RNA–Protein interactions for RNA: ENST00000580186.1

TMEM220-204, Transcript of transmembrane protein 220, humanhuman

TSL 2

Gene TMEM220, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-204ENST00000580186 ARHGEF11O15085 1522 aa11.04□□□□□ -0.64
TMEM220-204ENST00000580186 HMGXB3Q12766 1538 aa11.04□□□□□ -0.64
TMEM220-204ENST00000580186 ARID3CA6NKF2 412 aa11.03□□□□□ -0.64
TMEM220-204ENST00000580186 PDS5BQ9NTI5 1447 aa11.02□□□□□ -0.64
TMEM220-204ENST00000580186 SMYD5Q6GMV2 418 aa11.02□□□□□ -0.65
TMEM220-204ENST00000580186 MKRN3Q13064 507 aaKnown RBP11.01□□□□□ -0.65
TMEM220-204ENST00000580186 CYB5RLQ6IPT4 315 aa11.01□□□□□ -0.65
TMEM220-204ENST00000580186 WDR62O43379 1518 aa10.99□□□□□ -0.65
TMEM220-204ENST00000580186 PDAP1Q13442 181 aaKnown RBP10.99□□□□□ -0.65
TMEM220-204ENST00000580186 RBM26Q5T8P6 1007 aaKnown RBP10.99□□□□□ -0.65
TMEM220-204ENST00000580186 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
TMEM220-204ENST00000580186 MRC2Q9UBG0 1479 aa10.99□□□□□ -0.65
TMEM220-204ENST00000580186 PRKAR2AP13861 404 aaKnown RBP10.98□□□□□ -0.65
TMEM220-204ENST00000580186 CHADLQ6NUI6 762 aa10.98□□□□□ -0.65
TMEM220-204ENST00000580186 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
TMEM220-204ENST00000580186 PCDHB8Q9UN66 801 aa10.98□□□□□ -0.65
TMEM220-204ENST00000580186 PCDHB13Q9Y5F0 798 aa10.98□□□□□ -0.65
TMEM220-204ENST00000580186 ZNF467Q7Z7K2 595 aaPredicted RBP10.96□□□□□ -0.65
TMEM220-204ENST00000580186 FARP1Q9Y4F1 1045 aaPredicted RBP10.96□□□□□ -0.65
TMEM220-204ENST00000580186 NCKAP5LQ9HCH0 1330 aa10.95□□□□□ -0.66
TMEM220-204ENST00000580186 APBB1O00213 710 aa10.95□□□□□ -0.66
TMEM220-204ENST00000580186 TRIM66O15016 1216 aa10.95□□□□□ -0.66
TMEM220-204ENST00000580186 PDE4DQ08499 809 aa10.94□□□□□ -0.66
TMEM220-204ENST00000580186 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
TMEM220-204ENST00000580186 GPIHBP1Q8IV16 184 aa10.92□□□□□ -0.66
TMEM220-204ENST00000580186 FBXO22Q8NEZ5 403 aa10.92□□□□□ -0.66
TMEM220-204ENST00000580186 MLLT3P42568 568 aaPredicted RBP10.91□□□□□ -0.66
TMEM220-204ENST00000580186 PSEN1P49768 467 aa10.91□□□□□ -0.66
TMEM220-204ENST00000580186 FAM117AQ9C073 453 aa10.9□□□□□ -0.66
TMEM220-204ENST00000580186 ARAP1Q96P48 1450 aa10.89□□□□□ -0.67
TMEM220-204ENST00000580186 NECTIN2Q92692 538 aa10.89□□□□□ -0.67
TMEM220-204ENST00000580186 TSPYL2Q9H2G4 693 aaPredicted RBP10.89□□□□□ -0.67
TMEM220-204ENST00000580186 PHF8Q9UPP1 1060 aa10.89□□□□□ -0.67
TMEM220-204ENST00000580186 BAZ1BQ9UIG0 1483 aaKnown RBP10.88□□□□□ -0.67
TMEM220-204ENST00000580186 ZNF316A6NFI3 1004 aaPredicted RBP10.88□□□□□ -0.67
TMEM220-204ENST00000580186 PDIA4P13667 645 aaKnown RBP10.87□□□□□ -0.67
TMEM220-204ENST00000580186 EFCAB3Q8N7B9 438 aa10.87□□□□□ -0.67
TMEM220-204ENST00000580186 SMARCA4P51532 1647 aa10.87□□□□□ -0.67
TMEM220-204ENST00000580186 ZBTB7CA1YPR0 619 aa10.86□□□□□ -0.67
TMEM220-204ENST00000580186 ARIH1Q9Y4X5 557 aaPredicted RBP10.86□□□□□ -0.67
TMEM220-204ENST00000580186 NLRP6P59044 892 aa10.85□□□□□ -0.67
TMEM220-204ENST00000580186 MFSD10Q14728 455 aa10.85□□□□□ -0.67
TMEM220-204ENST00000580186 PDE4AP27815 886 aa10.84□□□□□ -0.67
TMEM220-204ENST00000580186 CCDC9Q9Y3X0 531 aaKnown RBP10.84□□□□□ -0.67
TMEM220-204ENST00000580186 CADPSQ9ULU8 1353 aa10.84□□□□□ -0.67
TMEM220-204ENST00000580186 PLEKHG3A1L390 1219 aa10.83□□□□□ -0.68
TMEM220-204ENST00000580186 CCDC82Q8N4S0 544 aa10.8□□□□□ -0.68
TMEM220-204ENST00000580186 DDX27Q96GQ7 796 aaKnown RBP10.8□□□□□ -0.68
TMEM220-204ENST00000580186 CRISPLD2Q9H0B8 497 aa10.8□□□□□ -0.68
TMEM220-204ENST00000580186 CABP2Q9NPB3 220 aa10.8□□□□□ -0.68
TMEM220-204ENST00000580186 PEG3Q9GZU2 1588 aa10.79□□□□□ -0.68
TMEM220-204ENST00000580186 CAMK2BQ13554 666 aa10.79□□□□□ -0.68
TMEM220-204ENST00000580186 ZNF579Q8NAF0 562 aaKnown RBP10.78□□□□□ -0.68
TMEM220-204ENST00000580186 CEP164Q9UPV0 1460 aa10.77□□□□□ -0.69
TMEM220-204ENST00000580186 SOX12O15370 315 aa10.77□□□□□ -0.69
TMEM220-204ENST00000580186 FLIIQ13045 1269 aa10.77□□□□□ -0.69
TMEM220-204ENST00000580186 CLUAP1Q96AJ1 413 aa10.77□□□□□ -0.69
TMEM220-204ENST00000580186 PAK3O75914 559 aaPredicted RBP10.75□□□□□ -0.69
TMEM220-204ENST00000580186 POTEHQ6S545 545 aa10.74□□□□□ -0.69
TMEM220-204ENST00000580186 CCDC61Q9Y6R9 512 aa10.74□□□□□ -0.69
TMEM220-204ENST00000580186 MROH2BQ7Z745 1585 aa10.73□□□□□ -0.69
TMEM220-204ENST00000580186 GPR37O15354 613 aa10.73□□□□□ -0.69
TMEM220-204ENST00000580186 ONECUT3O60422 494 aaPredicted RBP10.73□□□□□ -0.69
TMEM220-204ENST00000580186 TRAK2O60296 914 aa10.72□□□□□ -0.69
TMEM220-204ENST00000580186 MS4A4AQ96JQ5 239 aa10.72□□□□□ -0.69
TMEM220-204ENST00000580186 DDRGK1Q96HY6 314 aa10.71□□□□□ -0.69
TMEM220-204ENST00000580186 ZNF608Q9ULD9 1512 aaPredicted RBP10.7□□□□□ -0.7
TMEM220-204ENST00000580186 FANCD2Q9BXW9 1451 aa10.7□□□□□ -0.7
TMEM220-204ENST00000580186 RSF1Q96T23 1441 aaPredicted RBP10.7□□□□□ -0.7
TMEM220-204ENST00000580186 IFNL1Q8IU54 200 aa10.7□□□□□ -0.7
TMEM220-204ENST00000580186 URB2Q14146 1524 aaKnown RBP10.69□□□□□ -0.7
TMEM220-204ENST00000580186 C19orf67A6NJJ6 358 aa10.69□□□□□ -0.7
TMEM220-204ENST00000580186 CD44P16070 742 aaKnown RBP10.69□□□□□ -0.7
TMEM220-204ENST00000580186 A6NJR5 290 aa10.68□□□□□ -0.7
TMEM220-204ENST00000580186 PARP9Q8IXQ6 854 aa10.68□□□□□ -0.7
TMEM220-204ENST00000580186 CCDC102AQ96A19 550 aa10.67□□□□□ -0.7
TMEM220-204ENST00000580186 DPYSL4O14531 572 aa10.66□□□□□ -0.7
TMEM220-204ENST00000580186 KCTD17Q8N5Z5 321 aa10.65□□□□□ -0.7
TMEM220-204ENST00000580186 KDM4FA0A1W2PPD8 638 aa10.64□□□□□ -0.71
TMEM220-204ENST00000580186 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
TMEM220-204ENST00000580186 MINK1Q8N4C8 1332 aaPredicted RBP10.63□□□□□ -0.71
TMEM220-204ENST00000580186 ZNF777Q9ULD5 760 aaPredicted RBP10.63□□□□□ -0.71
TMEM220-204ENST00000580186 CHD1O14646 1710 aa10.62□□□□□ -0.71
TMEM220-204ENST00000580186 KIF12Q96FN5 646 aa10.62□□□□□ -0.71
TMEM220-204ENST00000580186 EMILIN3Q9NT22 766 aa10.62□□□□□ -0.71
TMEM220-204ENST00000580186 AMHR2Q16671 573 aa10.61□□□□□ -0.71
TMEM220-204ENST00000580186 PPP1R15BQ5SWA1 713 aa10.61□□□□□ -0.71
TMEM220-204ENST00000580186 WIZO95785 1651 aa10.6□□□□□ -0.71
TMEM220-204ENST00000580186 IRF6O14896 467 aa10.6□□□□□ -0.71
TMEM220-204ENST00000580186 MAP2K5Q13163 448 aa10.6□□□□□ -0.71
TMEM220-204ENST00000580186 TRAIPQ9BWF2 469 aa10.6□□□□□ -0.71
TMEM220-204ENST00000580186 IFT140Q96RY7 1462 aa10.59□□□□□ -0.71
TMEM220-204ENST00000580186 MAP3K13O43283 966 aa10.58□□□□□ -0.72
TMEM220-204ENST00000580186 PDIA6Q15084 440 aa10.58□□□□□ -0.72
TMEM220-204ENST00000580186 AEBP1Q8IUX7 1158 aa10.58□□□□□ -0.72
TMEM220-204ENST00000580186 NUTM2FA1L443 756 aa10.57□□□□□ -0.72
TMEM220-204ENST00000580186 RAD21O60216 631 aa10.57□□□□□ -0.72
TMEM220-204ENST00000580186 MCM6Q14566 821 aa10.57□□□□□ -0.72
TMEM220-204ENST00000580186 GOPCQ9HD26 462 aa10.57□□□□□ -0.72
TMEM220-204ENST00000580186 SPDYE16A6NNV3 312 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms