RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-208ENST00000580584 EFCAB2Q5VUJ9 269 aa24.96■■□□□ 1.59
PMP22-208ENST00000580584 POGZQ7Z3K3 1410 aa24.95■■□□□ 1.59
PMP22-208ENST00000580584 ZMYM4Q5VZL5 1548 aa24.95■■□□□ 1.58
PMP22-208ENST00000580584 PREX2Q70Z35 1606 aa24.9■■□□□ 1.58
PMP22-208ENST00000580584 YEATS2Q9ULM3 1422 aa24.9■■□□□ 1.58
PMP22-208ENST00000580584 ZFYVE16Q7Z3T8 1539 aa24.9■■□□□ 1.58
PMP22-208ENST00000580584 CDC42BPBQ9Y5S2 1711 aa24.88■■□□□ 1.57
PMP22-208ENST00000580584 ARID4BQ4LE39 1312 aaPredicted RBP24.86■■□□□ 1.57
PMP22-208ENST00000580584 MAGI2Q86UL8 1455 aa24.85■■□□□ 1.57
PMP22-208ENST00000580584 MTUS2Q5JR59 1369 aa24.84■■□□□ 1.57
PMP22-208ENST00000580584 CDC42BPAQ5VT25 1732 aa24.83■■□□□ 1.57
PMP22-208ENST00000580584 ZNF518AQ6AHZ1 1483 aa24.83■■□□□ 1.56
PMP22-208ENST00000580584 ABCC1P33527 1531 aa24.82■■□□□ 1.56
PMP22-208ENST00000580584 ADAMTSL3P82987 1691 aa24.81■■□□□ 1.56
PMP22-208ENST00000580584 BCORL1Q5H9F3 1711 aa24.81■■□□□ 1.56
PMP22-208ENST00000580584 AFAP1Q8N556 730 aa24.8■■□□□ 1.56
PMP22-208ENST00000580584 SIGLEC1Q9BZZ2 1709 aa24.8■■□□□ 1.56
PMP22-208ENST00000580584 ARHGEF12Q9NZN5 1544 aa24.8■■□□□ 1.56
PMP22-208ENST00000580584 GPATCH8Q9UKJ3 1502 aaKnown RBP24.8■■□□□ 1.56
PMP22-208ENST00000580584 KDM5CP41229 1560 aa24.8■■□□□ 1.56
PMP22-208ENST00000580584 EHBP1L1Q8N3D4 1523 aa24.78■■□□□ 1.56
PMP22-208ENST00000580584 VPS8Q8N3P4 1428 aa24.77■■□□□ 1.56
PMP22-208ENST00000580584 TRAPPC8Q9Y2L5 1435 aa24.77■■□□□ 1.56
PMP22-208ENST00000580584 ZNF777Q9ULD5 760 aaPredicted RBP24.76■■□□□ 1.55
PMP22-208ENST00000580584 MADDQ8WXG6 1647 aa24.75■■□□□ 1.55
PMP22-208ENST00000580584 CCNB3Q8WWL7 1395 aa24.75■■□□□ 1.55
PMP22-208ENST00000580584 SAMD9LQ8IVG5 1584 aa24.75■■□□□ 1.55
PMP22-208ENST00000580584 ITSN2Q9NZM3 1697 aa24.75■■□□□ 1.55
PMP22-208ENST00000580584 PTPRMP28827 1452 aa24.74■■□□□ 1.55
PMP22-208ENST00000580584 HECW2Q9P2P5 1572 aa24.74■■□□□ 1.55
PMP22-208ENST00000580584 ATP10AO60312 1499 aa24.73■■□□□ 1.55
PMP22-208ENST00000580584 C9orf84Q5VXU9 1444 aa24.73■■□□□ 1.55
PMP22-208ENST00000580584 MYT1LQ9UL68 1186 aa24.72■■□□□ 1.55
PMP22-208ENST00000580584 TIAM1Q13009 1591 aa24.71■■□□□ 1.55
PMP22-208ENST00000580584 SYCP2Q9BX26 1530 aa24.71■■□□□ 1.55
PMP22-208ENST00000580584 CFDP1Q9UEE9 299 aaPredicted RBP24.7■■□□□ 1.54
PMP22-208ENST00000580584 DIP2CQ9Y2E4 1556 aa24.69■■□□□ 1.54
PMP22-208ENST00000580584 MLH3Q9UHC1 1453 aa24.69■■□□□ 1.54
PMP22-208ENST00000580584 MLECQ14165 292 aa24.68■■□□□ 1.54
PMP22-208ENST00000580584 ABCA6Q8N139 1617 aa24.68■■□□□ 1.54
PMP22-208ENST00000580584 RIMS1Q86UR5 1692 aaKnown RBP24.66■■□□□ 1.54
PMP22-208ENST00000580584 HNRNPMP52272 730 aaKnown RBP eCLIP24.65■■□□□ 1.54
PMP22-208ENST00000580584 NCOA2Q15596 1464 aa24.64■■□□□ 1.53
PMP22-208ENST00000580584 PLEKHH2Q8IVE3 1493 aa24.63■■□□□ 1.53
PMP22-208ENST00000580584 KIAA1107Q9UPP5 1409 aa24.62■■□□□ 1.53
PMP22-208ENST00000580584 ZNF644Q9H582 1327 aaPredicted RBP24.61■■□□□ 1.53
PMP22-208ENST00000580584 SUPT6HQ7KZ85 1726 aaKnown RBP24.61■■□□□ 1.53
PMP22-208ENST00000580584 KIDINS220Q9ULH0 1771 aa24.6■■□□□ 1.53
PMP22-208ENST00000580584 REREQ9P2R6 1566 aa24.6■■□□□ 1.53
PMP22-208ENST00000580584 LRRC9Q6ZRR7 1453 aa24.6■■□□□ 1.53
PMP22-208ENST00000580584 PLPPR3Q6T4P5 718 aa24.58■■□□□ 1.53
PMP22-208ENST00000580584 SPAG9O60271 1321 aaKnown RBP24.58■■□□□ 1.52
PMP22-208ENST00000580584 FER1L4A9Z1Z3 1794 aa24.56■■□□□ 1.52
PMP22-208ENST00000580584 KANK4Q5T7N3 995 aaPredicted RBP24.55■■□□□ 1.52
PMP22-208ENST00000580584 ATP7AQ04656 1500 aa24.54■■□□□ 1.52
PMP22-208ENST00000580584 MAP3K1Q13233 1512 aa24.54■■□□□ 1.52
PMP22-208ENST00000580584 INO80Q9ULG1 1556 aaPredicted RBP24.54■■□□□ 1.52
PMP22-208ENST00000580584 MBD5Q9P267 1494 aa24.53■■□□□ 1.52
PMP22-208ENST00000580584 AGLP35573 1532 aa24.52■■□□□ 1.52
PMP22-208ENST00000580584 CAMSAP2Q08AD1 1489 aa24.51■■□□□ 1.51
PMP22-208ENST00000580584 LMTK3Q96Q04 1460 aa24.47■■□□□ 1.51
PMP22-208ENST00000580584 A2MP01023 1474 aa24.44■■□□□ 1.5
PMP22-208ENST00000580584 CCDC141Q6ZP82 1450 aa24.44■■□□□ 1.5
PMP22-208ENST00000580584 PLXNC1O60486 1568 aa24.43■■□□□ 1.5
PMP22-208ENST00000580584 CEBPAP49715 358 aaPredicted RBP24.43■■□□□ 1.5
PMP22-208ENST00000580584 APLP2Q06481 763 aa24.41■■□□□ 1.5
PMP22-208ENST00000580584 RTEL1-TNFRSF6BF6WH68 1400 aa24.39■■□□□ 1.5
PMP22-208ENST00000580584 MYOM3Q5VTT5 1437 aa24.39■■□□□ 1.5
PMP22-208ENST00000580584 ESF1Q9H501 851 aaKnown RBP24.37■■□□□ 1.49
PMP22-208ENST00000580584 ARHGEF5Q12774 1597 aa24.37■■□□□ 1.49
PMP22-208ENST00000580584 ADGBQ8N7X0 1667 aa24.36■■□□□ 1.49
PMP22-208ENST00000580584 HSPA2P54652 639 aa24.35■■□□□ 1.49
PMP22-208ENST00000580584 MIA2Q96PC5 1412 aa24.35■■□□□ 1.49
PMP22-208ENST00000580584 CNTLNQ9NXG0 1405 aa24.33■■□□□ 1.49
PMP22-208ENST00000580584 C3P01024 1663 aa24.33■■□□□ 1.49
PMP22-208ENST00000580584 RSPH4AQ5TD94 716 aa24.32■■□□□ 1.48
PMP22-208ENST00000580584 GGT6Q6P531 493 aa24.3■■□□□ 1.48
PMP22-208ENST00000580584 DHX29Q7Z478 1369 aaKnown RBP24.29■■□□□ 1.48
PMP22-208ENST00000580584 PREX1Q8TCU6 1659 aa24.29■■□□□ 1.48
PMP22-208ENST00000580584 TSPY4P0CV99 314 aa24.28■■□□□ 1.48
PMP22-208ENST00000580584 TSPY10P0CW01 314 aa24.28■■□□□ 1.48
PMP22-208ENST00000580584 UHRF1BP1Q6BDS2 1440 aa24.26■■□□□ 1.47
PMP22-208ENST00000580584 MROH2AA6NES4 1674 aa24.25■■□□□ 1.47
PMP22-208ENST00000580584 CLTCQ00610 1675 aaKnown RBP24.25■■□□□ 1.47
PMP22-208ENST00000580584 MAST1Q9Y2H9 1570 aa24.25■■□□□ 1.47
PMP22-208ENST00000580584 ZMYM3Q14202 1370 aa24.24■■□□□ 1.47
PMP22-208ENST00000580584 PTPN23Q9H3S7 1636 aa24.24■■□□□ 1.47
PMP22-208ENST00000580584 FGD6Q6ZV73 1430 aa24.23■■□□□ 1.47
PMP22-208ENST00000580584 KIF3BO15066 747 aa24.22■■□□□ 1.47
PMP22-208ENST00000580584 TCOF1Q13428 1488 aaKnown RBP24.18■■□□□ 1.46
PMP22-208ENST00000580584 ABCC5O15440 1437 aa24.18■■□□□ 1.46
PMP22-208ENST00000580584 NPATQ14207 1427 aa24.18■■□□□ 1.46
PMP22-208ENST00000580584 PPP6R1Q9UPN7 881 aa24.16■■□□□ 1.46
PMP22-208ENST00000580584 PTPRKQ15262 1439 aa24.15■■□□□ 1.46
PMP22-208ENST00000580584 KDM5DQ9BY66 1539 aa24.15■■□□□ 1.46
PMP22-208ENST00000580584 CROCC2H7BZ55 1655 aa24.15■■□□□ 1.46
PMP22-208ENST00000580584 SHANK2Q9UPX8 1470 aa24.14■■□□□ 1.46
PMP22-208ENST00000580584 DAPK1P53355 1430 aa24.14■■□□□ 1.45
PMP22-208ENST00000580584 DNMT1P26358 1616 aaKnown RBP24.12■■□□□ 1.45
PMP22-208ENST00000580584 KIF15Q9NS87 1388 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms