RNA–Protein interactions for RNA: ENST00000581080.1

RARA-AS1-201, RARA antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene RARA-AS1, Length 1,790 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-AS1-201ENST00000581080 ABCA9Q8IUA7 1624 aa35.28■■■■□ 3.24
RARA-AS1-201ENST00000581080 PLCH2O75038 1416 aa35.27■■■■□ 3.24
RARA-AS1-201ENST00000581080 ZNF777Q9ULD5 760 aaPredicted RBP35.27■■■■□ 3.24
RARA-AS1-201ENST00000581080 CAMSAP2Q08AD1 1489 aa35.26■■■■□ 3.23
RARA-AS1-201ENST00000581080 DNAJC5Q9H3Z4 198 aa35.25■■■■□ 3.23
RARA-AS1-201ENST00000581080 ARHGAP5Q13017 1502 aa35.22■■■■□ 3.23
RARA-AS1-201ENST00000581080 ARAP3Q8WWN8 1544 aa35.18■■■■□ 3.22
RARA-AS1-201ENST00000581080 PTPRKQ15262 1439 aa35.17■■■■□ 3.22
RARA-AS1-201ENST00000581080 EFCAB2Q5VUJ9 269 aa35.15■■■■□ 3.22
RARA-AS1-201ENST00000581080 SAMD9LQ8IVG5 1584 aa35.14■■■■□ 3.22
RARA-AS1-201ENST00000581080 DNMT1P26358 1616 aaKnown RBP35.13■■■■□ 3.21
RARA-AS1-201ENST00000581080 DAPK1P53355 1430 aa35.12■■■■□ 3.21
RARA-AS1-201ENST00000581080 ABCC5O15440 1437 aa35.11■■■■□ 3.21
RARA-AS1-201ENST00000581080 CD109Q6YHK3 1445 aa35.08■■■■□ 3.21
RARA-AS1-201ENST00000581080 GLI2P10070 1586 aa35.06■■■■□ 3.2
RARA-AS1-201ENST00000581080 PLEKHH2Q8IVE3 1493 aa35.06■■■■□ 3.2
RARA-AS1-201ENST00000581080 MBD5Q9P267 1494 aa35.06■■■■□ 3.2
RARA-AS1-201ENST00000581080 KIAA1107Q9UPP5 1409 aa35.05■■■■□ 3.2
RARA-AS1-201ENST00000581080 HNRNPMP52272 730 aaKnown RBP eCLIP35.05■■■■□ 3.2
RARA-AS1-201ENST00000581080 FANCAO15360 1455 aa35.04■■■■□ 3.2
RARA-AS1-201ENST00000581080 RSPH4AQ5TD94 716 aa35.02■■■■□ 3.2
RARA-AS1-201ENST00000581080 ARHGEF5Q12774 1597 aa35.02■■■■□ 3.2
RARA-AS1-201ENST00000581080 DIP2BQ9P265 1576 aa35.02■■■■□ 3.2
RARA-AS1-201ENST00000581080 CHIC2Q9UKJ5 165 aa35.01■■■■□ 3.2
RARA-AS1-201ENST00000581080 FAM69CQ0P6D2 419 aa35■■■■□ 3.19
RARA-AS1-201ENST00000581080 SYCP2Q9BX26 1530 aa34.99■■■■□ 3.19
RARA-AS1-201ENST00000581080 MAP3K4Q9Y6R4 1608 aa34.98■■■■□ 3.19
RARA-AS1-201ENST00000581080 SETD5Q9C0A6 1442 aa34.98■■■■□ 3.19
RARA-AS1-201ENST00000581080 AKNAQ7Z591 1439 aa34.97■■■■□ 3.19
RARA-AS1-201ENST00000581080 ABCC1P33527 1531 aa34.96■■■■□ 3.19
RARA-AS1-201ENST00000581080 HFM1A2PYH4 1435 aa34.96■■■■□ 3.19
RARA-AS1-201ENST00000581080 CROCC2H7BZ55 1655 aa34.96■■■■□ 3.19
RARA-AS1-201ENST00000581080 ARHGEF12Q9NZN5 1544 aa34.95■■■■□ 3.19
RARA-AS1-201ENST00000581080 CCDC141Q6ZP82 1450 aa34.95■■■■□ 3.19
RARA-AS1-201ENST00000581080 ROCK1Q13464 1354 aa34.95■■■■□ 3.19
RARA-AS1-201ENST00000581080 TSPY4P0CV99 314 aa34.93■■■■□ 3.18
RARA-AS1-201ENST00000581080 TSPY10P0CW01 314 aa34.93■■■■□ 3.18
RARA-AS1-201ENST00000581080 SHANK2Q9UPX8 1470 aa34.93■■■■□ 3.18
RARA-AS1-201ENST00000581080 RAB3GAP2Q9H2M9 1393 aa34.91■■■■□ 3.18
RARA-AS1-201ENST00000581080 NAIPQ13075 1403 aa34.9■■■■□ 3.18
RARA-AS1-201ENST00000581080 RRP7BPQ9NSQ0 103 aa34.9■■■■□ 3.18
RARA-AS1-201ENST00000581080 CFAP74Q9C0B2 1584 aa34.88■■■■□ 3.17
RARA-AS1-201ENST00000581080 C9orf84Q5VXU9 1444 aa34.88■■■■□ 3.17
RARA-AS1-201ENST00000581080 ADGRL1O94910 1474 aa34.87■■■■□ 3.17
RARA-AS1-201ENST00000581080 ADGRL2O95490 1459 aa34.87■■■■□ 3.17
RARA-AS1-201ENST00000581080 NCOA1Q15788 1441 aa34.85■■■■□ 3.17
RARA-AS1-201ENST00000581080 HRCP23327 699 aa34.85■■■■□ 3.17
RARA-AS1-201ENST00000581080 TRAPPC8Q9Y2L5 1435 aa34.84■■■■□ 3.17
RARA-AS1-201ENST00000581080 NEO1Q92859 1461 aa34.84■■■■□ 3.17
RARA-AS1-201ENST00000581080 ADGBQ8N7X0 1667 aa34.83■■■■□ 3.17
RARA-AS1-201ENST00000581080 SCAPERQ9BY12 1400 aa34.83■■■■□ 3.17
RARA-AS1-201ENST00000581080 ANKRD30AQ9BXX3 1397 aa34.83■■■■□ 3.17
RARA-AS1-201ENST00000581080 KIF13AQ9H1H9 1805 aa34.82■■■■□ 3.16
RARA-AS1-201ENST00000581080 GCC2Q8IWJ2 1684 aa34.81■■■■□ 3.16
RARA-AS1-201ENST00000581080 MAST1Q9Y2H9 1570 aa34.79■■■■□ 3.16
RARA-AS1-201ENST00000581080 AFAP1Q8N556 730 aa34.77■■■■□ 3.16
RARA-AS1-201ENST00000581080 CCER1Q8TC90 406 aaPredicted RBP34.74■■■■□ 3.15
RARA-AS1-201ENST00000581080 PPRC1Q5VV67 1664 aaKnown RBP34.71■■■■□ 3.15
RARA-AS1-201ENST00000581080 TSPOAP1O95153 1857 aa34.71■■■■□ 3.15
RARA-AS1-201ENST00000581080 TEX14Q8IWB6 1497 aa34.71■■■■□ 3.15
RARA-AS1-201ENST00000581080 SPAG9O60271 1321 aaKnown RBP34.69■■■■□ 3.14
RARA-AS1-201ENST00000581080 ZNF518AQ6AHZ1 1483 aa34.68■■■■□ 3.14
RARA-AS1-201ENST00000581080 RTEL1-TNFRSF6BF6WH68 1400 aa34.68■■■■□ 3.14
RARA-AS1-201ENST00000581080 KIF15Q9NS87 1388 aa34.67■■■■□ 3.14
RARA-AS1-201ENST00000581080 POGZQ7Z3K3 1410 aa34.66■■■■□ 3.14
RARA-AS1-201ENST00000581080 KDM6BO15054 1643 aa34.66■■■■□ 3.14
RARA-AS1-201ENST00000581080 PLXNC1O60486 1568 aa34.65■■■■□ 3.14
RARA-AS1-201ENST00000581080 DHX57Q6P158 1386 aaKnown RBP34.64■■■■□ 3.14
RARA-AS1-201ENST00000581080 ANKRD50Q9ULJ7 1429 aa34.63■■■■□ 3.13
RARA-AS1-201ENST00000581080 DENND4BO75064 1496 aaPredicted RBP34.63■■■■□ 3.13
RARA-AS1-201ENST00000581080 ZFYVE16Q7Z3T8 1539 aa34.62■■■■□ 3.13
RARA-AS1-201ENST00000581080 ACIN1Q9UKV3 1341 aaKnown RBP34.6■■■■□ 3.13
RARA-AS1-201ENST00000581080 KDM5CP41229 1560 aa34.59■■■■□ 3.13
RARA-AS1-201ENST00000581080 INO80Q9ULG1 1556 aaPredicted RBP34.59■■■■□ 3.13
RARA-AS1-201ENST00000581080 ATP7AQ04656 1500 aa34.57■■■■□ 3.13
RARA-AS1-201ENST00000581080 RAPGEF3O95398 923 aa34.57■■■■□ 3.12
RARA-AS1-201ENST00000581080 MLH3Q9UHC1 1453 aa34.53■■■■□ 3.12
RARA-AS1-201ENST00000581080 DUOX2Q9NRD8 1548 aa34.53■■■■□ 3.12
RARA-AS1-201ENST00000581080 TRHP20396 242 aaPredicted RBP34.52■■■■□ 3.12
RARA-AS1-201ENST00000581080 MYT1LQ9UL68 1186 aa34.52■■■■□ 3.12
RARA-AS1-201ENST00000581080 RICTORQ6R327 1708 aa34.52■■■■□ 3.12
RARA-AS1-201ENST00000581080 KIDINS220Q9ULH0 1771 aa34.5■■■■□ 3.11
RARA-AS1-201ENST00000581080 TRIM52Q96A61 297 aa34.5■■■■□ 3.11
RARA-AS1-201ENST00000581080 HECW2Q9P2P5 1572 aa34.47■■■■□ 3.11
RARA-AS1-201ENST00000581080 CLSPNQ9HAW4 1339 aa34.46■■■■□ 3.11
RARA-AS1-201ENST00000581080 ERBINQ96RT1 1412 aa34.46■■■■□ 3.11
RARA-AS1-201ENST00000581080 FRMPD1Q5SYB0 1578 aa34.44■■■■□ 3.1
RARA-AS1-201ENST00000581080 ZEB1P37275 1124 aaPredicted RBP34.41■■■■□ 3.1
RARA-AS1-201ENST00000581080 DHX29Q7Z478 1369 aaKnown RBP34.38■■■■□ 3.09
RARA-AS1-201ENST00000581080 COL17A1Q9UMD9 1497 aaPredicted RBP34.38■■■■□ 3.09
RARA-AS1-201ENST00000581080 ZMYM4Q5VZL5 1548 aa34.38■■■■□ 3.09
RARA-AS1-201ENST00000581080 MPHOSPH9Q99550 1183 aa34.36■■■■□ 3.09
RARA-AS1-201ENST00000581080 NUP155O75694 1391 aa34.33■■■■□ 3.09
RARA-AS1-201ENST00000581080 MAGI2Q86UL8 1455 aa34.32■■■■□ 3.09
RARA-AS1-201ENST00000581080 ABCA6Q8N139 1617 aa34.32■■■■□ 3.09
RARA-AS1-201ENST00000581080 A2MP01023 1474 aa34.32■■■■□ 3.08
RARA-AS1-201ENST00000581080 PZPP20742 1482 aa34.31■■■■□ 3.08
RARA-AS1-201ENST00000581080 SLC4A1APQ9BWU0 796 aaKnown RBP34.3■■■■□ 3.08
RARA-AS1-201ENST00000581080 KDM5DQ9BY66 1539 aa34.3■■■■□ 3.08
RARA-AS1-201ENST00000581080 UNC13BO14795 1591 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms