RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 POTEB2H3BUK9 544 aa10.89□□□□□ -0.67
NF1-220ENST00000581113 LARP6Q9BRS8 491 aaKnown RBP10.89□□□□□ -0.67
NF1-220ENST00000581113 TMC2Q8TDI7 906 aa10.88□□□□□ -0.67
NF1-220ENST00000581113 CRISPLD2Q9H0B8 497 aa10.88□□□□□ -0.67
NF1-220ENST00000581113 GPHNQ9NQX3 736 aaPredicted RBP10.86□□□□□ -0.67
NF1-220ENST00000581113 POTEJP0CG39 1038 aa10.85□□□□□ -0.67
NF1-220ENST00000581113 DDX27Q96GQ7 796 aaKnown RBP10.85□□□□□ -0.67
NF1-220ENST00000581113 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.85□□□□□ -0.67
NF1-220ENST00000581113 C2orf72A6NCS6 295 aa10.83□□□□□ -0.68
NF1-220ENST00000581113 TMEM92Q6UXU6 159 aa10.83□□□□□ -0.68
NF1-220ENST00000581113 MFSD10Q14728 455 aa10.81□□□□□ -0.68
NF1-220ENST00000581113 PPP1R15BQ5SWA1 713 aa10.81□□□□□ -0.68
NF1-220ENST00000581113 SCUBE2Q9NQ36 999 aa10.81□□□□□ -0.68
NF1-220ENST00000581113 KIF3CO14782 793 aa10.8□□□□□ -0.68
NF1-220ENST00000581113 DSG2Q14126 1118 aa10.8□□□□□ -0.68
NF1-220ENST00000581113 MAMSTRQ6ZN01 415 aa10.79□□□□□ -0.68
NF1-220ENST00000581113 FOXK1P85037 733 aa10.78□□□□□ -0.68
NF1-220ENST00000581113 E2F4Q16254 413 aa10.77□□□□□ -0.69
NF1-220ENST00000581113 PLPP6Q8IY26 295 aa10.76□□□□□ -0.69
NF1-220ENST00000581113 P3H3Q8IVL6 736 aa10.75□□□□□ -0.69
NF1-220ENST00000581113 LHX8Q68G74 356 aa10.74□□□□□ -0.69
NF1-220ENST00000581113 SLAIN1Q8ND83 568 aa10.74□□□□□ -0.69
NF1-220ENST00000581113 KCNV2Q8TDN2 545 aa10.74□□□□□ -0.69
NF1-220ENST00000581113 CAMK2BQ13554 666 aa10.69□□□□□ -0.7
NF1-220ENST00000581113 OTUD5Q96G74 571 aa10.68□□□□□ -0.7
NF1-220ENST00000581113 EMILIN3Q9NT22 766 aa10.67□□□□□ -0.7
NF1-220ENST00000581113 ARHGEF1Q92888 912 aaKnown RBP10.66□□□□□ -0.7
NF1-220ENST00000581113 NBR1Q14596 966 aa10.65□□□□□ -0.7
NF1-220ENST00000581113 UPF1Q92900 1129 aaKnown RBP eCLIP10.65□□□□□ -0.7
NF1-220ENST00000581113 BCANQ96GW7 911 aa10.65□□□□□ -0.7
NF1-220ENST00000581113 DPYSL4O14531 572 aa10.62□□□□□ -0.71
NF1-220ENST00000581113 MAP3K9P80192 1104 aa10.6□□□□□ -0.71
NF1-220ENST00000581113 OXER1Q8TDS5 423 aa10.6□□□□□ -0.71
NF1-220ENST00000581113 ARIH1Q9Y4X5 557 aaPredicted RBP10.6□□□□□ -0.71
NF1-220ENST00000581113 SLC34A2O95436 690 aa10.58□□□□□ -0.72
NF1-220ENST00000581113 DOK7Q18PE1 504 aa10.58□□□□□ -0.72
NF1-220ENST00000581113 HOXB3P14651 431 aaPredicted RBP10.57□□□□□ -0.72
NF1-220ENST00000581113 PTCD2Q8WV60 388 aaKnown RBP10.57□□□□□ -0.72
NF1-220ENST00000581113 TBC1D12O60347 775 aa10.56□□□□□ -0.72
NF1-220ENST00000581113 RIMBP2O15034 1052 aa10.55□□□□□ -0.72
NF1-220ENST00000581113 ZNF710Q8N1W2 664 aa10.55□□□□□ -0.72
NF1-220ENST00000581113 SNPHO15079 494 aa10.55□□□□□ -0.72
NF1-220ENST00000581113 SEMA3EO15041 775 aa10.54□□□□□ -0.72
NF1-220ENST00000581113 PCDHGA4Q9Y5G9 962 aa10.54□□□□□ -0.72
NF1-220ENST00000581113 PDIA6Q15084 440 aa10.53□□□□□ -0.72
NF1-220ENST00000581113 SPDYE16A6NNV3 312 aaPredicted RBP10.52□□□□□ -0.73
NF1-220ENST00000581113 EVI5O60447 810 aa10.51□□□□□ -0.73
NF1-220ENST00000581113 ZNF316A6NFI3 1004 aaPredicted RBP10.5□□□□□ -0.73
NF1-220ENST00000581113 ARSIQ5FYB1 569 aa10.5□□□□□ -0.73
NF1-220ENST00000581113 ZSWIM6Q9HCJ5 1215 aa10.49□□□□□ -0.73
NF1-220ENST00000581113 KHSRPQ92945 711 aaKnown RBP eCLIP10.49□□□□□ -0.73
NF1-220ENST00000581113 NUDT7P0C024 238 aa10.47□□□□□ -0.73
NF1-220ENST00000581113 GPR153Q6NV75 609 aa10.47□□□□□ -0.73
NF1-220ENST00000581113 TESPA1A2RU30 521 aaPredicted RBP10.46□□□□□ -0.74
NF1-220ENST00000581113 MLLT3P42568 568 aaPredicted RBP10.46□□□□□ -0.74
NF1-220ENST00000581113 TULP1O00294 542 aaPredicted RBP10.44□□□□□ -0.74
NF1-220ENST00000581113 GRXCR2A6NFK2 248 aa10.43□□□□□ -0.74
NF1-220ENST00000581113 DDX12PQ92771 950 aa10.43□□□□□ -0.74
NF1-220ENST00000581113 SMYD5Q6GMV2 418 aa10.42□□□□□ -0.74
NF1-220ENST00000581113 HOXB1P14653 301 aaPredicted RBP10.42□□□□□ -0.74
NF1-220ENST00000581113 ANO8Q9HCE9 1232 aaPredicted RBP10.42□□□□□ -0.74
NF1-220ENST00000581113 KDM4FA0A1W2PPD8 638 aa10.41□□□□□ -0.74
NF1-220ENST00000581113 ST18O60284 1047 aa10.4□□□□□ -0.74
NF1-220ENST00000581113 PTGER2P43116 358 aa10.4□□□□□ -0.74
NF1-220ENST00000581113 FAM163AQ96GL9 167 aaPredicted RBP10.4□□□□□ -0.74
NF1-220ENST00000581113 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.37□□□□□ -0.75
NF1-220ENST00000581113 LMOD2Q6P5Q4 547 aa10.36□□□□□ -0.75
NF1-220ENST00000581113 LHX6Q9UPM6 363 aa10.36□□□□□ -0.75
NF1-220ENST00000581113 PHF14O94880 888 aa10.35□□□□□ -0.75
NF1-220ENST00000581113 ZNF454Q8N9F8 522 aa10.35□□□□□ -0.75
NF1-220ENST00000581113 JPH4Q96JJ6 628 aa10.35□□□□□ -0.75
NF1-220ENST00000581113 OSBPP22059 807 aa10.34□□□□□ -0.75
NF1-220ENST00000581113 RBM26Q5T8P6 1007 aaKnown RBP10.34□□□□□ -0.75
NF1-220ENST00000581113 MARVELD3Q96A59 401 aa10.34□□□□□ -0.75
NF1-220ENST00000581113 PCDHGA10Q9Y5H3 936 aa10.34□□□□□ -0.75
NF1-220ENST00000581113 FOSBP53539 338 aa10.33□□□□□ -0.76
NF1-220ENST00000581113 EMP3P54852 163 aa10.32□□□□□ -0.76
NF1-220ENST00000581113 EPAS1Q99814 870 aa10.32□□□□□ -0.76
NF1-220ENST00000581113 RBM33Q96EV2 1170 aaKnown RBP10.31□□□□□ -0.76
NF1-220ENST00000581113 ERBB3P21860 1342 aa10.31□□□□□ -0.76
NF1-220ENST00000581113 TYW1BQ6NUM6 668 aa10.3□□□□□ -0.76
NF1-220ENST00000581113 PSDA5PKW4 1024 aaPredicted RBP10.3□□□□□ -0.76
NF1-220ENST00000581113 PRIM1P49642 420 aaKnown RBP10.3□□□□□ -0.76
NF1-220ENST00000581113 MAP3K7O43318 606 aa10.29□□□□□ -0.76
NF1-220ENST00000581113 PPP4R3BQ5MIZ7 849 aa10.29□□□□□ -0.76
NF1-220ENST00000581113 FBXW7Q969H0 707 aa10.29□□□□□ -0.76
NF1-220ENST00000581113 ZDHHC16Q969W1 377 aa10.29□□□□□ -0.76
NF1-220ENST00000581113 NUTM2FA1L443 756 aa10.28□□□□□ -0.76
NF1-220ENST00000581113 EN1Q05925 392 aaPredicted RBP10.28□□□□□ -0.76
NF1-220ENST00000581113 VARS2Q5ST30 1063 aaKnown RBP10.28□□□□□ -0.76
NF1-220ENST00000581113 LCE2DQ5TA82 110 aaPredicted RBP10.28□□□□□ -0.76
NF1-220ENST00000581113 FAM205CA6NFA0 338 aa10.27□□□□□ -0.77
NF1-220ENST00000581113 TPRNQ4KMQ1 711 aa10.27□□□□□ -0.77
NF1-220ENST00000581113 GPIHBP1Q8IV16 184 aa10.27□□□□□ -0.77
NF1-220ENST00000581113 ADAM33Q9BZ11 813 aa10.25□□□□□ -0.77
NF1-220ENST00000581113 TSR1Q2NL82 804 aaKnown RBP10.24□□□□□ -0.77
NF1-220ENST00000581113 CDHR5Q9HBB8 845 aa10.23□□□□□ -0.77
NF1-220ENST00000581113 PRKCSHP14314 528 aaPredicted RBP10.22□□□□□ -0.77
NF1-220ENST00000581113 ZC3H15Q8WU90 426 aaKnown RBP10.22□□□□□ -0.77
NF1-220ENST00000581113 C6orf132Q5T0Z8 1188 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms