX29Q7Z478 1369 aaKnown RBP20.51■□□□□ 0.87
ITGB4-209ENST00000583327 DUOX2Q9NRD8 1548 aa20.5■□□□□ 0.87
ITGB4-209ENST00000583327 DIP2CQ9Y2E4 1556 aa20.5■□□□□ 0.87
ITGB4-209ENST00000583327 ABCA6Q8N139 1617 aa20.49■□□□□ 0.87
ITGB4-209ENST00000583327 GCC2Q8IWJ2 1684 aa20.49■□□□□ 0.87
ITGB4-209ENST00000583327 ANKRD50Q9ULJ7 1429 aa20.48■□□□□ 0.87
ITGB4-209ENST00000583327 ATP10AO60312 1499 aa20.48■□□□□ 0.87
ITGB4-209ENST00000583327 REREQ9P2R6 1566 aa20.47■□□□□ 0.87
ITGB4-209ENST00000583327 A2MP01023 1474 aa20.47■□□□□ 0.87
ITGB4-209ENST00000583327 ERBINQ96RT1 1412 aa20.46■□□□□ 0.87
ITGB4-209ENST00000583327 MYT1LQ9UL68 1186 aa20.46■□□□□ 0.87
ITGB4-209ENST00000583327 RAB3GAP2Q9H2M9 1393 aa20.46■□□□□ 0.87
ITGB4-209ENST00000583327 ARHGEF40Q8TER5 1519 aa20.45■□□□□ 0.86
ITGB4-209ENST00000583327 ACIN1Q9UKV3 1341 aaKnown RBP20.43■□□□□ 0.86
ITGB4-209ENST00000583327 AGLP35573 1532 aa20.41■□□□□ 0.86
ITGB4-209ENST00000583327 BCORL1Q5H9F3 1711 aa20.4■□□□□ 0.86
ITGB4-209ENST00000583327 EIF2AK4Q9P2K8 1649 aaKnown RBP20.39■□□□□ 0.86
ITGB4-209ENST00000583327 SIGLEC1Q9BZZ2 1709 aa20.36■□□□□ 0.85
ITGB4-209ENST00000583327 KIF3BO15066 747 aa20.35■□□□□ 0.85
ITGB4-209ENST00000583327 DEPDC5O75140 1603 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms