RNA–Protein interactions for RNA: ENST00000582818.5

ERBB2-213, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-213ENST00000582818 RIMS1Q86UR5 1692 aaKnown RBP22.97■■□□□ 1.27
ERBB2-213ENST00000582818 TROQ12816 1431 aaPredicted RBP22.97■■□□□ 1.27
ERBB2-213ENST00000582818 KIF14Q15058 1648 aa22.97■■□□□ 1.27
ERBB2-213ENST00000582818 CLIP1P30622 1438 aa22.96■■□□□ 1.27
ERBB2-213ENST00000582818 YEATS2Q9ULM3 1422 aa22.95■■□□□ 1.26
ERBB2-213ENST00000582818 ATP1B4Q9UN42 357 aaPredicted RBP22.94■■□□□ 1.26
ERBB2-213ENST00000582818 LMTK3Q96Q04 1460 aa22.93■■□□□ 1.26
ERBB2-213ENST00000582818 ATP10AO60312 1499 aa22.92■■□□□ 1.26
ERBB2-213ENST00000582818 ZNF518AQ6AHZ1 1483 aa22.92■■□□□ 1.26
ERBB2-213ENST00000582818 SIGLEC1Q9BZZ2 1709 aa22.89■■□□□ 1.26
ERBB2-213ENST00000582818 CCDC18Q5T9S5 1454 aa22.89■■□□□ 1.25
ERBB2-213ENST00000582818 C9orf84Q5VXU9 1444 aa22.89■■□□□ 1.25
ERBB2-213ENST00000582818 FER1L4A9Z1Z3 1794 aa22.89■■□□□ 1.25
ERBB2-213ENST00000582818 KDM5CP41229 1560 aa22.88■■□□□ 1.25
ERBB2-213ENST00000582818 LRRIQ1Q96JM4 1722 aa22.88■■□□□ 1.25
ERBB2-213ENST00000582818 CASKIN1Q8WXD9 1431 aa22.87■■□□□ 1.25
ERBB2-213ENST00000582818 ARHGAP5Q13017 1502 aa22.87■■□□□ 1.25
ERBB2-213ENST00000582818 FBXO41Q8TF61 875 aa22.86■■□□□ 1.25
ERBB2-213ENST00000582818 EHMT2Q96KQ7 1210 aa22.85■■□□□ 1.25
ERBB2-213ENST00000582818 ARHGEF12Q9NZN5 1544 aa22.85■■□□□ 1.25
ERBB2-213ENST00000582818 SETD1BQ9UPS6 1966 aaKnown RBP22.83■■□□□ 1.24
ERBB2-213ENST00000582818 CDC42BPBQ9Y5S2 1711 aa22.82■■□□□ 1.24
ERBB2-213ENST00000582818 REREQ9P2R6 1566 aa22.82■■□□□ 1.24
ERBB2-213ENST00000582818 MLH3Q9UHC1 1453 aa22.8■■□□□ 1.24
ERBB2-213ENST00000582818 PREX2Q70Z35 1606 aa22.8■■□□□ 1.24
ERBB2-213ENST00000582818 FYCO1Q9BQS8 1478 aa22.79■■□□□ 1.24
ERBB2-213ENST00000582818 AFAP1Q8N556 730 aa22.77■■□□□ 1.24
ERBB2-213ENST00000582818 MLECQ14165 292 aa22.76■■□□□ 1.23
ERBB2-213ENST00000582818 DIP2CQ9Y2E4 1556 aa22.75■■□□□ 1.23
ERBB2-213ENST00000582818 PREX1Q8TCU6 1659 aa22.74■■□□□ 1.23
ERBB2-213ENST00000582818 ABCC1P33527 1531 aa22.74■■□□□ 1.23
ERBB2-213ENST00000582818 AGLP35573 1532 aa22.73■■□□□ 1.23
ERBB2-213ENST00000582818 CDC42BPAQ5VT25 1732 aa22.72■■□□□ 1.23
ERBB2-213ENST00000582818 ITSN2Q9NZM3 1697 aa22.71■■□□□ 1.23
ERBB2-213ENST00000582818 HSPA2P54652 639 aa22.7■■□□□ 1.22
ERBB2-213ENST00000582818 ABCA6Q8N139 1617 aa22.69■■□□□ 1.22
ERBB2-213ENST00000582818 MYT1LQ9UL68 1186 aa22.68■■□□□ 1.22
ERBB2-213ENST00000582818 TRAPPC8Q9Y2L5 1435 aa22.67■■□□□ 1.22
ERBB2-213ENST00000582818 PLPPR3Q6T4P5 718 aa22.66■■□□□ 1.22
ERBB2-213ENST00000582818 KIDINS220Q9ULH0 1771 aa22.66■■□□□ 1.22
ERBB2-213ENST00000582818 DMRT2Q9Y5R5 561 aa22.64■■□□□ 1.21
ERBB2-213ENST00000582818 CNTLNQ9NXG0 1405 aa22.63■■□□□ 1.21
ERBB2-213ENST00000582818 UHRF1BP1Q6BDS2 1440 aa22.62■■□□□ 1.21
ERBB2-213ENST00000582818 GPATCH8Q9UKJ3 1502 aaKnown RBP22.62■■□□□ 1.21
ERBB2-213ENST00000582818 PLEKHH2Q8IVE3 1493 aa22.61■■□□□ 1.21
ERBB2-213ENST00000582818 KIAA1107Q9UPP5 1409 aa22.61■■□□□ 1.21
ERBB2-213ENST00000582818 SAMD9LQ8IVG5 1584 aa22.6■■□□□ 1.21
ERBB2-213ENST00000582818 CEBPAP49715 358 aaPredicted RBP22.6■■□□□ 1.21
ERBB2-213ENST00000582818 ESF1Q9H501 851 aaKnown RBP22.6■■□□□ 1.21
ERBB2-213ENST00000582818 C3P01024 1663 aa22.59■■□□□ 1.21
ERBB2-213ENST00000582818 STRCQ7RTU9 1775 aa22.56■■□□□ 1.2
ERBB2-213ENST00000582818 CERKQ8TCT0 537 aa22.56■■□□□ 1.2
ERBB2-213ENST00000582818 MROH2AA6NES4 1674 aa22.55■■□□□ 1.2
ERBB2-213ENST00000582818 SYCP2Q9BX26 1530 aa22.55■■□□□ 1.2
ERBB2-213ENST00000582818 SPAG9O60271 1321 aaKnown RBP22.55■■□□□ 1.2
ERBB2-213ENST00000582818 CCNB3Q8WWL7 1395 aa22.53■■□□□ 1.2
ERBB2-213ENST00000582818 CFDP1Q9UEE9 299 aaPredicted RBP22.53■■□□□ 1.2
ERBB2-213ENST00000582818 MTUS2Q5JR59 1369 aa22.52■■□□□ 1.2
ERBB2-213ENST00000582818 NPATQ14207 1427 aa22.52■■□□□ 1.2
ERBB2-213ENST00000582818 ZNF777Q9ULD5 760 aaPredicted RBP22.52■■□□□ 1.2
ERBB2-213ENST00000582818 ATP7AQ04656 1500 aa22.51■■□□□ 1.19
ERBB2-213ENST00000582818 PTPRTO14522 1441 aa22.5■■□□□ 1.19
ERBB2-213ENST00000582818 INO80Q9ULG1 1556 aaPredicted RBP22.5■■□□□ 1.19
ERBB2-213ENST00000582818 PLXNC1O60486 1568 aa22.48■■□□□ 1.19
ERBB2-213ENST00000582818 HNRNPMP52272 730 aaKnown RBP eCLIP22.48■■□□□ 1.19
ERBB2-213ENST00000582818 PPP6R1Q9UPN7 881 aa22.48■■□□□ 1.19
ERBB2-213ENST00000582818 EHBP1L1Q8N3D4 1523 aa22.47■■□□□ 1.19
ERBB2-213ENST00000582818 SUPT6HQ7KZ85 1726 aaKnown RBP22.45■■□□□ 1.19
ERBB2-213ENST00000582818 A2MP01023 1474 aa22.45■■□□□ 1.18
ERBB2-213ENST00000582818 ADGBQ8N7X0 1667 aa22.45■■□□□ 1.18
ERBB2-213ENST00000582818 CEP162Q5TB80 1403 aa22.44■■□□□ 1.18
ERBB2-213ENST00000582818 ZMYM3Q14202 1370 aa22.43■■□□□ 1.18
ERBB2-213ENST00000582818 TIAM1Q13009 1591 aa22.42■■□□□ 1.18
ERBB2-213ENST00000582818 RTEL1-TNFRSF6BF6WH68 1400 aa22.42■■□□□ 1.18
ERBB2-213ENST00000582818 NCOA1Q15788 1441 aa22.4■■□□□ 1.18
ERBB2-213ENST00000582818 MBD5Q9P267 1494 aa22.4■■□□□ 1.18
ERBB2-213ENST00000582818 RSPH4AQ5TD94 716 aa22.38■■□□□ 1.17
ERBB2-213ENST00000582818 CLTCQ00610 1675 aaKnown RBP22.37■■□□□ 1.17
ERBB2-213ENST00000582818 IQSEC2Q5JU85 1478 aa22.36■■□□□ 1.17
ERBB2-213ENST00000582818 ZNF142P52746 1687 aaPredicted RBP22.36■■□□□ 1.17
ERBB2-213ENST00000582818 FAM135AQ9P2D6 1515 aa22.34■■□□□ 1.17
ERBB2-213ENST00000582818 CAMSAP1Q5T5Y3 1602 aa22.33■■□□□ 1.17
ERBB2-213ENST00000582818 PLA2R1Q13018 1463 aa22.33■■□□□ 1.16
ERBB2-213ENST00000582818 PTPRKQ15262 1439 aa22.32■■□□□ 1.16
ERBB2-213ENST00000582818 DHX29Q7Z478 1369 aaKnown RBP22.32■■□□□ 1.16
ERBB2-213ENST00000582818 ZNF644Q9H582 1327 aaPredicted RBP22.31■■□□□ 1.16
ERBB2-213ENST00000582818 LOC105371045A0A1W2PR82 267 aa22.31■■□□□ 1.16
ERBB2-213ENST00000582818 GGT6Q6P531 493 aa22.31■■□□□ 1.16
ERBB2-213ENST00000582818 LTBP4Q8N2S1 1624 aa22.31■■□□□ 1.16
ERBB2-213ENST00000582818 PKD2Q13563 968 aa22.3■■□□□ 1.16
ERBB2-213ENST00000582818 MYO3AQ8NEV4 1616 aa22.3■■□□□ 1.16
ERBB2-213ENST00000582818 NCOA2Q15596 1464 aa22.29■■□□□ 1.16
ERBB2-213ENST00000582818 CCDC141Q6ZP82 1450 aa22.29■■□□□ 1.16
ERBB2-213ENST00000582818 CEP170BQ9Y4F5 1589 aaPredicted RBP22.28■■□□□ 1.16
ERBB2-213ENST00000582818 ARHGEF5Q12774 1597 aa22.25■■□□□ 1.15
ERBB2-213ENST00000582818 CAMSAP2Q08AD1 1489 aa22.25■■□□□ 1.15
ERBB2-213ENST00000582818 TCOF1Q13428 1488 aaKnown RBP22.25■■□□□ 1.15
ERBB2-213ENST00000582818 A2ML1A8K2U0 1454 aa22.22■■□□□ 1.15
ERBB2-213ENST00000582818 MAP3K1Q13233 1512 aa22.21■■□□□ 1.15
ERBB2-213ENST00000582818 KDM5DQ9BY66 1539 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms