RNA–Protein interactions for RNA: ENST00000582414.1

CACNB1-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-209ENST00000582414 POGZQ7Z3K3 1410 aa27.3■■□□□ 1.96
CACNB1-209ENST00000582414 ARHGAP5Q13017 1502 aa27.27■■□□□ 1.96
CACNB1-209ENST00000582414 CEP162Q5TB80 1403 aa27.27■■□□□ 1.96
CACNB1-209ENST00000582414 CDC42BPBQ9Y5S2 1711 aa27.26■■□□□ 1.95
CACNB1-209ENST00000582414 ADAMTSL3P82987 1691 aa27.26■■□□□ 1.95
CACNB1-209ENST00000582414 ZFYVE16Q7Z3T8 1539 aa27.24■■□□□ 1.95
CACNB1-209ENST00000582414 YEATS2Q9ULM3 1422 aa27.23■■□□□ 1.95
CACNB1-209ENST00000582414 PREX2Q70Z35 1606 aa27.23■■□□□ 1.95
CACNB1-209ENST00000582414 BCORL1Q5H9F3 1711 aa27.22■■□□□ 1.95
CACNB1-209ENST00000582414 ARID4BQ4LE39 1312 aaPredicted RBP27.21■■□□□ 1.95
CACNB1-209ENST00000582414 ZNF518AQ6AHZ1 1483 aa27.19■■□□□ 1.94
CACNB1-209ENST00000582414 LOC105371045A0A1W2PR82 267 aa27.18■■□□□ 1.94
CACNB1-209ENST00000582414 CDC42BPAQ5VT25 1732 aa27.18■■□□□ 1.94
CACNB1-209ENST00000582414 AFAP1Q8N556 730 aa27.16■■□□□ 1.94
CACNB1-209ENST00000582414 KDM5CP41229 1560 aa27.16■■□□□ 1.94
CACNB1-209ENST00000582414 ATP10AO60312 1499 aa27.14■■□□□ 1.94
CACNB1-209ENST00000582414 PTPRMP28827 1452 aa27.14■■□□□ 1.94
CACNB1-209ENST00000582414 GPATCH8Q9UKJ3 1502 aaKnown RBP27.13■■□□□ 1.93
CACNB1-209ENST00000582414 SIGLEC1Q9BZZ2 1709 aa27.13■■□□□ 1.93
CACNB1-209ENST00000582414 ABCC1P33527 1531 aa27.12■■□□□ 1.93
CACNB1-209ENST00000582414 ARHGEF12Q9NZN5 1544 aa27.11■■□□□ 1.93
CACNB1-209ENST00000582414 MTUS2Q5JR59 1369 aa27.11■■□□□ 1.93
CACNB1-209ENST00000582414 MADDQ8WXG6 1647 aa27.11■■□□□ 1.93
CACNB1-209ENST00000582414 C9orf84Q5VXU9 1444 aa27.08■■□□□ 1.93
CACNB1-209ENST00000582414 TRAPPC8Q9Y2L5 1435 aa27.08■■□□□ 1.93
CACNB1-209ENST00000582414 MLH3Q9UHC1 1453 aa27.08■■□□□ 1.93
CACNB1-209ENST00000582414 ITSN2Q9NZM3 1697 aa27.08■■□□□ 1.92
CACNB1-209ENST00000582414 HECW2Q9P2P5 1572 aa27.07■■□□□ 1.92
CACNB1-209ENST00000582414 CCNB3Q8WWL7 1395 aa27.05■■□□□ 1.92
CACNB1-209ENST00000582414 EHBP1L1Q8N3D4 1523 aa27.04■■□□□ 1.92
CACNB1-209ENST00000582414 SAMD9LQ8IVG5 1584 aa27.04■■□□□ 1.92
CACNB1-209ENST00000582414 CFDP1Q9UEE9 299 aaPredicted RBP27.03■■□□□ 1.92
CACNB1-209ENST00000582414 ZNF777Q9ULD5 760 aaPredicted RBP27.03■■□□□ 1.92
CACNB1-209ENST00000582414 DIP2CQ9Y2E4 1556 aa27.01■■□□□ 1.92
CACNB1-209ENST00000582414 RIMS1Q86UR5 1692 aaKnown RBP27.01■■□□□ 1.91
CACNB1-209ENST00000582414 KIAA1107Q9UPP5 1409 aa27■■□□□ 1.91
CACNB1-209ENST00000582414 REREQ9P2R6 1566 aa27■■□□□ 1.91
CACNB1-209ENST00000582414 VPS8Q8N3P4 1428 aa26.99■■□□□ 1.91
CACNB1-209ENST00000582414 MYT1LQ9UL68 1186 aa26.99■■□□□ 1.91
CACNB1-209ENST00000582414 MLECQ14165 292 aa26.98■■□□□ 1.91
CACNB1-209ENST00000582414 PLEKHH2Q8IVE3 1493 aa26.98■■□□□ 1.91
CACNB1-209ENST00000582414 ABCA6Q8N139 1617 aa26.97■■□□□ 1.91
CACNB1-209ENST00000582414 SYCP2Q9BX26 1530 aa26.96■■□□□ 1.91
CACNB1-209ENST00000582414 HNRNPMP52272 730 aaKnown RBP eCLIP26.96■■□□□ 1.91
CACNB1-209ENST00000582414 KIDINS220Q9ULH0 1771 aa26.96■■□□□ 1.91
CACNB1-209ENST00000582414 TIAM1Q13009 1591 aa26.96■■□□□ 1.91
CACNB1-209ENST00000582414 FER1L4A9Z1Z3 1794 aa26.93■■□□□ 1.9
CACNB1-209ENST00000582414 AGLP35573 1532 aa26.91■■□□□ 1.9
CACNB1-209ENST00000582414 SPAG9O60271 1321 aaKnown RBP26.9■■□□□ 1.9
CACNB1-209ENST00000582414 NCOA2Q15596 1464 aa26.89■■□□□ 1.9
CACNB1-209ENST00000582414 SUPT6HQ7KZ85 1726 aaKnown RBP26.89■■□□□ 1.9
CACNB1-209ENST00000582414 MAP3K1Q13233 1512 aa26.87■■□□□ 1.89
CACNB1-209ENST00000582414 ZNF644Q9H582 1327 aaPredicted RBP26.87■■□□□ 1.89
CACNB1-209ENST00000582414 LRRC9Q6ZRR7 1453 aa26.85■■□□□ 1.89
CACNB1-209ENST00000582414 MBD5Q9P267 1494 aa26.85■■□□□ 1.89
CACNB1-209ENST00000582414 LMTK3Q96Q04 1460 aa26.84■■□□□ 1.89
CACNB1-209ENST00000582414 ATP7AQ04656 1500 aa26.83■■□□□ 1.89
CACNB1-209ENST00000582414 INO80Q9ULG1 1556 aaPredicted RBP26.82■■□□□ 1.88
CACNB1-209ENST00000582414 PLPPR3Q6T4P5 718 aa26.79■■□□□ 1.88
CACNB1-209ENST00000582414 KANK4Q5T7N3 995 aaPredicted RBP26.77■■□□□ 1.88
CACNB1-209ENST00000582414 RTEL1-TNFRSF6BF6WH68 1400 aa26.76■■□□□ 1.87
CACNB1-209ENST00000582414 CEBPAP49715 358 aaPredicted RBP26.76■■□□□ 1.87
CACNB1-209ENST00000582414 RSPH4AQ5TD94 716 aa26.76■■□□□ 1.87
CACNB1-209ENST00000582414 A2MP01023 1474 aa26.74■■□□□ 1.87
CACNB1-209ENST00000582414 PLXNC1O60486 1568 aa26.74■■□□□ 1.87
CACNB1-209ENST00000582414 CAMSAP2Q08AD1 1489 aa26.74■■□□□ 1.87
CACNB1-209ENST00000582414 ESF1Q9H501 851 aaKnown RBP26.71■■□□□ 1.87
CACNB1-209ENST00000582414 CNTLNQ9NXG0 1405 aa26.71■■□□□ 1.87
CACNB1-209ENST00000582414 SETD1BQ9UPS6 1966 aaKnown RBP26.71■■□□□ 1.87
CACNB1-209ENST00000582414 ADGBQ8N7X0 1667 aa26.7■■□□□ 1.87
CACNB1-209ENST00000582414 CCDC141Q6ZP82 1450 aa26.7■■□□□ 1.87
CACNB1-209ENST00000582414 ARHGEF5Q12774 1597 aa26.67■■□□□ 1.86
CACNB1-209ENST00000582414 C3P01024 1663 aa26.67■■□□□ 1.86
CACNB1-209ENST00000582414 HSPA2P54652 639 aa26.67■■□□□ 1.86
CACNB1-209ENST00000582414 PREX1Q8TCU6 1659 aa26.66■■□□□ 1.86
CACNB1-209ENST00000582414 APLP2Q06481 763 aa26.65■■□□□ 1.86
CACNB1-209ENST00000582414 DHX29Q7Z478 1369 aaKnown RBP26.65■■□□□ 1.86
CACNB1-209ENST00000582414 MIA2Q96PC5 1412 aa26.65■■□□□ 1.86
CACNB1-209ENST00000582414 PPP6R1Q9UPN7 881 aa26.64■■□□□ 1.86
CACNB1-209ENST00000582414 MYOM3Q5VTT5 1437 aa26.64■■□□□ 1.85
CACNB1-209ENST00000582414 MROH2AA6NES4 1674 aa26.62■■□□□ 1.85
CACNB1-209ENST00000582414 TSPY4P0CV99 314 aa26.6■■□□□ 1.85
CACNB1-209ENST00000582414 TSPY10P0CW01 314 aa26.6■■□□□ 1.85
CACNB1-209ENST00000582414 ZMYM3Q14202 1370 aa26.59■■□□□ 1.85
CACNB1-209ENST00000582414 GGT6Q6P531 493 aa26.59■■□□□ 1.85
CACNB1-209ENST00000582414 UHRF1BP1Q6BDS2 1440 aa26.58■■□□□ 1.85
CACNB1-209ENST00000582414 NPATQ14207 1427 aa26.56■■□□□ 1.84
CACNB1-209ENST00000582414 CLTCQ00610 1675 aaKnown RBP26.54■■□□□ 1.84
CACNB1-209ENST00000582414 MAST1Q9Y2H9 1570 aa26.54■■□□□ 1.84
CACNB1-209ENST00000582414 ILDR1Q86SU0 546 aaPredicted RBP26.51■■□□□ 1.83
CACNB1-209ENST00000582414 KIF3BO15066 747 aa26.5■■□□□ 1.83
CACNB1-209ENST00000582414 PTPRKQ15262 1439 aa26.47■■□□□ 1.83
CACNB1-209ENST00000582414 FAM135AQ9P2D6 1515 aa26.46■■□□□ 1.83
CACNB1-209ENST00000582414 STRCQ7RTU9 1775 aa26.45■■□□□ 1.82
CACNB1-209ENST00000582414 PTPN23Q9H3S7 1636 aa26.44■■□□□ 1.82
CACNB1-209ENST00000582414 FGD6Q6ZV73 1430 aa26.43■■□□□ 1.82
CACNB1-209ENST00000582414 DMRT2Q9Y5R5 561 aa26.43■■□□□ 1.82
CACNB1-209ENST00000582414 TCOF1Q13428 1488 aaKnown RBP26.42■■□□□ 1.82
CACNB1-209ENST00000582414 ABCC5O15440 1437 aa26.41■■□□□ 1.82
CACNB1-209ENST00000582414 KDM5DQ9BY66 1539 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms