RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 MYOM3Q5VTT5 1437 aa21.88■■□□□ 1.09
SKA2-205ENST00000580541 ITSN2Q9NZM3 1697 aa21.87■■□□□ 1.09
SKA2-205ENST00000580541 MIA2Q96PC5 1412 aa21.87■■□□□ 1.09
SKA2-205ENST00000580541 ARHGAP5Q13017 1502 aa21.85■■□□□ 1.09
SKA2-205ENST00000580541 ZNF777Q9ULD5 760 aaPredicted RBP21.85■■□□□ 1.09
SKA2-205ENST00000580541 CDC42BPAQ5VT25 1732 aa21.83■■□□□ 1.09
SKA2-205ENST00000580541 TSPOAP1O95153 1857 aa21.83■■□□□ 1.08
SKA2-205ENST00000580541 PREX2Q70Z35 1606 aa21.83■■□□□ 1.08
SKA2-205ENST00000580541 FANCAO15360 1455 aa21.83■■□□□ 1.08
SKA2-205ENST00000580541 CFAP74Q9C0B2 1584 aa21.82■■□□□ 1.08
SKA2-205ENST00000580541 NEO1Q92859 1461 aa21.81■■□□□ 1.08
SKA2-205ENST00000580541 CDC42BPBQ9Y5S2 1711 aa21.8■■□□□ 1.08
SKA2-205ENST00000580541 RSPH4AQ5TD94 716 aa21.8■■□□□ 1.08
SKA2-205ENST00000580541 PLEKHH2Q8IVE3 1493 aa21.79■■□□□ 1.08
SKA2-205ENST00000580541 FGD6Q6ZV73 1430 aa21.79■■□□□ 1.08
SKA2-205ENST00000580541 AKNAQ7Z591 1439 aa21.78■■□□□ 1.08
SKA2-205ENST00000580541 FAM50AQ14320 339 aaKnown RBP21.76■■□□□ 1.07
SKA2-205ENST00000580541 KIAA1107Q9UPP5 1409 aa21.74■■□□□ 1.07
SKA2-205ENST00000580541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.74■■□□□ 1.074e-8■■■■■ 44
SKA2-205ENST00000580541 PPRC1Q5VV67 1664 aaKnown RBP21.72■■□□□ 1.07
SKA2-205ENST00000580541 ADGRL1O94910 1474 aa21.71■■□□□ 1.07
SKA2-205ENST00000580541 PTPN23Q9H3S7 1636 aa21.71■■□□□ 1.07
SKA2-205ENST00000580541 ZNF644Q9H582 1327 aaPredicted RBP21.71■■□□□ 1.07
SKA2-205ENST00000580541 SCAPERQ9BY12 1400 aa21.71■■□□□ 1.07
SKA2-205ENST00000580541 RRBP1Q9P2E9 1410 aaKnown RBP21.71■■□□□ 1.07
SKA2-205ENST00000580541 CAMSAP2Q08AD1 1489 aa21.7■■□□□ 1.06
SKA2-205ENST00000580541 TSPY4P0CV99 314 aa21.69■■□□□ 1.06
SKA2-205ENST00000580541 TSPY10P0CW01 314 aa21.69■■□□□ 1.06
SKA2-205ENST00000580541 HNRNPMP52272 730 aaKnown RBP eCLIP21.69■■□□□ 1.06
SKA2-205ENST00000580541 TCOF1Q13428 1488 aaKnown RBP21.69■■□□□ 1.06
SKA2-205ENST00000580541 SAMD9LQ8IVG5 1584 aa21.67■■□□□ 1.06
SKA2-205ENST00000580541 DENND4BO75064 1496 aaPredicted RBP21.67■■□□□ 1.06
SKA2-205ENST00000580541 ABCC1P33527 1531 aa21.65■■□□□ 1.06
SKA2-205ENST00000580541 TRIM26Q12899 539 aaPredicted RBP21.62■■□□□ 1.05
SKA2-205ENST00000580541 MYT1LQ9UL68 1186 aa21.62■■□□□ 1.05
SKA2-205ENST00000580541 ZNF518AQ6AHZ1 1483 aa21.62■■□□□ 1.05
SKA2-205ENST00000580541 SYCP2Q9BX26 1530 aa21.61■■□□□ 1.05
SKA2-205ENST00000580541 AFAP1Q8N556 730 aa21.61■■□□□ 1.05
SKA2-205ENST00000580541 ARHGEF5Q12774 1597 aa21.61■■□□□ 1.05
SKA2-205ENST00000580541 MBD5Q9P267 1494 aa21.6■■□□□ 1.05
SKA2-205ENST00000580541 RAPGEF3O95398 923 aa21.6■■□□□ 1.05
SKA2-205ENST00000580541 CCDC141Q6ZP82 1450 aa21.59■■□□□ 1.05
SKA2-205ENST00000580541 SPAG9O60271 1321 aaKnown RBP21.58■■□□□ 1.05
SKA2-205ENST00000580541 POGZQ7Z3K3 1410 aa21.58■■□□□ 1.05
SKA2-205ENST00000580541 ARHGEF12Q9NZN5 1544 aa21.58■■□□□ 1.04
SKA2-205ENST00000580541 TRAPPC8Q9Y2L5 1435 aa21.57■■□□□ 1.04
SKA2-205ENST00000580541 ITGAEP38570 1179 aa21.57■■□□□ 1.04
SKA2-205ENST00000580541 KDM6BO15054 1643 aa21.56■■□□□ 1.04
SKA2-205ENST00000580541 DAPK1P53355 1430 aa21.55■■□□□ 1.04
SKA2-205ENST00000580541 ABCC5O15440 1437 aa21.55■■□□□ 1.04
SKA2-205ENST00000580541 DNMT1P26358 1616 aaKnown RBP21.54■■□□□ 1.04
SKA2-205ENST00000580541 RTEL1-TNFRSF6BF6WH68 1400 aa21.54■■□□□ 1.04
SKA2-205ENST00000580541 MAGI2Q86UL8 1455 aa21.53■■□□□ 1.04
SKA2-205ENST00000580541 RICTORQ6R327 1708 aa21.52■■□□□ 1.03
SKA2-205ENST00000580541 COL17A1Q9UMD9 1497 aaPredicted RBP21.52■■□□□ 1.03
SKA2-205ENST00000580541 MLH3Q9UHC1 1453 aa21.51■■□□□ 1.03
SKA2-205ENST00000580541 SHANK2Q9UPX8 1470 aa21.51■■□□□ 1.03
SKA2-205ENST00000580541 ANKRD30AQ9BXX3 1397 aa21.5■■□□□ 1.03
SKA2-205ENST00000580541 C9orf84Q5VXU9 1444 aa21.5■■□□□ 1.03
SKA2-205ENST00000580541 CHIC2Q9UKJ5 165 aa21.5■■□□□ 1.03
SKA2-205ENST00000580541 KDM5CP41229 1560 aa21.49■■□□□ 1.03
SKA2-205ENST00000580541 ZMYM4Q5VZL5 1548 aa21.47■■□□□ 1.03
SKA2-205ENST00000580541 ROCK1Q13464 1354 aa21.47■■□□□ 1.03
SKA2-205ENST00000580541 MAST1Q9Y2H9 1570 aa21.46■■□□□ 1.03
SKA2-205ENST00000580541 HECW2Q9P2P5 1572 aa21.45■■□□□ 1.02
SKA2-205ENST00000580541 CROCC2H7BZ55 1655 aa21.44■■□□□ 1.02
SKA2-205ENST00000580541 ATP7AQ04656 1500 aa21.44■■□□□ 1.02
SKA2-205ENST00000580541 FRMPD1Q5SYB0 1578 aa21.44■■□□□ 1.02
SKA2-205ENST00000580541 RRP7BPQ9NSQ0 103 aa21.43■■□□□ 1.02
SKA2-205ENST00000580541 NCOA1Q15788 1441 aa21.42■■□□□ 1.02
SKA2-205ENST00000580541 ADGRL2O95490 1459 aa21.41■■□□□ 1.02
SKA2-205ENST00000580541 PTPRKQ15262 1439 aa21.41■■□□□ 1.02
SKA2-205ENST00000580541 ZFYVE16Q7Z3T8 1539 aa21.4■■□□□ 1.02
SKA2-205ENST00000580541 INO80Q9ULG1 1556 aaPredicted RBP21.4■■□□□ 1.02
SKA2-205ENST00000580541 KIDINS220Q9ULH0 1771 aa21.39■■□□□ 1.01
SKA2-205ENST00000580541 ACIN1Q9UKV3 1341 aaKnown RBP21.39■■□□□ 1.01
SKA2-205ENST00000580541 ADGBQ8N7X0 1667 aa21.39■■□□□ 1.01
SKA2-205ENST00000580541 ATP10AO60312 1499 aa21.39■■□□□ 1.01
SKA2-205ENST00000580541 KIF15Q9NS87 1388 aa21.38■■□□□ 1.01
SKA2-205ENST00000580541 DHX29Q7Z478 1369 aaKnown RBP21.36■■□□□ 1.01
SKA2-205ENST00000580541 PLXNC1O60486 1568 aa21.36■■□□□ 1.01
SKA2-205ENST00000580541 YEATS2Q9ULM3 1422 aa21.35■■□□□ 1.01
SKA2-205ENST00000580541 DUOX2Q9NRD8 1548 aa21.34■■□□□ 1.01
SKA2-205ENST00000580541 PCGF6Q9BYE7 350 aa21.34■■□□□ 1.01
SKA2-205ENST00000580541 A2MP01023 1474 aa21.33■■□□□ 1.01
SKA2-205ENST00000580541 HFM1A2PYH4 1435 aa21.32■■□□□ 1
SKA2-205ENST00000580541 ARHGEF40Q8TER5 1519 aa21.32■■□□□ 1
SKA2-205ENST00000580541 DIP2CQ9Y2E4 1556 aa21.31■■□□□ 1
SKA2-205ENST00000580541 ANKRD50Q9ULJ7 1429 aa21.3■■□□□ 1
SKA2-205ENST00000580541 ARID4BQ4LE39 1312 aaPredicted RBP21.29■■□□□ 1
SKA2-205ENST00000580541 ERBINQ96RT1 1412 aa21.29■■□□□ 1
SKA2-205ENST00000580541 ABCA6Q8N139 1617 aa21.29■■□□□ 1
SKA2-205ENST00000580541 NAIPQ13075 1403 aa21.29■■□□□ 1
SKA2-205ENST00000580541 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
SKA2-205ENST00000580541 REREQ9P2R6 1566 aa21.28■■□□□ 1
SKA2-205ENST00000580541 KIF3BO15066 747 aa21.28■■□□□ 1
SKA2-205ENST00000580541 HRCP23327 699 aa21.28■■□□□ 1
SKA2-205ENST00000580541 PPP6R1Q9UPN7 881 aa21.25■□□□□ 0.99
SKA2-205ENST00000580541 AGLP35573 1532 aa21.24■□□□□ 0.99
SKA2-205ENST00000580541 GCC2Q8IWJ2 1684 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms