RNA–Protein interactions for RNA: ENST00000583213.1

TNFAIP1-206, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-206ENST00000583213 CDK11AQ9UQ88 783 aaPredicted RBP26.54■■□□□ 1.84
TNFAIP1-206ENST00000583213 SCAPERQ9BY12 1400 aa26.53■■□□□ 1.84
TNFAIP1-206ENST00000583213 ARID4BQ4LE39 1312 aaPredicted RBP26.5■■□□□ 1.83
TNFAIP1-206ENST00000583213 CASKIN1Q8WXD9 1431 aa26.48■■□□□ 1.83
TNFAIP1-206ENST00000583213 RIMS1Q86UR5 1692 aaKnown RBP26.48■■□□□ 1.83
TNFAIP1-206ENST00000583213 EFCAB2Q5VUJ9 269 aa26.48■■□□□ 1.83
TNFAIP1-206ENST00000583213 ILDR1Q86SU0 546 aaPredicted RBP26.48■■□□□ 1.83
TNFAIP1-206ENST00000583213 CLIP1P30622 1438 aa26.48■■□□□ 1.83
TNFAIP1-206ENST00000583213 PCF11O94913 1555 aaKnown RBP26.47■■□□□ 1.83
TNFAIP1-206ENST00000583213 ATP1B4Q9UN42 357 aaPredicted RBP26.46■■□□□ 1.83
TNFAIP1-206ENST00000583213 CCDC18Q5T9S5 1454 aa26.46■■□□□ 1.83
TNFAIP1-206ENST00000583213 KDM5CP41229 1560 aa26.46■■□□□ 1.83
TNFAIP1-206ENST00000583213 LMTK3Q96Q04 1460 aa26.45■■□□□ 1.82
TNFAIP1-206ENST00000583213 ZNF518AQ6AHZ1 1483 aa26.42■■□□□ 1.82
TNFAIP1-206ENST00000583213 ATP10AO60312 1499 aa26.42■■□□□ 1.82
TNFAIP1-206ENST00000583213 ARHGAP5Q13017 1502 aa26.41■■□□□ 1.82
TNFAIP1-206ENST00000583213 CDC42BPBQ9Y5S2 1711 aa26.4■■□□□ 1.82
TNFAIP1-206ENST00000583213 C9orf84Q5VXU9 1444 aa26.39■■□□□ 1.82
TNFAIP1-206ENST00000583213 ARHGEF12Q9NZN5 1544 aa26.39■■□□□ 1.82
TNFAIP1-206ENST00000583213 PREX2Q70Z35 1606 aa26.39■■□□□ 1.82
TNFAIP1-206ENST00000583213 FYCO1Q9BQS8 1478 aa26.39■■□□□ 1.82
TNFAIP1-206ENST00000583213 FER1L4A9Z1Z3 1794 aa26.37■■□□□ 1.81
TNFAIP1-206ENST00000583213 REREQ9P2R6 1566 aa26.35■■□□□ 1.81
TNFAIP1-206ENST00000583213 ABCC1P33527 1531 aa26.34■■□□□ 1.81
TNFAIP1-206ENST00000583213 MLH3Q9UHC1 1453 aa26.31■■□□□ 1.8
TNFAIP1-206ENST00000583213 DIP2CQ9Y2E4 1556 aa26.31■■□□□ 1.8
TNFAIP1-206ENST00000583213 CDC42BPAQ5VT25 1732 aa26.3■■□□□ 1.8
TNFAIP1-206ENST00000583213 AFAP1Q8N556 730 aa26.29■■□□□ 1.8
TNFAIP1-206ENST00000583213 ITSN2Q9NZM3 1697 aa26.28■■□□□ 1.8
TNFAIP1-206ENST00000583213 ABCA6Q8N139 1617 aa26.27■■□□□ 1.8
TNFAIP1-206ENST00000583213 TRAPPC8Q9Y2L5 1435 aa26.24■■□□□ 1.79
TNFAIP1-206ENST00000583213 MLECQ14165 292 aa26.23■■□□□ 1.79
TNFAIP1-206ENST00000583213 AGLP35573 1532 aa26.23■■□□□ 1.79
TNFAIP1-206ENST00000583213 KIDINS220Q9ULH0 1771 aa26.2■■□□□ 1.78
TNFAIP1-206ENST00000583213 GPATCH8Q9UKJ3 1502 aaKnown RBP26.19■■□□□ 1.78
TNFAIP1-206ENST00000583213 SAMD9LQ8IVG5 1584 aa26.18■■□□□ 1.78
TNFAIP1-206ENST00000583213 PREX1Q8TCU6 1659 aa26.18■■□□□ 1.78
TNFAIP1-206ENST00000583213 HSPA2P54652 639 aa26.14■■□□□ 1.78
TNFAIP1-206ENST00000583213 FBXO41Q8TF61 875 aa26.14■■□□□ 1.78
TNFAIP1-206ENST00000583213 KIAA1107Q9UPP5 1409 aa26.12■■□□□ 1.77
TNFAIP1-206ENST00000583213 SYCP2Q9BX26 1530 aa26.11■■□□□ 1.77
TNFAIP1-206ENST00000583213 SETD1BQ9UPS6 1966 aaKnown RBP26.09■■□□□ 1.77
TNFAIP1-206ENST00000583213 PLPPR3Q6T4P5 718 aa26.09■■□□□ 1.77
TNFAIP1-206ENST00000583213 PLEKHH2Q8IVE3 1493 aa26.08■■□□□ 1.77
TNFAIP1-206ENST00000583213 C3P01024 1663 aa26.07■■□□□ 1.76
TNFAIP1-206ENST00000583213 CEBPAP49715 358 aaPredicted RBP26.06■■□□□ 1.76
TNFAIP1-206ENST00000583213 MYT1LQ9UL68 1186 aa26.06■■□□□ 1.76
TNFAIP1-206ENST00000583213 INO80Q9ULG1 1556 aaPredicted RBP26.05■■□□□ 1.76
TNFAIP1-206ENST00000583213 PLXNC1O60486 1568 aa26.03■■□□□ 1.76
TNFAIP1-206ENST00000583213 MTUS2Q5JR59 1369 aa26.03■■□□□ 1.76
TNFAIP1-206ENST00000583213 CNTLNQ9NXG0 1405 aa26.03■■□□□ 1.76
TNFAIP1-206ENST00000583213 EHBP1L1Q8N3D4 1523 aa26.03■■□□□ 1.76
TNFAIP1-206ENST00000583213 CCNB3Q8WWL7 1395 aa26.02■■□□□ 1.76
TNFAIP1-206ENST00000583213 UHRF1BP1Q6BDS2 1440 aa26.02■■□□□ 1.76
TNFAIP1-206ENST00000583213 ATP7AQ04656 1500 aa26.02■■□□□ 1.76
TNFAIP1-206ENST00000583213 TIAM1Q13009 1591 aa26.02■■□□□ 1.76
TNFAIP1-206ENST00000583213 CEP162Q5TB80 1403 aa26.01■■□□□ 1.75
TNFAIP1-206ENST00000583213 CFDP1Q9UEE9 299 aaPredicted RBP26■■□□□ 1.75
TNFAIP1-206ENST00000583213 STRCQ7RTU9 1775 aa26■■□□□ 1.75
TNFAIP1-206ENST00000583213 MROH2AA6NES4 1674 aa25.99■■□□□ 1.75
TNFAIP1-206ENST00000583213 SPAG9O60271 1321 aaKnown RBP25.99■■□□□ 1.75
TNFAIP1-206ENST00000583213 ZNF777Q9ULD5 760 aaPredicted RBP25.99■■□□□ 1.75
TNFAIP1-206ENST00000583213 HNRNPMP52272 730 aaKnown RBP eCLIP25.98■■□□□ 1.75
TNFAIP1-206ENST00000583213 MBD5Q9P267 1494 aa25.95■■□□□ 1.74
TNFAIP1-206ENST00000583213 A2MP01023 1474 aa25.93■■□□□ 1.74
TNFAIP1-206ENST00000583213 NPATQ14207 1427 aa25.93■■□□□ 1.74
TNFAIP1-206ENST00000583213 SUPT6HQ7KZ85 1726 aaKnown RBP25.92■■□□□ 1.74
TNFAIP1-206ENST00000583213 ADGBQ8N7X0 1667 aa25.9■■□□□ 1.74
TNFAIP1-206ENST00000583213 ESF1Q9H501 851 aaKnown RBP25.9■■□□□ 1.74
TNFAIP1-206ENST00000583213 DMRT2Q9Y5R5 561 aa25.88■■□□□ 1.73
TNFAIP1-206ENST00000583213 RTEL1-TNFRSF6BF6WH68 1400 aa25.88■■□□□ 1.73
TNFAIP1-206ENST00000583213 CERKQ8TCT0 537 aa25.87■■□□□ 1.73
TNFAIP1-206ENST00000583213 ZNF644Q9H582 1327 aaPredicted RBP25.87■■□□□ 1.73
TNFAIP1-206ENST00000583213 PTPRTO14522 1441 aa25.86■■□□□ 1.73
TNFAIP1-206ENST00000583213 ZMYM3Q14202 1370 aa25.85■■□□□ 1.73
TNFAIP1-206ENST00000583213 NCOA2Q15596 1464 aa25.85■■□□□ 1.73
TNFAIP1-206ENST00000583213 CLTCQ00610 1675 aaKnown RBP25.83■■□□□ 1.73
TNFAIP1-206ENST00000583213 NCOA1Q15788 1441 aa25.83■■□□□ 1.73
TNFAIP1-206ENST00000583213 PPP6R1Q9UPN7 881 aa25.8■■□□□ 1.72
TNFAIP1-206ENST00000583213 ZNF142P52746 1687 aaPredicted RBP25.8■■□□□ 1.72
TNFAIP1-206ENST00000583213 PTPRKQ15262 1439 aa25.79■■□□□ 1.72
TNFAIP1-206ENST00000583213 CAMSAP2Q08AD1 1489 aa25.79■■□□□ 1.72
TNFAIP1-206ENST00000583213 CCDC141Q6ZP82 1450 aa25.79■■□□□ 1.72
TNFAIP1-206ENST00000583213 VPS8Q8N3P4 1428 aa25.78■■□□□ 1.72
TNFAIP1-206ENST00000583213 MYO3AQ8NEV4 1616 aa25.77■■□□□ 1.72
TNFAIP1-206ENST00000583213 DHX29Q7Z478 1369 aaKnown RBP25.76■■□□□ 1.71
TNFAIP1-206ENST00000583213 ARHGEF5Q12774 1597 aa25.75■■□□□ 1.71
TNFAIP1-206ENST00000583213 FAM135AQ9P2D6 1515 aa25.75■■□□□ 1.71
TNFAIP1-206ENST00000583213 CAMSAP1Q5T5Y3 1602 aa25.74■■□□□ 1.71
TNFAIP1-206ENST00000583213 RSPH4AQ5TD94 716 aa25.73■■□□□ 1.71
TNFAIP1-206ENST00000583213 MAP3K1Q13233 1512 aa25.73■■□□□ 1.71
TNFAIP1-206ENST00000583213 LRRC9Q6ZRR7 1453 aa25.72■■□□□ 1.71
TNFAIP1-206ENST00000583213 LTBP4Q8N2S1 1624 aa25.72■■□□□ 1.71
TNFAIP1-206ENST00000583213 PLA2R1Q13018 1463 aa25.72■■□□□ 1.71
TNFAIP1-206ENST00000583213 CEP170BQ9Y4F5 1589 aaPredicted RBP25.71■■□□□ 1.71
TNFAIP1-206ENST00000583213 GGT6Q6P531 493 aa25.71■■□□□ 1.71
TNFAIP1-206ENST00000583213 TCOF1Q13428 1488 aaKnown RBP25.67■■□□□ 1.7
TNFAIP1-206ENST00000583213 IQSEC2Q5JU85 1478 aa25.66■■□□□ 1.7
TNFAIP1-206ENST00000583213 KDM5DQ9BY66 1539 aa25.65■■□□□ 1.7
TNFAIP1-206ENST00000583213 MAST1Q9Y2H9 1570 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms