RNA–Protein interactions for RNA: ENST00000580838.1

PTPRM-212, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-212ENST00000580838 FBXO22Q8NEZ5 403 aa11.54□□□□□ -0.56
PTPRM-212ENST00000580838 ERBB3P21860 1342 aa11.54□□□□□ -0.56
PTPRM-212ENST00000580838 NLRP6P59044 892 aa11.53□□□□□ -0.56
PTPRM-212ENST00000580838 TAOK2Q9UL54 1235 aa11.52□□□□□ -0.57
PTPRM-212ENST00000580838 STK24Q9Y6E0 443 aa11.52□□□□□ -0.57
PTPRM-212ENST00000580838 ZSWIM6Q9HCJ5 1215 aa11.5□□□□□ -0.57
PTPRM-212ENST00000580838 VARS2Q5ST30 1063 aaKnown RBP11.49□□□□□ -0.57
PTPRM-212ENST00000580838 GPR153Q6NV75 609 aa11.49□□□□□ -0.57
PTPRM-212ENST00000580838 MFRPQ9BY79 579 aa11.49□□□□□ -0.57
PTPRM-212ENST00000580838 ECM2O94769 699 aaPredicted RBP11.48□□□□□ -0.57
PTPRM-212ENST00000580838 STK25O00506 426 aa11.47□□□□□ -0.57
PTPRM-212ENST00000580838 PKD2Q13563 968 aa11.46□□□□□ -0.57
PTPRM-212ENST00000580838 RGL2O15211 777 aa11.44□□□□□ -0.58
PTPRM-212ENST00000580838 ARSIQ5FYB1 569 aa11.43□□□□□ -0.58
PTPRM-212ENST00000580838 ZNF687Q8N1G0 1237 aa11.4□□□□□ -0.58
PTPRM-212ENST00000580838 KHSRPQ92945 711 aaKnown RBP eCLIP11.4□□□□□ -0.58
PTPRM-212ENST00000580838 KIF3CO14782 793 aa11.39□□□□□ -0.59
PTPRM-212ENST00000580838 C2orf72A6NCS6 295 aa11.37□□□□□ -0.59
PTPRM-212ENST00000580838 ZNF316A6NFI3 1004 aaPredicted RBP11.34□□□□□ -0.59
PTPRM-212ENST00000580838 RNF166Q96A37 237 aaPredicted RBP11.31□□□□□ -0.6
PTPRM-212ENST00000580838 PPP1R37O75864 691 aa11.3□□□□□ -0.6
PTPRM-212ENST00000580838 MYT1LQ9UL68 1186 aa11.29□□□□□ -0.6
PTPRM-212ENST00000580838 NUDT7P0C024 238 aa11.27□□□□□ -0.61
PTPRM-212ENST00000580838 SLC34A2O95436 690 aa11.26□□□□□ -0.61
PTPRM-212ENST00000580838 TMC2Q8TDI7 906 aa11.26□□□□□ -0.61
PTPRM-212ENST00000580838 PCDHGA4Q9Y5G9 962 aa11.25□□□□□ -0.61
PTPRM-212ENST00000580838 ANKRD13DQ6ZTN6 518 aa11.24□□□□□ -0.61
PTPRM-212ENST00000580838 LHX6Q9UPM6 363 aa11.23□□□□□ -0.61
PTPRM-212ENST00000580838 LSM11P83369 360 aaKnown RBP eCLIP11.21□□□□□ -0.61
PTPRM-212ENST00000580838 PTGER2P43116 358 aa11.2□□□□□ -0.62
PTPRM-212ENST00000580838 POTEEQ6S8J3 1075 aa11.19□□□□□ -0.62
PTPRM-212ENST00000580838 HS6ST3Q8IZP7 471 aa11.18□□□□□ -0.62
PTPRM-212ENST00000580838 PBX2P40425 430 aa11.17□□□□□ -0.62
PTPRM-212ENST00000580838 AXIN2Q9Y2T1 843 aa11.16□□□□□ -0.62
PTPRM-212ENST00000580838 KDM4FA0A1W2PPD8 638 aa11.13□□□□□ -0.63
PTPRM-212ENST00000580838 FOXK1P85037 733 aa11.12□□□□□ -0.63
PTPRM-212ENST00000580838 PTCD2Q8WV60 388 aaKnown RBP11.12□□□□□ -0.63
PTPRM-212ENST00000580838 PLPP6Q8IY26 295 aa11.11□□□□□ -0.63
PTPRM-212ENST00000580838 CHGAP10645 457 aaKnown RBP11.1□□□□□ -0.63
PTPRM-212ENST00000580838 GPHNQ9NQX3 736 aaPredicted RBP11.1□□□□□ -0.63
PTPRM-212ENST00000580838 DSG2Q14126 1118 aa11.08□□□□□ -0.64
PTPRM-212ENST00000580838 NKX1-1Q15270 411 aaPredicted RBP11.07□□□□□ -0.64
PTPRM-212ENST00000580838 PSDA5PKW4 1024 aaPredicted RBP11.06□□□□□ -0.64
PTPRM-212ENST00000580838 ARHGAP33O14559 1287 aa11.06□□□□□ -0.64
PTPRM-212ENST00000580838 DNAJC5Q9H3Z4 198 aa11.04□□□□□ -0.64
PTPRM-212ENST00000580838 ADGRD1Q6QNK2 874 aa11.03□□□□□ -0.64
PTPRM-212ENST00000580838 PSEN2P49810 448 aa11.01□□□□□ -0.65
PTPRM-212ENST00000580838 DMRTA1Q5VZB9 504 aa11.01□□□□□ -0.65
PTPRM-212ENST00000580838 TBC1D12O60347 775 aa10.99□□□□□ -0.65
PTPRM-212ENST00000580838 TK2O00142 265 aa10.97□□□□□ -0.65
PTPRM-212ENST00000580838 PPP4R3BQ5MIZ7 849 aa10.97□□□□□ -0.65
PTPRM-212ENST00000580838 HRO43593 1189 aa10.96□□□□□ -0.65
PTPRM-212ENST00000580838 OXER1Q8TDS5 423 aa10.96□□□□□ -0.65
PTPRM-212ENST00000580838 CRISPLD2Q9H0B8 497 aa10.96□□□□□ -0.65
PTPRM-212ENST00000580838 UPF1Q92900 1129 aaKnown RBP eCLIP10.94□□□□□ -0.66
PTPRM-212ENST00000580838 HCSTQ9UBK5 93 aa10.94□□□□□ -0.66
PTPRM-212ENST00000580838 RYDENQ9NUL5 291 aaKnown RBP10.93□□□□□ -0.66
PTPRM-212ENST00000580838 PPP1R15BQ5SWA1 713 aa10.91□□□□□ -0.66
PTPRM-212ENST00000580838 KCNK17Q96T54 332 aa10.91□□□□□ -0.66
PTPRM-212ENST00000580838 NCKAP5LQ9HCH0 1330 aa10.9□□□□□ -0.66
PTPRM-212ENST00000580838 PLA2G2EQ9NZK7 142 aa10.89□□□□□ -0.67
PTPRM-212ENST00000580838 GTPBP6O43824 516 aaPredicted RBP10.87□□□□□ -0.67
PTPRM-212ENST00000580838 ZNF454Q8N9F8 522 aa10.87□□□□□ -0.67
PTPRM-212ENST00000580838 PDE4AP27815 886 aa10.86□□□□□ -0.67
PTPRM-212ENST00000580838 KCTD12Q96CX2 325 aaKnown RBP10.85□□□□□ -0.67
PTPRM-212ENST00000580838 VPS9D1Q9Y2B5 631 aa10.85□□□□□ -0.67
PTPRM-212ENST00000580838 FOSBP53539 338 aa10.84□□□□□ -0.67
PTPRM-212ENST00000580838 KCNH8Q96L42 1107 aa10.84□□□□□ -0.67
PTPRM-212ENST00000580838 BCL2L12Q9HB09 334 aa10.84□□□□□ -0.67
PTPRM-212ENST00000580838 ANO8Q9HCE9 1232 aaPredicted RBP10.83□□□□□ -0.68
PTPRM-212ENST00000580838 STAC3Q96MF2 364 aa10.82□□□□□ -0.68
PTPRM-212ENST00000580838 LARP6Q9BRS8 491 aaKnown RBP10.8□□□□□ -0.68
PTPRM-212ENST00000580838 SLC4A5Q9BY07 1137 aa10.8□□□□□ -0.68
PTPRM-212ENST00000580838 EVI5O60447 810 aa10.79□□□□□ -0.68
PTPRM-212ENST00000580838 DDX27Q96GQ7 796 aaKnown RBP10.78□□□□□ -0.68
PTPRM-212ENST00000580838 JPH4Q96JJ6 628 aa10.78□□□□□ -0.68
PTPRM-212ENST00000580838 MFSD10Q14728 455 aa10.77□□□□□ -0.69
PTPRM-212ENST00000580838 PTPREP23469 700 aa10.76□□□□□ -0.69
PTPRM-212ENST00000580838 ZBED2Q9BTP6 218 aa10.76□□□□□ -0.69
PTPRM-212ENST00000580838 BHMG1C9JSJ3 638 aaPredicted RBP10.75□□□□□ -0.69
PTPRM-212ENST00000580838 ADAM33Q9BZ11 813 aa10.75□□□□□ -0.69
PTPRM-212ENST00000580838 ZDHHC16Q969W1 377 aa10.74□□□□□ -0.69
PTPRM-212ENST00000580838 EMILIN3Q9NT22 766 aa10.74□□□□□ -0.69
PTPRM-212ENST00000580838 PTPN5P54829 565 aa10.73□□□□□ -0.69
PTPRM-212ENST00000580838 MAP3K9P80192 1104 aa10.73□□□□□ -0.69
PTPRM-212ENST00000580838 CADPS2Q86UW7 1296 aa10.72□□□□□ -0.69
PTPRM-212ENST00000580838 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.69
PTPRM-212ENST00000580838 THSD4Q6ZMP0 1018 aa10.69□□□□□ -0.7
PTPRM-212ENST00000580838 PCDHGA10Q9Y5H3 936 aa10.68□□□□□ -0.7
PTPRM-212ENST00000580838 MRPL50Q8N5N7 158 aaKnown RBP10.67□□□□□ -0.7
PTPRM-212ENST00000580838 GOLGA8CPA6NN73 597 aa10.66□□□□□ -0.7
PTPRM-212ENST00000580838 WNT2BQ93097 391 aa10.66□□□□□ -0.7
PTPRM-212ENST00000580838 PPP1R3GB7ZBB8 358 aa10.63□□□□□ -0.71
PTPRM-212ENST00000580838 COL9A1P20849 921 aa10.63□□□□□ -0.71
PTPRM-212ENST00000580838 NBPF3Q9H094 633 aa10.63□□□□□ -0.71
PTPRM-212ENST00000580838 PROX2Q3B8N5 592 aa10.62□□□□□ -0.71
PTPRM-212ENST00000580838 TYW1BQ6NUM6 668 aa10.61□□□□□ -0.71
PTPRM-212ENST00000580838 PHF14O94880 888 aa10.6□□□□□ -0.71
PTPRM-212ENST00000580838 IFFO2Q5TF58 517 aa10.6□□□□□ -0.71
PTPRM-212ENST00000580838 CAMK2BQ13554 666 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms