RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 POGZQ7Z3K3 1410 aa36.24■■■■□ 3.39
CASC3-207ENST00000581849 SCAPERQ9BY12 1400 aa36.24■■■■□ 3.39
CASC3-207ENST00000581849 BCORL1Q5H9F3 1711 aa36.2■■■■□ 3.39
CASC3-207ENST00000581849 ZFYVE16Q7Z3T8 1539 aa36.2■■■■□ 3.39
CASC3-207ENST00000581849 ARHGAP5Q13017 1502 aa36.18■■■■□ 3.38
CASC3-207ENST00000581849 PREX2Q70Z35 1606 aa36.12■■■■□ 3.37
CASC3-207ENST00000581849 ARID4BQ4LE39 1312 aaPredicted RBP36.11■■■■□ 3.37
CASC3-207ENST00000581849 YEATS2Q9ULM3 1422 aa36.11■■■■□ 3.37
CASC3-207ENST00000581849 CDC42BPBQ9Y5S2 1711 aa36.11■■■■□ 3.37
CASC3-207ENST00000581849 ZNF518AQ6AHZ1 1483 aa36.1■■■■□ 3.37
CASC3-207ENST00000581849 HECW2Q9P2P5 1572 aa36.1■■■■□ 3.37
CASC3-207ENST00000581849 PTPRMP28827 1452 aa36.09■■■■□ 3.37
CASC3-207ENST00000581849 MADDQ8WXG6 1647 aa36.06■■■■□ 3.36
CASC3-207ENST00000581849 KDM5CP41229 1560 aa36.06■■■■□ 3.36
CASC3-207ENST00000581849 CEP162Q5TB80 1403 aa36■■■■□ 3.35
CASC3-207ENST00000581849 CDC42BPAQ5VT25 1732 aa36■■■■□ 3.35
CASC3-207ENST00000581849 ATP10AO60312 1499 aa36■■■■□ 3.35
CASC3-207ENST00000581849 ABCC1P33527 1531 aa35.98■■■■□ 3.35
CASC3-207ENST00000581849 SIGLEC1Q9BZZ2 1709 aa35.98■■■■□ 3.35
CASC3-207ENST00000581849 C9orf84Q5VXU9 1444 aa35.98■■■■□ 3.35
CASC3-207ENST00000581849 RIMS1Q86UR5 1692 aaKnown RBP35.92■■■■□ 3.34
CASC3-207ENST00000581849 ITSN2Q9NZM3 1697 aa35.92■■■■□ 3.34
CASC3-207ENST00000581849 AFAP1Q8N556 730 aa35.92■■■■□ 3.34
CASC3-207ENST00000581849 MLH3Q9UHC1 1453 aa35.92■■■■□ 3.34
CASC3-207ENST00000581849 GPATCH8Q9UKJ3 1502 aaKnown RBP35.89■■■■□ 3.34
CASC3-207ENST00000581849 ARHGEF12Q9NZN5 1544 aa35.88■■■■□ 3.33
CASC3-207ENST00000581849 REREQ9P2R6 1566 aa35.88■■■■□ 3.33
CASC3-207ENST00000581849 MTUS2Q5JR59 1369 aa35.88■■■■□ 3.33
CASC3-207ENST00000581849 DIP2CQ9Y2E4 1556 aa35.85■■■■□ 3.33
CASC3-207ENST00000581849 TRAPPC8Q9Y2L5 1435 aa35.85■■■■□ 3.33
CASC3-207ENST00000581849 EHBP1L1Q8N3D4 1523 aa35.83■■■■□ 3.33
CASC3-207ENST00000581849 FER1L4A9Z1Z3 1794 aa35.82■■■■□ 3.33
CASC3-207ENST00000581849 SAMD9LQ8IVG5 1584 aa35.82■■■■□ 3.32
CASC3-207ENST00000581849 ABCA6Q8N139 1617 aa35.79■■■■□ 3.32
CASC3-207ENST00000581849 CCNB3Q8WWL7 1395 aa35.79■■■■□ 3.32
CASC3-207ENST00000581849 PLEKHH2Q8IVE3 1493 aa35.79■■■■□ 3.32
CASC3-207ENST00000581849 KIAA1107Q9UPP5 1409 aa35.77■■■■□ 3.32
CASC3-207ENST00000581849 MYT1LQ9UL68 1186 aa35.76■■■■□ 3.32
CASC3-207ENST00000581849 MLECQ14165 292 aa35.75■■■■□ 3.31
CASC3-207ENST00000581849 KIDINS220Q9ULH0 1771 aa35.74■■■■□ 3.31
CASC3-207ENST00000581849 AGLP35573 1532 aa35.74■■■■□ 3.31
CASC3-207ENST00000581849 SYCP2Q9BX26 1530 aa35.74■■■■□ 3.31
CASC3-207ENST00000581849 CFDP1Q9UEE9 299 aaPredicted RBP35.73■■■■□ 3.31
CASC3-207ENST00000581849 ZNF777Q9ULD5 760 aaPredicted RBP35.72■■■■□ 3.31
CASC3-207ENST00000581849 LMTK3Q96Q04 1460 aa35.71■■■■□ 3.31
CASC3-207ENST00000581849 TIAM1Q13009 1591 aa35.7■■■■□ 3.31
CASC3-207ENST00000581849 VPS8Q8N3P4 1428 aa35.66■■■■□ 3.3
CASC3-207ENST00000581849 LOC105371045A0A1W2PR82 267 aa35.65■■■■□ 3.3
CASC3-207ENST00000581849 SPAG9O60271 1321 aaKnown RBP35.62■■■■□ 3.29
CASC3-207ENST00000581849 HNRNPMP52272 730 aaKnown RBP eCLIP35.61■■■■□ 3.295e-6■■■■□ 21
CASC3-207ENST00000581849 SUPT6HQ7KZ85 1726 aaKnown RBP35.6■■■■□ 3.29
CASC3-207ENST00000581849 INO80Q9ULG1 1556 aaPredicted RBP35.59■■■■□ 3.29
CASC3-207ENST00000581849 ATP7AQ04656 1500 aa35.59■■■■□ 3.29
CASC3-207ENST00000581849 NCOA2Q15596 1464 aa35.56■■■■□ 3.28
CASC3-207ENST00000581849 PLPPR3Q6T4P5 718 aa35.52■■■■□ 3.28
CASC3-207ENST00000581849 MBD5Q9P267 1494 aa35.52■■■■□ 3.28
CASC3-207ENST00000581849 MAP3K1Q13233 1512 aa35.52■■■■□ 3.28
CASC3-207ENST00000581849 PREX1Q8TCU6 1659 aa35.49■■■■□ 3.27
CASC3-207ENST00000581849 CNTLNQ9NXG0 1405 aa35.49■■■■□ 3.27
CASC3-207ENST00000581849 PLXNC1O60486 1568 aa35.49■■■■□ 3.27
CASC3-207ENST00000581849 LRRC9Q6ZRR7 1453 aa35.48■■■■□ 3.27
CASC3-207ENST00000581849 ZNF644Q9H582 1327 aaPredicted RBP35.47■■■■□ 3.27
CASC3-207ENST00000581849 SETD1BQ9UPS6 1966 aaKnown RBP35.46■■■■□ 3.27
CASC3-207ENST00000581849 A2MP01023 1474 aa35.46■■■■□ 3.27
CASC3-207ENST00000581849 ESF1Q9H501 851 aaKnown RBP35.45■■■■□ 3.27
CASC3-207ENST00000581849 RTEL1-TNFRSF6BF6WH68 1400 aa35.45■■■■□ 3.27
CASC3-207ENST00000581849 C3P01024 1663 aa35.43■■■■□ 3.26
CASC3-207ENST00000581849 ADGBQ8N7X0 1667 aa35.43■■■■□ 3.26
CASC3-207ENST00000581849 CEBPAP49715 358 aaPredicted RBP35.43■■■■□ 3.26
CASC3-207ENST00000581849 CAMSAP2Q08AD1 1489 aa35.41■■■■□ 3.26
CASC3-207ENST00000581849 HSPA2P54652 639 aa35.4■■■■□ 3.26
CASC3-207ENST00000581849 RSPH4AQ5TD94 716 aa35.4■■■■□ 3.26
CASC3-207ENST00000581849 CCDC141Q6ZP82 1450 aa35.39■■■■□ 3.26
CASC3-207ENST00000581849 MROH2AA6NES4 1674 aa35.39■■■■□ 3.26
CASC3-207ENST00000581849 UHRF1BP1Q6BDS2 1440 aa35.36■■■■□ 3.25
CASC3-207ENST00000581849 ILDR1Q86SU0 546 aaPredicted RBP35.35■■■■□ 3.25
CASC3-207ENST00000581849 ARHGEF5Q12774 1597 aa35.34■■■■□ 3.25
CASC3-207ENST00000581849 PPP6R1Q9UPN7 881 aa35.3■■■■□ 3.24
CASC3-207ENST00000581849 NPATQ14207 1427 aa35.28■■■■□ 3.24
CASC3-207ENST00000581849 DHX29Q7Z478 1369 aaKnown RBP35.26■■■■□ 3.24
CASC3-207ENST00000581849 KANK4Q5T7N3 995 aaPredicted RBP35.26■■■■□ 3.24
CASC3-207ENST00000581849 MIA2Q96PC5 1412 aa35.25■■■■□ 3.23
CASC3-207ENST00000581849 ZMYM3Q14202 1370 aa35.25■■■■□ 3.23
CASC3-207ENST00000581849 CLTCQ00610 1675 aaKnown RBP35.22■■■■□ 3.23
CASC3-207ENST00000581849 MYOM3Q5VTT5 1437 aa35.22■■■■□ 3.23
CASC3-207ENST00000581849 TSPY4P0CV99 314 aa35.18■■■■□ 3.22
CASC3-207ENST00000581849 TSPY10P0CW01 314 aa35.18■■■■□ 3.22
CASC3-207ENST00000581849 GGT6Q6P531 493 aa35.18■■■■□ 3.22
CASC3-207ENST00000581849 FAM135AQ9P2D6 1515 aa35.17■■■■□ 3.22
CASC3-207ENST00000581849 MAST1Q9Y2H9 1570 aa35.17■■■■□ 3.22
CASC3-207ENST00000581849 APLP2Q06481 763 aa35.16■■■■□ 3.22
CASC3-207ENST00000581849 STRCQ7RTU9 1775 aa35.14■■■■□ 3.22
CASC3-207ENST00000581849 DMRT2Q9Y5R5 561 aa35.13■■■■□ 3.21
CASC3-207ENST00000581849 PTPRKQ15262 1439 aa35.1■■■■□ 3.21
CASC3-207ENST00000581849 FBXO41Q8TF61 875 aa35.1■■■■□ 3.21
CASC3-207ENST00000581849 KIF3BO15066 747 aa35.07■■■■□ 3.2
CASC3-207ENST00000581849 KDM5DQ9BY66 1539 aa35.04■■■■□ 3.2
CASC3-207ENST00000581849 ZNF142P52746 1687 aaPredicted RBP35.04■■■■□ 3.2
CASC3-207ENST00000581849 MYO3AQ8NEV4 1616 aa35.03■■■■□ 3.2
CASC3-207ENST00000581849 PTPRTO14522 1441 aa35.03■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms