RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 CCNB3Q8WWL7 1395 aa24.91■■□□□ 1.58
CCDC57-213ENST00000581625 ARHGAP5Q13017 1502 aa24.9■■□□□ 1.58
CCDC57-213ENST00000581625 GPATCH8Q9UKJ3 1502 aaKnown RBP24.89■■□□□ 1.57
CCDC57-213ENST00000581625 CDC42BPBQ9Y5S2 1711 aa24.87■■□□□ 1.57
CCDC57-213ENST00000581625 KDM6BO15054 1643 aa24.86■■□□□ 1.57
CCDC57-213ENST00000581625 EFCAB2Q5VUJ9 269 aa24.83■■□□□ 1.57
CCDC57-213ENST00000581625 AKNAQ7Z591 1439 aa24.82■■□□□ 1.56
CCDC57-213ENST00000581625 MYOM3Q5VTT5 1437 aa24.79■■□□□ 1.56
CCDC57-213ENST00000581625 ADGRL1O94910 1474 aa24.79■■□□□ 1.56
CCDC57-213ENST00000581625 CFDP1Q9UEE9 299 aaPredicted RBP24.78■■□□□ 1.56
CCDC57-213ENST00000581625 ABCC1P33527 1531 aa24.77■■□□□ 1.56
CCDC57-213ENST00000581625 PLEKHH2Q8IVE3 1493 aa24.77■■□□□ 1.56
CCDC57-213ENST00000581625 SAMD9LQ8IVG5 1584 aa24.76■■□□□ 1.55
CCDC57-213ENST00000581625 MIA2Q96PC5 1412 aa24.76■■□□□ 1.55
CCDC57-213ENST00000581625 DENND4BO75064 1496 aaPredicted RBP24.74■■□□□ 1.55
CCDC57-213ENST00000581625 COL17A1Q9UMD9 1497 aaPredicted RBP24.73■■□□□ 1.55
CCDC57-213ENST00000581625 SCAPERQ9BY12 1400 aa24.71■■□□□ 1.55
CCDC57-213ENST00000581625 POGZQ7Z3K3 1410 aa24.7■■□□□ 1.55
CCDC57-213ENST00000581625 KIAA1107Q9UPP5 1409 aa24.7■■□□□ 1.55
CCDC57-213ENST00000581625 CAMSAP2Q08AD1 1489 aa24.7■■□□□ 1.54
CCDC57-213ENST00000581625 RICTORQ6R327 1708 aa24.69■■□□□ 1.54
CCDC57-213ENST00000581625 FRMPD1Q5SYB0 1578 aa24.69■■□□□ 1.54
CCDC57-213ENST00000581625 SYCP2Q9BX26 1530 aa24.69■■□□□ 1.54
CCDC57-213ENST00000581625 ZNF518AQ6AHZ1 1483 aa24.69■■□□□ 1.54
CCDC57-213ENST00000581625 FGD6Q6ZV73 1430 aa24.69■■□□□ 1.54
CCDC57-213ENST00000581625 ZNF777Q9ULD5 760 aaPredicted RBP24.68■■□□□ 1.54
CCDC57-213ENST00000581625 ZMYM4Q5VZL5 1548 aa24.66■■□□□ 1.54
CCDC57-213ENST00000581625 KDM5CP41229 1560 aa24.64■■□□□ 1.54
CCDC57-213ENST00000581625 ARHGEF12Q9NZN5 1544 aa24.64■■□□□ 1.53
CCDC57-213ENST00000581625 PTPN23Q9H3S7 1636 aa24.64■■□□□ 1.53
CCDC57-213ENST00000581625 TCOF1Q13428 1488 aaKnown RBP24.63■■□□□ 1.53
CCDC57-213ENST00000581625 PPARGC1BQ86YN6 1023 aaKnown RBP24.61■■□□□ 1.53
CCDC57-213ENST00000581625 ARHGEF5Q12774 1597 aa24.6■■□□□ 1.53
CCDC57-213ENST00000581625 MBD5Q9P267 1494 aa24.6■■□□□ 1.53
CCDC57-213ENST00000581625 RAPGEF3O95398 923 aa24.6■■□□□ 1.53
CCDC57-213ENST00000581625 ZNF644Q9H582 1327 aaPredicted RBP24.6■■□□□ 1.53
CCDC57-213ENST00000581625 MAGI2Q86UL8 1455 aa24.59■■□□□ 1.53
CCDC57-213ENST00000581625 TRAPPC8Q9Y2L5 1435 aa24.59■■□□□ 1.53
CCDC57-213ENST00000581625 CCDC141Q6ZP82 1450 aa24.58■■□□□ 1.52
CCDC57-213ENST00000581625 HECW2Q9P2P5 1572 aa24.57■■□□□ 1.52
CCDC57-213ENST00000581625 RSPH4AQ5TD94 716 aa24.55■■□□□ 1.52
CCDC57-213ENST00000581625 ARHGEF40Q8TER5 1519 aa24.55■■□□□ 1.52
CCDC57-213ENST00000581625 MLH3Q9UHC1 1453 aa24.54■■□□□ 1.52
CCDC57-213ENST00000581625 HNRNPMP52272 730 aaKnown RBP eCLIP24.54■■□□□ 1.521e-6■■■■□ 23.2
CCDC57-213ENST00000581625 ZFYVE16Q7Z3T8 1539 aa24.53■■□□□ 1.52
CCDC57-213ENST00000581625 AFAP1Q8N556 730 aa24.52■■□□□ 1.52
CCDC57-213ENST00000581625 INO80Q9ULG1 1556 aaPredicted RBP24.51■■□□□ 1.51
CCDC57-213ENST00000581625 RRBP1Q9P2E9 1410 aaKnown RBP24.51■■□□□ 1.51
CCDC57-213ENST00000581625 DNMT1P26358 1616 aaKnown RBP24.5■■□□□ 1.51
CCDC57-213ENST00000581625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.5■■□□□ 1.51
CCDC57-213ENST00000581625 ATP7AQ04656 1500 aa24.49■■□□□ 1.51
CCDC57-213ENST00000581625 CROCC2H7BZ55 1655 aa24.48■■□□□ 1.51
CCDC57-213ENST00000581625 SPAG9O60271 1321 aaKnown RBP24.48■■□□□ 1.51
CCDC57-213ENST00000581625 SHANK2Q9UPX8 1470 aa24.48■■□□□ 1.51
CCDC57-213ENST00000581625 MAST1Q9Y2H9 1570 aa24.47■■□□□ 1.51
CCDC57-213ENST00000581625 RTEL1-TNFRSF6BF6WH68 1400 aa24.47■■□□□ 1.51
CCDC57-213ENST00000581625 KIDINS220Q9ULH0 1771 aa24.46■■□□□ 1.51
CCDC57-213ENST00000581625 DAPK1P53355 1430 aa24.45■■□□□ 1.51
CCDC57-213ENST00000581625 YEATS2Q9ULM3 1422 aa24.45■■□□□ 1.51
CCDC57-213ENST00000581625 FAM50AQ14320 339 aaKnown RBP24.45■■□□□ 1.5
CCDC57-213ENST00000581625 DIP2CQ9Y2E4 1556 aa24.44■■□□□ 1.5
CCDC57-213ENST00000581625 ABCA6Q8N139 1617 aa24.43■■□□□ 1.5
CCDC57-213ENST00000581625 ABCC5O15440 1437 aa24.43■■□□□ 1.5
CCDC57-213ENST00000581625 TSPY4P0CV99 314 aa24.42■■□□□ 1.5
CCDC57-213ENST00000581625 TSPY10P0CW01 314 aa24.42■■□□□ 1.5
CCDC57-213ENST00000581625 C9orf84Q5VXU9 1444 aa24.42■■□□□ 1.5
CCDC57-213ENST00000581625 MYT1LQ9UL68 1186 aa24.41■■□□□ 1.5
CCDC57-213ENST00000581625 REREQ9P2R6 1566 aa24.41■■□□□ 1.5
CCDC57-213ENST00000581625 ATP10AO60312 1499 aa24.39■■□□□ 1.5
CCDC57-213ENST00000581625 PLXNC1O60486 1568 aa24.39■■□□□ 1.5
CCDC57-213ENST00000581625 ADGBQ8N7X0 1667 aa24.37■■□□□ 1.49
CCDC57-213ENST00000581625 ADGRL2O95490 1459 aa24.33■■□□□ 1.49
CCDC57-213ENST00000581625 A2MP01023 1474 aa24.32■■□□□ 1.48
CCDC57-213ENST00000581625 AGLP35573 1532 aa24.3■■□□□ 1.48
CCDC57-213ENST00000581625 ANKRD30AQ9BXX3 1397 aa24.29■■□□□ 1.48
CCDC57-213ENST00000581625 ROCK1Q13464 1354 aa24.27■■□□□ 1.48
CCDC57-213ENST00000581625 PTPRKQ15262 1439 aa24.27■■□□□ 1.48
CCDC57-213ENST00000581625 DUOX2Q9NRD8 1548 aa24.26■■□□□ 1.47
CCDC57-213ENST00000581625 SIGLEC1Q9BZZ2 1709 aa24.26■■□□□ 1.47
CCDC57-213ENST00000581625 KIF15Q9NS87 1388 aa24.26■■□□□ 1.47
CCDC57-213ENST00000581625 NCOA1Q15788 1441 aa24.26■■□□□ 1.47
CCDC57-213ENST00000581625 DHX29Q7Z478 1369 aaKnown RBP24.25■■□□□ 1.47
CCDC57-213ENST00000581625 EIF2AK4Q9P2K8 1649 aaKnown RBP24.23■■□□□ 1.47
CCDC57-213ENST00000581625 ERBINQ96RT1 1412 aa24.22■■□□□ 1.47
CCDC57-213ENST00000581625 ARID4BQ4LE39 1312 aaPredicted RBP24.22■■□□□ 1.47
CCDC57-213ENST00000581625 CHIC2Q9UKJ5 165 aa24.22■■□□□ 1.47
CCDC57-213ENST00000581625 BCORL1Q5H9F3 1711 aa24.21■■□□□ 1.47
CCDC57-213ENST00000581625 ITGAEP38570 1179 aa24.21■■□□□ 1.47
CCDC57-213ENST00000581625 RRP7BPQ9NSQ0 103 aa24.17■■□□□ 1.46
CCDC57-213ENST00000581625 RNF17Q9BXT8 1623 aaKnown RBP24.13■■□□□ 1.45
CCDC57-213ENST00000581625 ADAMTSL3P82987 1691 aa24.13■■□□□ 1.45
CCDC57-213ENST00000581625 GCC2Q8IWJ2 1684 aa24.12■■□□□ 1.45
CCDC57-213ENST00000581625 ANKRD50Q9ULJ7 1429 aa24.12■■□□□ 1.45
CCDC57-213ENST00000581625 FAM135AQ9P2D6 1515 aa24.12■■□□□ 1.45
CCDC57-213ENST00000581625 HFM1A2PYH4 1435 aa24.11■■□□□ 1.45
CCDC57-213ENST00000581625 KIF3BO15066 747 aa24.09■■□□□ 1.45
CCDC57-213ENST00000581625 DEPDC5O75140 1603 aa24.08■■□□□ 1.45
CCDC57-213ENST00000581625 MADDQ8WXG6 1647 aa24.08■■□□□ 1.45
CCDC57-213ENST00000581625 FER1L4A9Z1Z3 1794 aa24.07■■□□□ 1.44
CCDC57-213ENST00000581625 PRDM15P57071 1507 aaPredicted RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms