RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 NEO1Q92859 1461 aa13.05□□□□□ -0.32
KPNB1-213ENST00000583013 ARAP3Q8WWN8 1544 aa13.05□□□□□ -0.32
KPNB1-213ENST00000583013 KIF14Q15058 1648 aa13.05□□□□□ -0.32
KPNB1-213ENST00000583013 PHLDB1Q86UU1 1377 aa13.05□□□□□ -0.32
KPNB1-213ENST00000583013 TROQ12816 1431 aaPredicted RBP13.05□□□□□ -0.32
KPNB1-213ENST00000583013 CFAP74Q9C0B2 1584 aa13.04□□□□□ -0.32
KPNB1-213ENST00000583013 ATP1B4Q9UN42 357 aaPredicted RBP13.04□□□□□ -0.32
KPNB1-213ENST00000583013 CDK11AQ9UQ88 783 aaPredicted RBP13.03□□□□□ -0.32
KPNB1-213ENST00000583013 MYO5CQ9NQX4 1742 aa13.02□□□□□ -0.33
KPNB1-213ENST00000583013 FANCAO15360 1455 aa12.99□□□□□ -0.33
KPNB1-213ENST00000583013 LOC105371045A0A1W2PR82 267 aa12.99□□□□□ -0.33
KPNB1-213ENST00000583013 FRMPD1Q5SYB0 1578 aa12.98□□□□□ -0.33
KPNB1-213ENST00000583013 PLCH2O75038 1416 aa12.98□□□□□ -0.33
KPNB1-213ENST00000583013 RICTORQ6R327 1708 aa12.96□□□□□ -0.33
KPNB1-213ENST00000583013 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
KPNB1-213ENST00000583013 AKNAQ7Z591 1439 aa12.96□□□□□ -0.34
KPNB1-213ENST00000583013 PREX2Q70Z35 1606 aa12.95□□□□□ -0.34
KPNB1-213ENST00000583013 SLC4A2P04920 1241 aa12.95□□□□□ -0.34
KPNB1-213ENST00000583013 CDC42BPBQ9Y5S2 1711 aa12.95□□□□□ -0.34
KPNB1-213ENST00000583013 VPS8Q8N3P4 1428 aa12.95□□□□□ -0.34
KPNB1-213ENST00000583013 CDC42BPAQ5VT25 1732 aa12.93□□□□□ -0.34
KPNB1-213ENST00000583013 DENND4BO75064 1496 aaPredicted RBP12.93□□□□□ -0.34
KPNB1-213ENST00000583013 ZMYM4Q5VZL5 1548 aa12.93□□□□□ -0.34
KPNB1-213ENST00000583013 EHBP1L1Q8N3D4 1523 aa12.93□□□□□ -0.34
KPNB1-213ENST00000583013 ADGRL1O94910 1474 aa12.92□□□□□ -0.34
KPNB1-213ENST00000583013 ARHGAP5Q13017 1502 aa12.92□□□□□ -0.34
KPNB1-213ENST00000583013 TIAM1Q13009 1591 aa12.91□□□□□ -0.34
KPNB1-213ENST00000583013 ARHGEF40Q8TER5 1519 aa12.9□□□□□ -0.34
KPNB1-213ENST00000583013 RAPGEF3O95398 923 aa12.9□□□□□ -0.34
KPNB1-213ENST00000583013 EFCAB2Q5VUJ9 269 aa12.9□□□□□ -0.34
KPNB1-213ENST00000583013 POGZQ7Z3K3 1410 aa12.89□□□□□ -0.35
KPNB1-213ENST00000583013 MTUS2Q5JR59 1369 aa12.89□□□□□ -0.35
KPNB1-213ENST00000583013 ABCC1P33527 1531 aa12.88□□□□□ -0.35
KPNB1-213ENST00000583013 MAP3K1Q13233 1512 aa12.88□□□□□ -0.35
KPNB1-213ENST00000583013 SCAPERQ9BY12 1400 aa12.88□□□□□ -0.35
KPNB1-213ENST00000583013 ITSN2Q9NZM3 1697 aa12.87□□□□□ -0.35
KPNB1-213ENST00000583013 MAGI2Q86UL8 1455 aa12.87□□□□□ -0.35
KPNB1-213ENST00000583013 GPATCH8Q9UKJ3 1502 aaKnown RBP12.87□□□□□ -0.35
KPNB1-213ENST00000583013 KDM5CP41229 1560 aa12.86□□□□□ -0.35
KPNB1-213ENST00000583013 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
KPNB1-213ENST00000583013 ZNF518AQ6AHZ1 1483 aa12.85□□□□□ -0.35
KPNB1-213ENST00000583013 ZFYVE16Q7Z3T8 1539 aa12.85□□□□□ -0.35
KPNB1-213ENST00000583013 KDM4FA0A1W2PPD8 638 aa12.85□□□□□ -0.35
KPNB1-213ENST00000583013 SAMD9LQ8IVG5 1584 aa12.85□□□□□ -0.35
KPNB1-213ENST00000583013 LRRC9Q6ZRR7 1453 aa12.83□□□□□ -0.36
KPNB1-213ENST00000583013 ARHGEF12Q9NZN5 1544 aa12.83□□□□□ -0.36
KPNB1-213ENST00000583013 CCNB3Q8WWL7 1395 aa12.82□□□□□ -0.36
KPNB1-213ENST00000583013 HECW2Q9P2P5 1572 aa12.82□□□□□ -0.36
KPNB1-213ENST00000583013 NCOA2Q15596 1464 aa12.81□□□□□ -0.36
KPNB1-213ENST00000583013 C1QBPQ07021 282 aaKnown RBP12.81□□□□□ -0.36
KPNB1-213ENST00000583013 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
KPNB1-213ENST00000583013 YEATS2Q9ULM3 1422 aa12.8□□□□□ -0.36
KPNB1-213ENST00000583013 PLEKHH2Q8IVE3 1493 aa12.8□□□□□ -0.36
KPNB1-213ENST00000583013 BCORL1Q5H9F3 1711 aa12.8□□□□□ -0.36
KPNB1-213ENST00000583013 SYCP2Q9BX26 1530 aa12.8□□□□□ -0.36
KPNB1-213ENST00000583013 ADAMTSL3P82987 1691 aa12.8□□□□□ -0.36
KPNB1-213ENST00000583013 KIAA1107Q9UPP5 1409 aa12.79□□□□□ -0.36
KPNB1-213ENST00000583013 SIGLEC1Q9BZZ2 1709 aa12.79□□□□□ -0.36
KPNB1-213ENST00000583013 MLH3Q9UHC1 1453 aa12.79□□□□□ -0.36
KPNB1-213ENST00000583013 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
KPNB1-213ENST00000583013 REREQ9P2R6 1566 aa12.78□□□□□ -0.36
KPNB1-213ENST00000583013 DIP2CQ9Y2E4 1556 aa12.77□□□□□ -0.36
KPNB1-213ENST00000583013 ABCA6Q8N139 1617 aa12.77□□□□□ -0.36
KPNB1-213ENST00000583013 KIDINS220Q9ULH0 1771 aa12.77□□□□□ -0.36
KPNB1-213ENST00000583013 CFDP1Q9UEE9 299 aaPredicted RBP12.77□□□□□ -0.37
KPNB1-213ENST00000583013 C9orf84Q5VXU9 1444 aa12.77□□□□□ -0.37
KPNB1-213ENST00000583013 ATP10AO60312 1499 aa12.77□□□□□ -0.37
KPNB1-213ENST00000583013 CACNB1Q02641 598 aaPredicted RBP12.76□□□□□ -0.37
KPNB1-213ENST00000583013 AFAP1Q8N556 730 aa12.76□□□□□ -0.37
KPNB1-213ENST00000583013 INO80Q9ULG1 1556 aaPredicted RBP12.75□□□□□ -0.37
KPNB1-213ENST00000583013 KANK4Q5T7N3 995 aaPredicted RBP12.74□□□□□ -0.37
KPNB1-213ENST00000583013 ZNF777Q9ULD5 760 aaPredicted RBP12.74□□□□□ -0.37
KPNB1-213ENST00000583013 MADDQ8WXG6 1647 aa12.73□□□□□ -0.37
KPNB1-213ENST00000583013 MBD5Q9P267 1494 aa12.73□□□□□ -0.37
KPNB1-213ENST00000583013 FOXD4L1Q9NU39 408 aa12.73□□□□□ -0.37
KPNB1-213ENST00000583013 ATP7AQ04656 1500 aa12.72□□□□□ -0.37
KPNB1-213ENST00000583013 CAMSAP2Q08AD1 1489 aa12.72□□□□□ -0.37
KPNB1-213ENST00000583013 APLP2Q06481 763 aa12.71□□□□□ -0.37
KPNB1-213ENST00000583013 ARHGEF5Q12774 1597 aa12.71□□□□□ -0.37
KPNB1-213ENST00000583013 AGLP35573 1532 aa12.71□□□□□ -0.38
KPNB1-213ENST00000583013 MYOM3Q5VTT5 1437 aa12.71□□□□□ -0.38
KPNB1-213ENST00000583013 MIA2Q96PC5 1412 aa12.71□□□□□ -0.38
KPNB1-213ENST00000583013 ARID4BQ4LE39 1312 aaPredicted RBP12.7□□□□□ -0.38
KPNB1-213ENST00000583013 ZNF644Q9H582 1327 aaPredicted RBP12.7□□□□□ -0.38
KPNB1-213ENST00000583013 HNRNPMP52272 730 aaKnown RBP eCLIP12.7□□□□□ -0.38
KPNB1-213ENST00000583013 FER1L4A9Z1Z3 1794 aa12.7□□□□□ -0.38
KPNB1-213ENST00000583013 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
KPNB1-213ENST00000583013 PTPRMP28827 1452 aa12.69□□□□□ -0.38
KPNB1-213ENST00000583013 RIMS1Q86UR5 1692 aaKnown RBP12.69□□□□□ -0.38
KPNB1-213ENST00000583013 ADGBQ8N7X0 1667 aa12.69□□□□□ -0.38
KPNB1-213ENST00000583013 PLXNC1O60486 1568 aa12.69□□□□□ -0.38
KPNB1-213ENST00000583013 SPAG9O60271 1321 aaKnown RBP12.68□□□□□ -0.38
KPNB1-213ENST00000583013 ZBTB22O15209 634 aa12.68□□□□□ -0.38
KPNB1-213ENST00000583013 RTEL1-TNFRSF6BF6WH68 1400 aa12.68□□□□□ -0.38
KPNB1-213ENST00000583013 MYT1LQ9UL68 1186 aa12.66□□□□□ -0.38
KPNB1-213ENST00000583013 MAST1Q9Y2H9 1570 aa12.65□□□□□ -0.38
KPNB1-213ENST00000583013 RSPH4AQ5TD94 716 aa12.65□□□□□ -0.38
KPNB1-213ENST00000583013 PTPN23Q9H3S7 1636 aa12.65□□□□□ -0.38
KPNB1-213ENST00000583013 A2MP01023 1474 aa12.64□□□□□ -0.39
KPNB1-213ENST00000583013 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms