RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 PPRC1Q5VV67 1664 aaKnown RBP17.72■□□□□ 0.43
GGA3-211ENST00000582232 FGD6Q6ZV73 1430 aa17.72■□□□□ 0.43
GGA3-211ENST00000582232 CFDP1Q9UEE9 299 aaPredicted RBP17.71■□□□□ 0.43
GGA3-211ENST00000582232 ARHGAP5Q13017 1502 aa17.71■□□□□ 0.43
GGA3-211ENST00000582232 CFAP74Q9C0B2 1584 aa17.7■□□□□ 0.42
GGA3-211ENST00000582232 EFCAB2Q5VUJ9 269 aa17.7■□□□□ 0.42
GGA3-211ENST00000582232 RRBP1Q9P2E9 1410 aaKnown RBP17.69■□□□□ 0.42
GGA3-211ENST00000582232 TSPOAP1O95153 1857 aa17.69■□□□□ 0.42
GGA3-211ENST00000582232 FANCAO15360 1455 aa17.69■□□□□ 0.42
GGA3-211ENST00000582232 TEX14Q8IWB6 1497 aa17.69■□□□□ 0.42
GGA3-211ENST00000582232 NEO1Q92859 1461 aa17.69■□□□□ 0.42
GGA3-211ENST00000582232 TCOF1Q13428 1488 aaKnown RBP17.68■□□□□ 0.42
GGA3-211ENST00000582232 PTPN23Q9H3S7 1636 aa17.67■□□□□ 0.42
GGA3-211ENST00000582232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.66■□□□□ 0.42
GGA3-211ENST00000582232 SAMD9LQ8IVG5 1584 aa17.66■□□□□ 0.42
GGA3-211ENST00000582232 PLEKHH2Q8IVE3 1493 aa17.65■□□□□ 0.42
GGA3-211ENST00000582232 CAMSAP2Q08AD1 1489 aa17.64■□□□□ 0.41
GGA3-211ENST00000582232 AKNAQ7Z591 1439 aa17.64■□□□□ 0.41
GGA3-211ENST00000582232 KIAA1107Q9UPP5 1409 aa17.64■□□□□ 0.41
GGA3-211ENST00000582232 ABCC1P33527 1531 aa17.62■□□□□ 0.41
GGA3-211ENST00000582232 ZNF644Q9H582 1327 aaPredicted RBP17.61■□□□□ 0.41
GGA3-211ENST00000582232 ZNF777Q9ULD5 760 aaPredicted RBP17.6■□□□□ 0.41
GGA3-211ENST00000582232 ADGRL1O94910 1474 aa17.6■□□□□ 0.41
GGA3-211ENST00000582232 ARHGEF5Q12774 1597 aa17.59■□□□□ 0.41
GGA3-211ENST00000582232 MBD5Q9P267 1494 aa17.59■□□□□ 0.41
GGA3-211ENST00000582232 ARHGEF12Q9NZN5 1544 aa17.58■□□□□ 0.41
GGA3-211ENST00000582232 RSPH4AQ5TD94 716 aa17.58■□□□□ 0.4
GGA3-211ENST00000582232 SYCP2Q9BX26 1530 aa17.57■□□□□ 0.4
GGA3-211ENST00000582232 SCAPERQ9BY12 1400 aa17.56■□□□□ 0.4
GGA3-211ENST00000582232 DNMT1P26358 1616 aaKnown RBP17.56■□□□□ 0.4
GGA3-211ENST00000582232 FAM50AQ14320 339 aaKnown RBP17.55■□□□□ 0.4
GGA3-211ENST00000582232 HNRNPMP52272 730 aaKnown RBP eCLIP17.54■□□□□ 0.4
GGA3-211ENST00000582232 DENND4BO75064 1496 aaPredicted RBP17.54■□□□□ 0.4
GGA3-211ENST00000582232 RICTORQ6R327 1708 aa17.53■□□□□ 0.4
GGA3-211ENST00000582232 CCDC141Q6ZP82 1450 aa17.53■□□□□ 0.4
GGA3-211ENST00000582232 POGZQ7Z3K3 1410 aa17.53■□□□□ 0.4
GGA3-211ENST00000582232 TRAPPC8Q9Y2L5 1435 aa17.53■□□□□ 0.4
GGA3-211ENST00000582232 ZNF518AQ6AHZ1 1483 aa17.52■□□□□ 0.4
GGA3-211ENST00000582232 TRIM26Q12899 539 aaPredicted RBP17.52■□□□□ 0.4
GGA3-211ENST00000582232 ABCC5O15440 1437 aa17.52■□□□□ 0.4
GGA3-211ENST00000582232 DAPK1P53355 1430 aa17.52■□□□□ 0.4
GGA3-211ENST00000582232 CROCC2H7BZ55 1655 aa17.52■□□□□ 0.39
GGA3-211ENST00000582232 KDM5CP41229 1560 aa17.51■□□□□ 0.39
GGA3-211ENST00000582232 COL17A1Q9UMD9 1497 aaPredicted RBP17.5■□□□□ 0.39
GGA3-211ENST00000582232 SHANK2Q9UPX8 1470 aa17.5■□□□□ 0.39
GGA3-211ENST00000582232 FRMPD1Q5SYB0 1578 aa17.49■□□□□ 0.39
GGA3-211ENST00000582232 MAST1Q9Y2H9 1570 aa17.49■□□□□ 0.39
GGA3-211ENST00000582232 AFAP1Q8N556 730 aa17.48■□□□□ 0.39
GGA3-211ENST00000582232 ZMYM4Q5VZL5 1548 aa17.47■□□□□ 0.39
GGA3-211ENST00000582232 KDM6BO15054 1643 aa17.47■□□□□ 0.39
GGA3-211ENST00000582232 RTEL1-TNFRSF6BF6WH68 1400 aa17.47■□□□□ 0.39
GGA3-211ENST00000582232 PTPRKQ15262 1439 aa17.47■□□□□ 0.39
GGA3-211ENST00000582232 MLH3Q9UHC1 1453 aa17.46■□□□□ 0.39
GGA3-211ENST00000582232 RAPGEF3O95398 923 aa17.46■□□□□ 0.39
GGA3-211ENST00000582232 TSPY4P0CV99 314 aa17.46■□□□□ 0.39
GGA3-211ENST00000582232 TSPY10P0CW01 314 aa17.46■□□□□ 0.39
GGA3-211ENST00000582232 C9orf84Q5VXU9 1444 aa17.45■□□□□ 0.38
GGA3-211ENST00000582232 INO80Q9ULG1 1556 aaPredicted RBP17.45■□□□□ 0.38
GGA3-211ENST00000582232 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
GGA3-211ENST00000582232 ADGBQ8N7X0 1667 aa17.44■□□□□ 0.38
GGA3-211ENST00000582232 HECW2Q9P2P5 1572 aa17.44■□□□□ 0.38
GGA3-211ENST00000582232 SPAG9O60271 1321 aaKnown RBP17.44■□□□□ 0.38
GGA3-211ENST00000582232 MAGI2Q86UL8 1455 aa17.44■□□□□ 0.38
GGA3-211ENST00000582232 ROCK1Q13464 1354 aa17.43■□□□□ 0.38
GGA3-211ENST00000582232 KIDINS220Q9ULH0 1771 aa17.43■□□□□ 0.38
GGA3-211ENST00000582232 ATP7AQ04656 1500 aa17.42■□□□□ 0.38
GGA3-211ENST00000582232 ZFYVE16Q7Z3T8 1539 aa17.42■□□□□ 0.38
GGA3-211ENST00000582232 PLXNC1O60486 1568 aa17.41■□□□□ 0.38
GGA3-211ENST00000582232 NCOA1Q15788 1441 aa17.4■□□□□ 0.38
GGA3-211ENST00000582232 ITGAEP38570 1179 aa17.4■□□□□ 0.38
GGA3-211ENST00000582232 ANKRD30AQ9BXX3 1397 aa17.39■□□□□ 0.37
GGA3-211ENST00000582232 CHIC2Q9UKJ5 165 aa17.37■□□□□ 0.37
GGA3-211ENST00000582232 HFM1A2PYH4 1435 aa17.35■□□□□ 0.37
GGA3-211ENST00000582232 DIP2CQ9Y2E4 1556 aa17.35■□□□□ 0.37
GGA3-211ENST00000582232 ABCA6Q8N139 1617 aa17.35■□□□□ 0.37
GGA3-211ENST00000582232 ARHGEF40Q8TER5 1519 aa17.34■□□□□ 0.37
GGA3-211ENST00000582232 YEATS2Q9ULM3 1422 aa17.34■□□□□ 0.37
GGA3-211ENST00000582232 GCC2Q8IWJ2 1684 aa17.33■□□□□ 0.37
GGA3-211ENST00000582232 DUOX2Q9NRD8 1548 aa17.33■□□□□ 0.37
GGA3-211ENST00000582232 KIF15Q9NS87 1388 aa17.33■□□□□ 0.36
GGA3-211ENST00000582232 REREQ9P2R6 1566 aa17.32■□□□□ 0.36
GGA3-211ENST00000582232 NAIPQ13075 1403 aa17.32■□□□□ 0.36
GGA3-211ENST00000582232 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
GGA3-211ENST00000582232 ATP10AO60312 1499 aa17.31■□□□□ 0.36
GGA3-211ENST00000582232 RRP7BPQ9NSQ0 103 aa17.31■□□□□ 0.36
GGA3-211ENST00000582232 MYT1LQ9UL68 1186 aa17.31■□□□□ 0.36
GGA3-211ENST00000582232 DHX29Q7Z478 1369 aaKnown RBP17.3■□□□□ 0.36
GGA3-211ENST00000582232 A2MP01023 1474 aa17.3■□□□□ 0.36
GGA3-211ENST00000582232 PCGF6Q9BYE7 350 aa17.29■□□□□ 0.36
GGA3-211ENST00000582232 ERBINQ96RT1 1412 aa17.29■□□□□ 0.36
GGA3-211ENST00000582232 SETD5Q9C0A6 1442 aa17.28■□□□□ 0.36
GGA3-211ENST00000582232 BCORL1Q5H9F3 1711 aa17.27■□□□□ 0.36
GGA3-211ENST00000582232 EIF2AK4Q9P2K8 1649 aaKnown RBP17.27■□□□□ 0.36
GGA3-211ENST00000582232 ANKRD50Q9ULJ7 1429 aa17.27■□□□□ 0.35
GGA3-211ENST00000582232 AGLP35573 1532 aa17.26■□□□□ 0.35
GGA3-211ENST00000582232 HRCP23327 699 aa17.25■□□□□ 0.35
GGA3-211ENST00000582232 ACIN1Q9UKV3 1341 aaKnown RBP17.23■□□□□ 0.35
GGA3-211ENST00000582232 SIGLEC1Q9BZZ2 1709 aa17.21■□□□□ 0.35
GGA3-211ENST00000582232 RAB3GAP2Q9H2M9 1393 aa17.2■□□□□ 0.34
GGA3-211ENST00000582232 DEPDC5O75140 1603 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms