RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 MS4A4AQ96JQ5 239 aa9.37□□□□□ -0.91
CDH8-206ENST00000580044 MMRN1Q13201 1228 aa9.35□□□□□ -0.91
CDH8-206ENST00000580044 RGL2O15211 777 aa9.32□□□□□ -0.92
CDH8-206ENST00000580044 FBXO22Q8NEZ5 403 aa9.32□□□□□ -0.92
CDH8-206ENST00000580044 TMC2Q8TDI7 906 aa9.32□□□□□ -0.92
CDH8-206ENST00000580044 PKD2Q13563 968 aa9.31□□□□□ -0.92
CDH8-206ENST00000580044 VARS2Q5ST30 1063 aaKnown RBP9.31□□□□□ -0.92
CDH8-206ENST00000580044 MFRPQ9BY79 579 aa9.31□□□□□ -0.92
CDH8-206ENST00000580044 TMEM92Q6UXU6 159 aa9.29□□□□□ -0.92
CDH8-206ENST00000580044 ARSIQ5FYB1 569 aa9.26□□□□□ -0.93
CDH8-206ENST00000580044 GPR153Q6NV75 609 aa9.26□□□□□ -0.93
CDH8-206ENST00000580044 RYDENQ9NUL5 291 aaKnown RBP9.26□□□□□ -0.93
CDH8-206ENST00000580044 CCDC180Q9P1Z9 1646 aa9.25□□□□□ -0.93
CDH8-206ENST00000580044 POTEB3A0JP26 581 aa9.25□□□□□ -0.93
CDH8-206ENST00000580044 POTEBQ6S5H4 581 aa9.25□□□□□ -0.93
CDH8-206ENST00000580044 ZNF687Q8N1G0 1237 aa9.25□□□□□ -0.93
CDH8-206ENST00000580044 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
CDH8-206ENST00000580044 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
CDH8-206ENST00000580044 C2orf72A6NCS6 295 aa9.23□□□□□ -0.93
CDH8-206ENST00000580044 PTGER2P43116 358 aa9.22□□□□□ -0.93
CDH8-206ENST00000580044 ZNF316A6NFI3 1004 aaPredicted RBP9.21□□□□□ -0.94
CDH8-206ENST00000580044 CHGAP10645 457 aaKnown RBP9.2□□□□□ -0.94
CDH8-206ENST00000580044 HS6ST3Q8IZP7 471 aa9.19□□□□□ -0.94
CDH8-206ENST00000580044 PSDA5PKW4 1024 aaPredicted RBP9.18□□□□□ -0.94
CDH8-206ENST00000580044 TBC1D12O60347 775 aa9.18□□□□□ -0.94
CDH8-206ENST00000580044 SLC34A2O95436 690 aa9.17□□□□□ -0.94
CDH8-206ENST00000580044 ANKRD13DQ6ZTN6 518 aa9.17□□□□□ -0.94
CDH8-206ENST00000580044 RNF166Q96A37 237 aaPredicted RBP9.17□□□□□ -0.94
CDH8-206ENST00000580044 MYT1LQ9UL68 1186 aa9.17□□□□□ -0.94
CDH8-206ENST00000580044 KIF3CO14782 793 aa9.16□□□□□ -0.94
CDH8-206ENST00000580044 NUDT7P0C024 238 aa9.15□□□□□ -0.94
CDH8-206ENST00000580044 PBX2P40425 430 aa9.15□□□□□ -0.94
CDH8-206ENST00000580044 PCDHGA4Q9Y5G9 962 aa9.15□□□□□ -0.94
CDH8-206ENST00000580044 KHSRPQ92945 711 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDH8-206ENST00000580044 KCNH8Q96L42 1107 aa9.13□□□□□ -0.95
CDH8-206ENST00000580044 PPP1R37O75864 691 aa9.12□□□□□ -0.95
CDH8-206ENST00000580044 ZCCHC6Q5VYS8 1495 aaKnown RBP9.1□□□□□ -0.95
CDH8-206ENST00000580044 DCAF8L2P0C7V8 631 aa9.1□□□□□ -0.95
CDH8-206ENST00000580044 LHX6Q9UPM6 363 aa9.1□□□□□ -0.95
CDH8-206ENST00000580044 LSM11P83369 360 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDH8-206ENST00000580044 FOXK1P85037 733 aa9.09□□□□□ -0.95
CDH8-206ENST00000580044 PLPP6Q8IY26 295 aa9.09□□□□□ -0.95
CDH8-206ENST00000580044 STAC3Q96MF2 364 aa9.09□□□□□ -0.95
CDH8-206ENST00000580044 GPHNQ9NQX3 736 aaPredicted RBP9.09□□□□□ -0.95
CDH8-206ENST00000580044 PTCD2Q8WV60 388 aaKnown RBP9.06□□□□□ -0.96
CDH8-206ENST00000580044 PPP4R3BQ5MIZ7 849 aa9.05□□□□□ -0.96
CDH8-206ENST00000580044 ARHGAP33O14559 1287 aa9.04□□□□□ -0.96
CDH8-206ENST00000580044 PDE4AP27815 886 aa9.03□□□□□ -0.96
CDH8-206ENST00000580044 DNAJC5Q9H3Z4 198 aa9.03□□□□□ -0.96
CDH8-206ENST00000580044 DSG2Q14126 1118 aa9.01□□□□□ -0.97
CDH8-206ENST00000580044 AXIN2Q9Y2T1 843 aa9□□□□□ -0.97
CDH8-206ENST00000580044 PPP1R15BQ5SWA1 713 aa8.96□□□□□ -0.98
CDH8-206ENST00000580044 ADGRD1Q6QNK2 874 aa8.96□□□□□ -0.98
CDH8-206ENST00000580044 UPF1Q92900 1129 aaKnown RBP eCLIP8.96□□□□□ -0.98
CDH8-206ENST00000580044 HCSTQ9UBK5 93 aa8.96□□□□□ -0.98
CDH8-206ENST00000580044 TK2O00142 265 aa8.95□□□□□ -0.98
CDH8-206ENST00000580044 NKX1-1Q15270 411 aaPredicted RBP8.94□□□□□ -0.98
CDH8-206ENST00000580044 SHROOM4Q9ULL8 1493 aa8.92□□□□□ -0.98
CDH8-206ENST00000580044 DCAF1Q9Y4B6 1507 aa8.91□□□□□ -0.98
CDH8-206ENST00000580044 MAP3K9P80192 1104 aa8.91□□□□□ -0.98
CDH8-206ENST00000580044 ZNF454Q8N9F8 522 aa8.91□□□□□ -0.98
CDH8-206ENST00000580044 OXER1Q8TDS5 423 aa8.91□□□□□ -0.98
CDH8-206ENST00000580044 DDX27Q96GQ7 796 aaKnown RBP8.91□□□□□ -0.98
CDH8-206ENST00000580044 KCNK17Q96T54 332 aa8.91□□□□□ -0.98
CDH8-206ENST00000580044 LARP6Q9BRS8 491 aaKnown RBP8.91□□□□□ -0.98
CDH8-206ENST00000580044 CRISPLD2Q9H0B8 497 aa8.91□□□□□ -0.98
CDH8-206ENST00000580044 GOLGA8CPA6NN73 597 aa8.89□□□□□ -0.99
CDH8-206ENST00000580044 PSEN2P49810 448 aa8.89□□□□□ -0.99
CDH8-206ENST00000580044 KDM4FA0A1W2PPD8 638 aa8.88□□□□□ -0.99
CDH8-206ENST00000580044 PTPREP23469 700 aa8.88□□□□□ -0.99
CDH8-206ENST00000580044 POTEEQ6S8J3 1075 aa8.88□□□□□ -0.99
CDH8-206ENST00000580044 GTPBP6O43824 516 aaPredicted RBP8.87□□□□□ -0.99
CDH8-206ENST00000580044 DMRTA1Q5VZB9 504 aa8.85□□□□□ -0.99
CDH8-206ENST00000580044 PLA2G2EQ9NZK7 142 aa8.85□□□□□ -0.99
CDH8-206ENST00000580044 EVI5O60447 810 aa8.84□□□□□ -0.99
CDH8-206ENST00000580044 KCTD12Q96CX2 325 aaKnown RBP8.84□□□□□ -0.99
CDH8-206ENST00000580044 BCL2L12Q9HB09 334 aa8.84□□□□□ -0.99
CDH8-206ENST00000580044 ZDHHC16Q969W1 377 aa8.83□□□□□ -1
CDH8-206ENST00000580044 NCKAP5LQ9HCH0 1330 aa8.82□□□□□ -1
CDH8-206ENST00000580044 JPH4Q96JJ6 628 aa8.82□□□□□ -1
CDH8-206ENST00000580044 HRO43593 1189 aa8.81□□□□□ -1
CDH8-206ENST00000580044 FOSBP53539 338 aa8.81□□□□□ -1
CDH8-206ENST00000580044 NBPF3Q9H094 633 aa8.81□□□□□ -1
CDH8-206ENST00000580044 SUPT5HO00267 1087 aaKnown RBP8.8□□□□□ -1
CDH8-206ENST00000580044 MRPL50Q8N5N7 158 aaKnown RBP8.8□□□□□ -1
CDH8-206ENST00000580044 SLC4A5Q9BY07 1137 aa8.8□□□□□ -1
CDH8-206ENST00000580044 ANO8Q9HCE9 1232 aaPredicted RBP8.8□□□□□ -1
CDH8-206ENST00000580044 VPS9D1Q9Y2B5 631 aa8.8□□□□□ -1
CDH8-206ENST00000580044 MFSD10Q14728 455 aa8.78□□□□□ -1
CDH8-206ENST00000580044 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.78□□□□□ -1
CDH8-206ENST00000580044 PTPN5P54829 565 aa8.77□□□□□ -1.01
CDH8-206ENST00000580044 FBXW7Q969H0 707 aa8.77□□□□□ -1.01
CDH8-206ENST00000580044 BBXQ8WY36 941 aaPredicted RBP8.75□□□□□ -1.01
CDH8-206ENST00000580044 TYW1BQ6NUM6 668 aa8.74□□□□□ -1.01
CDH8-206ENST00000580044 WNT2BQ93097 391 aa8.74□□□□□ -1.01
CDH8-206ENST00000580044 PHF14O94880 888 aa8.72□□□□□ -1.01
CDH8-206ENST00000580044 ZBED2Q9BTP6 218 aa8.72□□□□□ -1.01
CDH8-206ENST00000580044 ADAM33Q9BZ11 813 aa8.72□□□□□ -1.01
CDH8-206ENST00000580044 PPP1R3GB7ZBB8 358 aa8.71□□□□□ -1.02
CDH8-206ENST00000580044 SPRYD3Q8NCJ5 442 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms