RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 BCORL1Q5H9F3 1711 aa34.04■■■■□ 3.04
CCDC42-203ENST00000581598 EFCAB2Q5VUJ9 269 aa34.03■■■■□ 3.04
CCDC42-203ENST00000581598 SCAPERQ9BY12 1400 aa34.03■■■■□ 3.04
CCDC42-203ENST00000581598 FYCO1Q9BQS8 1478 aa34.02■■■■□ 3.04
CCDC42-203ENST00000581598 POGZQ7Z3K3 1410 aa34.02■■■■□ 3.04
CCDC42-203ENST00000581598 ZFYVE16Q7Z3T8 1539 aa33.99■■■■□ 3.03
CCDC42-203ENST00000581598 PTPRMP28827 1452 aa33.95■■■■□ 3.02
CCDC42-203ENST00000581598 ARID4BQ4LE39 1312 aaPredicted RBP33.94■■■■□ 3.02
CCDC42-203ENST00000581598 ARHGAP5Q13017 1502 aa33.94■■■■□ 3.02
CCDC42-203ENST00000581598 YEATS2Q9ULM3 1422 aa33.93■■■■□ 3.02
CCDC42-203ENST00000581598 CDC42BPBQ9Y5S2 1711 aa33.91■■■■□ 3.02
CCDC42-203ENST00000581598 MADDQ8WXG6 1647 aa33.9■■■■□ 3.02
CCDC42-203ENST00000581598 PREX2Q70Z35 1606 aa33.89■■■■□ 3.02
CCDC42-203ENST00000581598 ZNF518AQ6AHZ1 1483 aa33.87■■■■□ 3.01
CCDC42-203ENST00000581598 SIGLEC1Q9BZZ2 1709 aa33.86■■■■□ 3.01
CCDC42-203ENST00000581598 KDM5CP41229 1560 aa33.85■■■■□ 3.01
CCDC42-203ENST00000581598 ATP10AO60312 1499 aa33.81■■■■□ 3
CCDC42-203ENST00000581598 CDC42BPAQ5VT25 1732 aa33.8■■■■□ 3
CCDC42-203ENST00000581598 RIMS1Q86UR5 1692 aaKnown RBP33.78■■■■□ 3
CCDC42-203ENST00000581598 C9orf84Q5VXU9 1444 aa33.78■■■■□ 3
CCDC42-203ENST00000581598 ABCC1P33527 1531 aa33.77■■■■□ 3
CCDC42-203ENST00000581598 AFAP1Q8N556 730 aa33.74■■■□□ 2.99
CCDC42-203ENST00000581598 ITSN2Q9NZM3 1697 aa33.73■■■□□ 2.99
CCDC42-203ENST00000581598 MLH3Q9UHC1 1453 aa33.71■■■□□ 2.99
CCDC42-203ENST00000581598 CEP162Q5TB80 1403 aa33.7■■■□□ 2.99
CCDC42-203ENST00000581598 ARHGEF12Q9NZN5 1544 aa33.7■■■□□ 2.99
CCDC42-203ENST00000581598 REREQ9P2R6 1566 aa33.68■■■□□ 2.98
CCDC42-203ENST00000581598 FER1L4A9Z1Z3 1794 aa33.67■■■□□ 2.98
CCDC42-203ENST00000581598 GPATCH8Q9UKJ3 1502 aaKnown RBP33.67■■■□□ 2.98
CCDC42-203ENST00000581598 DIP2CQ9Y2E4 1556 aa33.67■■■□□ 2.98
CCDC42-203ENST00000581598 TRAPPC8Q9Y2L5 1435 aa33.66■■■□□ 2.98
CCDC42-203ENST00000581598 ABCA6Q8N139 1617 aa33.62■■■□□ 2.97
CCDC42-203ENST00000581598 SAMD9LQ8IVG5 1584 aa33.62■■■□□ 2.97
CCDC42-203ENST00000581598 MTUS2Q5JR59 1369 aa33.61■■■□□ 2.97
CCDC42-203ENST00000581598 MLECQ14165 292 aa33.6■■■□□ 2.97
CCDC42-203ENST00000581598 LMTK3Q96Q04 1460 aa33.59■■■□□ 2.97
CCDC42-203ENST00000581598 KIDINS220Q9ULH0 1771 aa33.57■■■□□ 2.97
CCDC42-203ENST00000581598 MYT1LQ9UL68 1186 aa33.57■■■□□ 2.96
CCDC42-203ENST00000581598 EHBP1L1Q8N3D4 1523 aa33.57■■■□□ 2.96
CCDC42-203ENST00000581598 AGLP35573 1532 aa33.55■■■□□ 2.96
CCDC42-203ENST00000581598 CCNB3Q8WWL7 1395 aa33.55■■■□□ 2.96
CCDC42-203ENST00000581598 KIAA1107Q9UPP5 1409 aa33.54■■■□□ 2.96
CCDC42-203ENST00000581598 PLEKHH2Q8IVE3 1493 aa33.54■■■□□ 2.96
CCDC42-203ENST00000581598 SYCP2Q9BX26 1530 aa33.53■■■□□ 2.96
CCDC42-203ENST00000581598 CFDP1Q9UEE9 299 aaPredicted RBP33.51■■■□□ 2.95
CCDC42-203ENST00000581598 ZNF777Q9ULD5 760 aaPredicted RBP33.51■■■□□ 2.95
CCDC42-203ENST00000581598 TIAM1Q13009 1591 aa33.48■■■□□ 2.95
CCDC42-203ENST00000581598 HNRNPMP52272 730 aaKnown RBP eCLIP33.43■■■□□ 2.94
CCDC42-203ENST00000581598 SPAG9O60271 1321 aaKnown RBP33.42■■■□□ 2.94
CCDC42-203ENST00000581598 PLPPR3Q6T4P5 718 aa33.41■■■□□ 2.94
CCDC42-203ENST00000581598 INO80Q9ULG1 1556 aaPredicted RBP33.4■■■□□ 2.94
CCDC42-203ENST00000581598 ATP7AQ04656 1500 aa33.39■■■□□ 2.94
CCDC42-203ENST00000581598 LOC105371045A0A1W2PR82 267 aa33.39■■■□□ 2.94
CCDC42-203ENST00000581598 FBXO41Q8TF61 875 aa33.38■■■□□ 2.93
CCDC42-203ENST00000581598 PREX1Q8TCU6 1659 aa33.38■■■□□ 2.93
CCDC42-203ENST00000581598 VPS8Q8N3P4 1428 aa33.37■■■□□ 2.93
CCDC42-203ENST00000581598 SUPT6HQ7KZ85 1726 aaKnown RBP33.37■■■□□ 2.93
CCDC42-203ENST00000581598 SETD1BQ9UPS6 1966 aaKnown RBP33.36■■■□□ 2.93
CCDC42-203ENST00000581598 MBD5Q9P267 1494 aa33.33■■■□□ 2.93
CCDC42-203ENST00000581598 NCOA2Q15596 1464 aa33.32■■■□□ 2.92
CCDC42-203ENST00000581598 CEBPAP49715 358 aaPredicted RBP33.32■■■□□ 2.92
CCDC42-203ENST00000581598 PLXNC1O60486 1568 aa33.31■■■□□ 2.92
CCDC42-203ENST00000581598 CNTLNQ9NXG0 1405 aa33.31■■■□□ 2.92
CCDC42-203ENST00000581598 C3P01024 1663 aa33.31■■■□□ 2.92
CCDC42-203ENST00000581598 HSPA2P54652 639 aa33.3■■■□□ 2.92
CCDC42-203ENST00000581598 ZNF644Q9H582 1327 aaPredicted RBP33.28■■■□□ 2.92
CCDC42-203ENST00000581598 A2MP01023 1474 aa33.27■■■□□ 2.92
CCDC42-203ENST00000581598 ESF1Q9H501 851 aaKnown RBP33.27■■■□□ 2.92
CCDC42-203ENST00000581598 ADGBQ8N7X0 1667 aa33.26■■■□□ 2.92
CCDC42-203ENST00000581598 MAP3K1Q13233 1512 aa33.25■■■□□ 2.91
CCDC42-203ENST00000581598 RTEL1-TNFRSF6BF6WH68 1400 aa33.25■■■□□ 2.91
CCDC42-203ENST00000581598 MROH2AA6NES4 1674 aa33.24■■■□□ 2.91
CCDC42-203ENST00000581598 LRRC9Q6ZRR7 1453 aa33.24■■■□□ 2.91
CCDC42-203ENST00000581598 UHRF1BP1Q6BDS2 1440 aa33.22■■■□□ 2.91
CCDC42-203ENST00000581598 CAMSAP2Q08AD1 1489 aa33.19■■■□□ 2.9
CCDC42-203ENST00000581598 RSPH4AQ5TD94 716 aa33.18■■■□□ 2.9
CCDC42-203ENST00000581598 CCDC141Q6ZP82 1450 aa33.18■■■□□ 2.9
CCDC42-203ENST00000581598 ARHGEF5Q12774 1597 aa33.13■■■□□ 2.89
CCDC42-203ENST00000581598 NPATQ14207 1427 aa33.12■■■□□ 2.89
CCDC42-203ENST00000581598 PPP6R1Q9UPN7 881 aa33.11■■■□□ 2.89
CCDC42-203ENST00000581598 ZMYM3Q14202 1370 aa33.1■■■□□ 2.89
CCDC42-203ENST00000581598 CLTCQ00610 1675 aaKnown RBP33.1■■■□□ 2.89
CCDC42-203ENST00000581598 DHX29Q7Z478 1369 aaKnown RBP33.09■■■□□ 2.89
CCDC42-203ENST00000581598 STRCQ7RTU9 1775 aa33.08■■■□□ 2.89
CCDC42-203ENST00000581598 KANK4Q5T7N3 995 aaPredicted RBP33.05■■■□□ 2.88
CCDC42-203ENST00000581598 GGT6Q6P531 493 aa33.04■■■□□ 2.88
CCDC42-203ENST00000581598 MIA2Q96PC5 1412 aa33.02■■■□□ 2.88
CCDC42-203ENST00000581598 DMRT2Q9Y5R5 561 aa33.01■■■□□ 2.87
CCDC42-203ENST00000581598 MYOM3Q5VTT5 1437 aa33■■■□□ 2.87
CCDC42-203ENST00000581598 FAM135AQ9P2D6 1515 aa32.98■■■□□ 2.87
CCDC42-203ENST00000581598 TSPY4P0CV99 314 aa32.98■■■□□ 2.87
CCDC42-203ENST00000581598 TSPY10P0CW01 314 aa32.98■■■□□ 2.87
CCDC42-203ENST00000581598 MAST1Q9Y2H9 1570 aa32.97■■■□□ 2.87
CCDC42-203ENST00000581598 PTPRKQ15262 1439 aa32.96■■■□□ 2.87
CCDC42-203ENST00000581598 CERKQ8TCT0 537 aa32.94■■■□□ 2.86
CCDC42-203ENST00000581598 PTPRTO14522 1441 aa32.94■■■□□ 2.86
CCDC42-203ENST00000581598 ZNF142P52746 1687 aaPredicted RBP32.93■■■□□ 2.86
CCDC42-203ENST00000581598 NCOA1Q15788 1441 aa32.92■■■□□ 2.86
CCDC42-203ENST00000581598 MYO3AQ8NEV4 1616 aa32.91■■■□□ 2.86
CCDC42-203ENST00000581598 KIF3BO15066 747 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms