RNA–Protein interactions for RNA: ENST00000580787.5

TMEM220-205, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM220, Length 437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-205ENST00000580787 ZNF710Q8N1W2 664 aa12.05□□□□□ -0.48
TMEM220-205ENST00000580787 EMP3P54852 163 aa12.04□□□□□ -0.48
TMEM220-205ENST00000580787 CDAN1Q8IWY9 1227 aa12.04□□□□□ -0.48
TMEM220-205ENST00000580787 RIMBP2O15034 1052 aa12.03□□□□□ -0.48
TMEM220-205ENST00000580787 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
TMEM220-205ENST00000580787 KIF3CO14782 793 aa12.01□□□□□ -0.49
TMEM220-205ENST00000580787 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
TMEM220-205ENST00000580787 C2orf72A6NCS6 295 aa12□□□□□ -0.49
TMEM220-205ENST00000580787 DCAF8L2P0C7V8 631 aa12□□□□□ -0.49
TMEM220-205ENST00000580787 RYDENQ9NUL5 291 aaKnown RBP12□□□□□ -0.49
TMEM220-205ENST00000580787 ZSWIM6Q9HCJ5 1215 aa11.99□□□□□ -0.49
TMEM220-205ENST00000580787 TMC2Q8TDI7 906 aa11.96□□□□□ -0.49
TMEM220-205ENST00000580787 FAM205CA6NFA0 338 aa11.94□□□□□ -0.5
TMEM220-205ENST00000580787 HS3ST6Q96QI5 342 aa11.94□□□□□ -0.5
TMEM220-205ENST00000580787 AMER1Q5JTC6 1135 aaPredicted RBP11.92□□□□□ -0.5
TMEM220-205ENST00000580787 GPR153Q6NV75 609 aa11.92□□□□□ -0.5
TMEM220-205ENST00000580787 POTEB3A0JP26 581 aa11.91□□□□□ -0.5
TMEM220-205ENST00000580787 POTEBQ6S5H4 581 aa11.91□□□□□ -0.5
TMEM220-205ENST00000580787 ERBB3P21860 1342 aa11.88□□□□□ -0.51
TMEM220-205ENST00000580787 GTPBP6O43824 516 aaPredicted RBP11.87□□□□□ -0.51
TMEM220-205ENST00000580787 ARSIQ5FYB1 569 aa11.87□□□□□ -0.51
TMEM220-205ENST00000580787 SLC34A2O95436 690 aa11.86□□□□□ -0.51
TMEM220-205ENST00000580787 GPHNQ9NQX3 736 aaPredicted RBP11.85□□□□□ -0.51
TMEM220-205ENST00000580787 FOXK1P85037 733 aa11.84□□□□□ -0.51
TMEM220-205ENST00000580787 KHSRPQ92945 711 aaKnown RBP eCLIP11.82□□□□□ -0.52
TMEM220-205ENST00000580787 VARS2Q5ST30 1063 aaKnown RBP11.81□□□□□ -0.52
TMEM220-205ENST00000580787 RTN4Q9NQC3 1192 aaKnown RBP11.81□□□□□ -0.52
TMEM220-205ENST00000580787 PLPP6Q8IY26 295 aa11.8□□□□□ -0.52
TMEM220-205ENST00000580787 KRTAP3-3Q9BYR6 98 aa11.8□□□□□ -0.52
TMEM220-205ENST00000580787 KRTAP3-2Q9BYR7 98 aa11.8□□□□□ -0.52
TMEM220-205ENST00000580787 PCDHGA4Q9Y5G9 962 aa11.8□□□□□ -0.52
TMEM220-205ENST00000580787 DSG2Q14126 1118 aa11.78□□□□□ -0.52
TMEM220-205ENST00000580787 CRISPLD2Q9H0B8 497 aa11.78□□□□□ -0.52
TMEM220-205ENST00000580787 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
TMEM220-205ENST00000580787 NUDT7P0C024 238 aa11.76□□□□□ -0.53
TMEM220-205ENST00000580787 SLC24A1O60721 1099 aa11.75□□□□□ -0.53
TMEM220-205ENST00000580787 SPNS2Q8IVW8 549 aa11.75□□□□□ -0.53
TMEM220-205ENST00000580787 ZNF687Q8N1G0 1237 aa11.75□□□□□ -0.53
TMEM220-205ENST00000580787 PTCD2Q8WV60 388 aaKnown RBP11.75□□□□□ -0.53
TMEM220-205ENST00000580787 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
TMEM220-205ENST00000580787 PDE4AP27815 886 aa11.73□□□□□ -0.53
TMEM220-205ENST00000580787 NCKAP5LQ9HCH0 1330 aa11.71□□□□□ -0.53
TMEM220-205ENST00000580787 MMRN1Q13201 1228 aa11.7□□□□□ -0.54
TMEM220-205ENST00000580787 PPP1R15BQ5SWA1 713 aa11.7□□□□□ -0.54
TMEM220-205ENST00000580787 LHX6Q9UPM6 363 aa11.7□□□□□ -0.54
TMEM220-205ENST00000580787 CCDC180Q9P1Z9 1646 aa11.69□□□□□ -0.54
TMEM220-205ENST00000580787 TBC1D12O60347 775 aa11.68□□□□□ -0.54
TMEM220-205ENST00000580787 KDM4FA0A1W2PPD8 638 aa11.66□□□□□ -0.54
TMEM220-205ENST00000580787 LARP6Q9BRS8 491 aaKnown RBP11.65□□□□□ -0.54
TMEM220-205ENST00000580787 OXER1Q8TDS5 423 aa11.64□□□□□ -0.55
TMEM220-205ENST00000580787 DDX27Q96GQ7 796 aaKnown RBP11.64□□□□□ -0.55
TMEM220-205ENST00000580787 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
TMEM220-205ENST00000580787 MFSD10Q14728 455 aa11.63□□□□□ -0.55
TMEM220-205ENST00000580787 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.63□□□□□ -0.55
TMEM220-205ENST00000580787 CADPS2Q86UW7 1296 aa11.62□□□□□ -0.55
TMEM220-205ENST00000580787 UPF1Q92900 1129 aaKnown RBP eCLIP11.62□□□□□ -0.55
TMEM220-205ENST00000580787 ABCC9O60706 1549 aa11.61□□□□□ -0.55
TMEM220-205ENST00000580787 PBX2P40425 430 aa11.6□□□□□ -0.55
TMEM220-205ENST00000580787 SPRYD3Q8NCJ5 442 aa11.6□□□□□ -0.55
TMEM220-205ENST00000580787 LSM11P83369 360 aaKnown RBP eCLIP11.55□□□□□ -0.56
TMEM220-205ENST00000580787 POTEEQ6S8J3 1075 aa11.55□□□□□ -0.56
TMEM220-205ENST00000580787 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
TMEM220-205ENST00000580787 ANKRD13DQ6ZTN6 518 aa11.53□□□□□ -0.56
TMEM220-205ENST00000580787 AXIN2Q9Y2T1 843 aa11.52□□□□□ -0.57
TMEM220-205ENST00000580787 PTGER2P43116 358 aa11.51□□□□□ -0.57
TMEM220-205ENST00000580787 PAXIP1Q6ZW49 1069 aaPredicted RBP11.51□□□□□ -0.57
TMEM220-205ENST00000580787 ARHGAP33O14559 1287 aa11.5□□□□□ -0.57
TMEM220-205ENST00000580787 MAP3K9P80192 1104 aa11.5□□□□□ -0.57
TMEM220-205ENST00000580787 CFAP44Q96MT7 982 aa11.5□□□□□ -0.57
TMEM220-205ENST00000580787 EMILIN3Q9NT22 766 aa11.5□□□□□ -0.57
TMEM220-205ENST00000580787 EVI5O60447 810 aa11.49□□□□□ -0.57
TMEM220-205ENST00000580787 ANO8Q9HCE9 1232 aaPredicted RBP11.49□□□□□ -0.57
TMEM220-205ENST00000580787 MYT1LQ9UL68 1186 aa11.48□□□□□ -0.57
TMEM220-205ENST00000580787 CAMK2BQ13554 666 aa11.47□□□□□ -0.57
TMEM220-205ENST00000580787 ZNF454Q8N9F8 522 aa11.46□□□□□ -0.57
TMEM220-205ENST00000580787 RNF166Q96A37 237 aaPredicted RBP11.46□□□□□ -0.57
TMEM220-205ENST00000580787 FOSBP53539 338 aa11.45□□□□□ -0.58
TMEM220-205ENST00000580787 PSEN2P49810 448 aa11.43□□□□□ -0.58
TMEM220-205ENST00000580787 JPH4Q96JJ6 628 aa11.43□□□□□ -0.58
TMEM220-205ENST00000580787 KCNH8Q96L42 1107 aa11.42□□□□□ -0.58
TMEM220-205ENST00000580787 TK2O00142 265 aa11.41□□□□□ -0.58
TMEM220-205ENST00000580787 DMRTA1Q5VZB9 504 aa11.41□□□□□ -0.58
TMEM220-205ENST00000580787 ADGRD1Q6QNK2 874 aa11.41□□□□□ -0.58
TMEM220-205ENST00000580787 BCL2L12Q9HB09 334 aa11.41□□□□□ -0.58
TMEM220-205ENST00000580787 KCNK17Q96T54 332 aa11.4□□□□□ -0.58
TMEM220-205ENST00000580787 DPYSL4O14531 572 aa11.37□□□□□ -0.59
TMEM220-205ENST00000580787 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
TMEM220-205ENST00000580787 PTPREP23469 700 aa11.35□□□□□ -0.59
TMEM220-205ENST00000580787 ADAM33Q9BZ11 813 aa11.34□□□□□ -0.59
TMEM220-205ENST00000580787 WDR70Q9NW82 654 aa11.34□□□□□ -0.59
TMEM220-205ENST00000580787 HRO43593 1189 aa11.33□□□□□ -0.6
TMEM220-205ENST00000580787 PCDHGA10Q9Y5H3 936 aa11.33□□□□□ -0.6
TMEM220-205ENST00000580787 PHF14O94880 888 aa11.32□□□□□ -0.6
TMEM220-205ENST00000580787 SLC4A5Q9BY07 1137 aa11.32□□□□□ -0.6
TMEM220-205ENST00000580787 E2F4Q16254 413 aa11.31□□□□□ -0.6
TMEM220-205ENST00000580787 TYW1BQ6NUM6 668 aa11.3□□□□□ -0.6
TMEM220-205ENST00000580787 FBXW7Q969H0 707 aa11.3□□□□□ -0.6
TMEM220-205ENST00000580787 VPS9D1Q9Y2B5 631 aa11.3□□□□□ -0.6
TMEM220-205ENST00000580787 EPAS1Q99814 870 aa11.28□□□□□ -0.6
TMEM220-205ENST00000580787 ZBED2Q9BTP6 218 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms