RNA–Protein interactions for RNA: ENST00000580074.1

ERBB2-210, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-210ENST00000580074 ZFYVE16Q7Z3T8 1539 aa18.81■□□□□ 0.6
ERBB2-210ENST00000580074 POGZQ7Z3K3 1410 aa18.8■□□□□ 0.6
ERBB2-210ENST00000580074 SCAPERQ9BY12 1400 aa18.79■□□□□ 0.6
ERBB2-210ENST00000580074 PREX2Q70Z35 1606 aa18.78■□□□□ 0.6
ERBB2-210ENST00000580074 ARID4BQ4LE39 1312 aaPredicted RBP18.78■□□□□ 0.6
ERBB2-210ENST00000580074 ZNF518AQ6AHZ1 1483 aa18.77■□□□□ 0.59
ERBB2-210ENST00000580074 BCORL1Q5H9F3 1711 aa18.76■□□□□ 0.59
ERBB2-210ENST00000580074 ADAMTSL3P82987 1691 aa18.75■□□□□ 0.59
ERBB2-210ENST00000580074 CEP162Q5TB80 1403 aa18.73■□□□□ 0.59
ERBB2-210ENST00000580074 CDC42BPBQ9Y5S2 1711 aa18.71■□□□□ 0.59
ERBB2-210ENST00000580074 HECW2Q9P2P5 1572 aa18.7■□□□□ 0.58
ERBB2-210ENST00000580074 MTUS2Q5JR59 1369 aa18.69■□□□□ 0.58
ERBB2-210ENST00000580074 KDM5CP41229 1560 aa18.69■□□□□ 0.58
ERBB2-210ENST00000580074 C9orf84Q5VXU9 1444 aa18.69■□□□□ 0.58
ERBB2-210ENST00000580074 CDC42BPAQ5VT25 1732 aa18.69■□□□□ 0.58
ERBB2-210ENST00000580074 MADDQ8WXG6 1647 aa18.68■□□□□ 0.58
ERBB2-210ENST00000580074 PTPRMP28827 1452 aa18.68■□□□□ 0.58
ERBB2-210ENST00000580074 ABCC1P33527 1531 aa18.68■□□□□ 0.58
ERBB2-210ENST00000580074 YEATS2Q9ULM3 1422 aa18.67■□□□□ 0.58
ERBB2-210ENST00000580074 MYT1LQ9UL68 1186 aa18.67■□□□□ 0.58
ERBB2-210ENST00000580074 EHBP1L1Q8N3D4 1523 aa18.67■□□□□ 0.58
ERBB2-210ENST00000580074 ITSN2Q9NZM3 1697 aa18.66■□□□□ 0.58
ERBB2-210ENST00000580074 ATP10AO60312 1499 aa18.66■□□□□ 0.58
ERBB2-210ENST00000580074 PLEKHH2Q8IVE3 1493 aa18.65■□□□□ 0.58
ERBB2-210ENST00000580074 RIMS1Q86UR5 1692 aaKnown RBP18.64■□□□□ 0.57
ERBB2-210ENST00000580074 CCNB3Q8WWL7 1395 aa18.63■□□□□ 0.57
ERBB2-210ENST00000580074 MLH3Q9UHC1 1453 aa18.62■□□□□ 0.57
ERBB2-210ENST00000580074 REREQ9P2R6 1566 aa18.62■□□□□ 0.57
ERBB2-210ENST00000580074 FER1L4A9Z1Z3 1794 aa18.62■□□□□ 0.57
ERBB2-210ENST00000580074 GPATCH8Q9UKJ3 1502 aaKnown RBP18.59■□□□□ 0.57
ERBB2-210ENST00000580074 DIP2CQ9Y2E4 1556 aa18.59■□□□□ 0.57
ERBB2-210ENST00000580074 SAMD9LQ8IVG5 1584 aa18.58■□□□□ 0.56
ERBB2-210ENST00000580074 AFAP1Q8N556 730 aa18.57■□□□□ 0.56
ERBB2-210ENST00000580074 CFDP1Q9UEE9 299 aaPredicted RBP18.57■□□□□ 0.56
ERBB2-210ENST00000580074 ZNF777Q9ULD5 760 aaPredicted RBP18.57■□□□□ 0.56
ERBB2-210ENST00000580074 SYCP2Q9BX26 1530 aa18.57■□□□□ 0.56
ERBB2-210ENST00000580074 LOC105371045A0A1W2PR82 267 aa18.56■□□□□ 0.56
ERBB2-210ENST00000580074 SUPT6HQ7KZ85 1726 aaKnown RBP18.56■□□□□ 0.56
ERBB2-210ENST00000580074 VPS8Q8N3P4 1428 aa18.56■□□□□ 0.56
ERBB2-210ENST00000580074 KIAA1107Q9UPP5 1409 aa18.56■□□□□ 0.56
ERBB2-210ENST00000580074 ABCA6Q8N139 1617 aa18.56■□□□□ 0.56
ERBB2-210ENST00000580074 ARHGEF12Q9NZN5 1544 aa18.55■□□□□ 0.56
ERBB2-210ENST00000580074 TRAPPC8Q9Y2L5 1435 aa18.55■□□□□ 0.56
ERBB2-210ENST00000580074 SIGLEC1Q9BZZ2 1709 aa18.54■□□□□ 0.56
ERBB2-210ENST00000580074 TIAM1Q13009 1591 aa18.54■□□□□ 0.56
ERBB2-210ENST00000580074 AGLP35573 1532 aa18.54■□□□□ 0.56
ERBB2-210ENST00000580074 MLECQ14165 292 aa18.53■□□□□ 0.56
ERBB2-210ENST00000580074 KIDINS220Q9ULH0 1771 aa18.52■□□□□ 0.55
ERBB2-210ENST00000580074 ESF1Q9H501 851 aaKnown RBP18.51■□□□□ 0.55
ERBB2-210ENST00000580074 SPAG9O60271 1321 aaKnown RBP18.5■□□□□ 0.55
ERBB2-210ENST00000580074 ATP7AQ04656 1500 aa18.5■□□□□ 0.55
ERBB2-210ENST00000580074 MAP3K1Q13233 1512 aa18.48■□□□□ 0.55
ERBB2-210ENST00000580074 INO80Q9ULG1 1556 aaPredicted RBP18.47■□□□□ 0.55
ERBB2-210ENST00000580074 NCOA2Q15596 1464 aa18.46■□□□□ 0.55
ERBB2-210ENST00000580074 CNTLNQ9NXG0 1405 aa18.46■□□□□ 0.55
ERBB2-210ENST00000580074 LMTK3Q96Q04 1460 aa18.46■□□□□ 0.54
ERBB2-210ENST00000580074 ADGBQ8N7X0 1667 aa18.44■□□□□ 0.54
ERBB2-210ENST00000580074 PREX1Q8TCU6 1659 aa18.44■□□□□ 0.54
ERBB2-210ENST00000580074 HNRNPMP52272 730 aaKnown RBP eCLIP18.44■□□□□ 0.54
ERBB2-210ENST00000580074 PLPPR3Q6T4P5 718 aa18.43■□□□□ 0.54
ERBB2-210ENST00000580074 LRRC9Q6ZRR7 1453 aa18.43■□□□□ 0.54
ERBB2-210ENST00000580074 APLP2Q06481 763 aa18.42■□□□□ 0.54
ERBB2-210ENST00000580074 CAMSAP2Q08AD1 1489 aa18.41■□□□□ 0.54
ERBB2-210ENST00000580074 CCDC141Q6ZP82 1450 aa18.41■□□□□ 0.54
ERBB2-210ENST00000580074 RSPH4AQ5TD94 716 aa18.41■□□□□ 0.54
ERBB2-210ENST00000580074 RTEL1-TNFRSF6BF6WH68 1400 aa18.4■□□□□ 0.54
ERBB2-210ENST00000580074 A2MP01023 1474 aa18.4■□□□□ 0.54
ERBB2-210ENST00000580074 PLXNC1O60486 1568 aa18.4■□□□□ 0.54
ERBB2-210ENST00000580074 MROH2AA6NES4 1674 aa18.4■□□□□ 0.54
ERBB2-210ENST00000580074 UHRF1BP1Q6BDS2 1440 aa18.38■□□□□ 0.53
ERBB2-210ENST00000580074 SETD1BQ9UPS6 1966 aaKnown RBP18.37■□□□□ 0.53
ERBB2-210ENST00000580074 MBD5Q9P267 1494 aa18.37■□□□□ 0.53
ERBB2-210ENST00000580074 ARHGEF5Q12774 1597 aa18.37■□□□□ 0.53
ERBB2-210ENST00000580074 C3P01024 1663 aa18.37■□□□□ 0.53
ERBB2-210ENST00000580074 MIA2Q96PC5 1412 aa18.33■□□□□ 0.53
ERBB2-210ENST00000580074 ZNF644Q9H582 1327 aaPredicted RBP18.33■□□□□ 0.53
ERBB2-210ENST00000580074 FAM135AQ9P2D6 1515 aa18.33■□□□□ 0.52
ERBB2-210ENST00000580074 PPP6R1Q9UPN7 881 aa18.32■□□□□ 0.52
ERBB2-210ENST00000580074 MYOM3Q5VTT5 1437 aa18.32■□□□□ 0.52
ERBB2-210ENST00000580074 TSPY4P0CV99 314 aa18.31■□□□□ 0.52
ERBB2-210ENST00000580074 TSPY10P0CW01 314 aa18.31■□□□□ 0.52
ERBB2-210ENST00000580074 NPATQ14207 1427 aa18.31■□□□□ 0.52
ERBB2-210ENST00000580074 CEBPAP49715 358 aaPredicted RBP18.29■□□□□ 0.52
ERBB2-210ENST00000580074 CLTCQ00610 1675 aaKnown RBP18.28■□□□□ 0.52
ERBB2-210ENST00000580074 HSPA2P54652 639 aa18.28■□□□□ 0.52
ERBB2-210ENST00000580074 DHX29Q7Z478 1369 aaKnown RBP18.28■□□□□ 0.52
ERBB2-210ENST00000580074 MAST1Q9Y2H9 1570 aa18.27■□□□□ 0.52
ERBB2-210ENST00000580074 KANK4Q5T7N3 995 aaPredicted RBP18.27■□□□□ 0.52
ERBB2-210ENST00000580074 GGT6Q6P531 493 aa18.26■□□□□ 0.51
ERBB2-210ENST00000580074 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
ERBB2-210ENST00000580074 ZMYM3Q14202 1370 aa18.25■□□□□ 0.51
ERBB2-210ENST00000580074 KDM5DQ9BY66 1539 aa18.23■□□□□ 0.51
ERBB2-210ENST00000580074 EIF2AK4Q9P2K8 1649 aaKnown RBP18.22■□□□□ 0.51
ERBB2-210ENST00000580074 ZNF142P52746 1687 aaPredicted RBP18.2■□□□□ 0.5
ERBB2-210ENST00000580074 KIF3BO15066 747 aa18.2■□□□□ 0.5
ERBB2-210ENST00000580074 SHANK2Q9UPX8 1470 aa18.2■□□□□ 0.5
ERBB2-210ENST00000580074 MYO3AQ8NEV4 1616 aa18.2■□□□□ 0.5
ERBB2-210ENST00000580074 PTPN23Q9H3S7 1636 aa18.2■□□□□ 0.5
ERBB2-210ENST00000580074 ILDR1Q86SU0 546 aaPredicted RBP18.19■□□□□ 0.5
ERBB2-210ENST00000580074 CROCC2H7BZ55 1655 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms