RNA–Protein interactions for RNA: ENST00000580021.1

CASKIN2-203, Transcript of CASK interacting protein 2, humanhuman

TSL 3

Gene CASKIN2, Length 626 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN2-203ENST00000580021 SIGLEC1Q9BZZ2 1709 aa30.4■■■□□ 2.46
CASKIN2-203ENST00000580021 ILDR1Q86SU0 546 aaPredicted RBP30.39■■■□□ 2.46
CASKIN2-203ENST00000580021 RIMS1Q86UR5 1692 aaKnown RBP30.39■■■□□ 2.45
CASKIN2-203ENST00000580021 EFCAB2Q5VUJ9 269 aa30.38■■■□□ 2.45
CASKIN2-203ENST00000580021 TROQ12816 1431 aaPredicted RBP30.38■■■□□ 2.45
CASKIN2-203ENST00000580021 POGZQ7Z3K3 1410 aa30.36■■■□□ 2.45
CASKIN2-203ENST00000580021 PCF11O94913 1555 aaKnown RBP30.33■■■□□ 2.45
CASKIN2-203ENST00000580021 MAGI2Q86UL8 1455 aa30.33■■■□□ 2.45
CASKIN2-203ENST00000580021 CLIP1P30622 1438 aa30.31■■■□□ 2.44
CASKIN2-203ENST00000580021 PLPPR3Q6T4P5 718 aa30.3■■■□□ 2.44
CASKIN2-203ENST00000580021 ARHGAP5Q13017 1502 aa30.3■■■□□ 2.44
CASKIN2-203ENST00000580021 MLECQ14165 292 aa30.29■■■□□ 2.44
CASKIN2-203ENST00000580021 CASKIN1Q8WXD9 1431 aa30.29■■■□□ 2.44
CASKIN2-203ENST00000580021 CDC42BPBQ9Y5S2 1711 aa30.27■■■□□ 2.44
CASKIN2-203ENST00000580021 CCDC18Q5T9S5 1454 aa30.23■■■□□ 2.43
CASKIN2-203ENST00000580021 AFAP1Q8N556 730 aa30.22■■■□□ 2.43
CASKIN2-203ENST00000580021 ATP10AO60312 1499 aa30.22■■■□□ 2.43
CASKIN2-203ENST00000580021 FER1L4A9Z1Z3 1794 aa30.21■■■□□ 2.43
CASKIN2-203ENST00000580021 ZNF518AQ6AHZ1 1483 aa30.19■■■□□ 2.42
CASKIN2-203ENST00000580021 LMTK3Q96Q04 1460 aa30.19■■■□□ 2.42
CASKIN2-203ENST00000580021 MYT1LQ9UL68 1186 aa30.18■■■□□ 2.42
CASKIN2-203ENST00000580021 C9orf84Q5VXU9 1444 aa30.17■■■□□ 2.42
CASKIN2-203ENST00000580021 PREX2Q70Z35 1606 aa30.17■■■□□ 2.42
CASKIN2-203ENST00000580021 KDM5CP41229 1560 aa30.15■■■□□ 2.42
CASKIN2-203ENST00000580021 FYCO1Q9BQS8 1478 aa30.15■■■□□ 2.42
CASKIN2-203ENST00000580021 CDC42BPAQ5VT25 1732 aa30.14■■■□□ 2.42
CASKIN2-203ENST00000580021 ARHGEF12Q9NZN5 1544 aa30.11■■■□□ 2.41
CASKIN2-203ENST00000580021 HSPA2P54652 639 aa30.1■■■□□ 2.41
CASKIN2-203ENST00000580021 ITSN2Q9NZM3 1697 aa30.1■■■□□ 2.41
CASKIN2-203ENST00000580021 ABCC1P33527 1531 aa30.08■■■□□ 2.41
CASKIN2-203ENST00000580021 TRAPPC8Q9Y2L5 1435 aa30.08■■■□□ 2.41
CASKIN2-203ENST00000580021 DIP2CQ9Y2E4 1556 aa30.07■■■□□ 2.4
CASKIN2-203ENST00000580021 ABCA6Q8N139 1617 aa30.06■■■□□ 2.4
CASKIN2-203ENST00000580021 ZNF777Q9ULD5 760 aaPredicted RBP30.04■■■□□ 2.4
CASKIN2-203ENST00000580021 CEBPAP49715 358 aaPredicted RBP30.03■■■□□ 2.4
CASKIN2-203ENST00000580021 MLH3Q9UHC1 1453 aa30.03■■■□□ 2.4
CASKIN2-203ENST00000580021 KIDINS220Q9ULH0 1771 aa29.98■■■□□ 2.39
CASKIN2-203ENST00000580021 SAMD9LQ8IVG5 1584 aa29.98■■■□□ 2.39
CASKIN2-203ENST00000580021 REREQ9P2R6 1566 aa29.98■■■□□ 2.39
CASKIN2-203ENST00000580021 GPATCH8Q9UKJ3 1502 aaKnown RBP29.97■■■□□ 2.39
CASKIN2-203ENST00000580021 PREX1Q8TCU6 1659 aa29.92■■■□□ 2.38
CASKIN2-203ENST00000580021 HNRNPMP52272 730 aaKnown RBP eCLIP29.92■■■□□ 2.38
CASKIN2-203ENST00000580021 SYCP2Q9BX26 1530 aa29.91■■■□□ 2.38
CASKIN2-203ENST00000580021 FBXO41Q8TF61 875 aa29.89■■■□□ 2.38
CASKIN2-203ENST00000580021 AGLP35573 1532 aa29.89■■■□□ 2.38
CASKIN2-203ENST00000580021 MTUS2Q5JR59 1369 aa29.89■■■□□ 2.37
CASKIN2-203ENST00000580021 SETD1BQ9UPS6 1966 aaKnown RBP29.88■■■□□ 2.37
CASKIN2-203ENST00000580021 CFDP1Q9UEE9 299 aaPredicted RBP29.88■■■□□ 2.37
CASKIN2-203ENST00000580021 CCNB3Q8WWL7 1395 aa29.88■■■□□ 2.37
CASKIN2-203ENST00000580021 C3P01024 1663 aa29.86■■■□□ 2.37
CASKIN2-203ENST00000580021 CEP162Q5TB80 1403 aa29.85■■■□□ 2.37
CASKIN2-203ENST00000580021 ESF1Q9H501 851 aaKnown RBP29.84■■■□□ 2.37
CASKIN2-203ENST00000580021 SPAG9O60271 1321 aaKnown RBP29.84■■■□□ 2.37
CASKIN2-203ENST00000580021 SUPT6HQ7KZ85 1726 aaKnown RBP29.82■■■□□ 2.36
CASKIN2-203ENST00000580021 KIAA1107Q9UPP5 1409 aa29.79■■■□□ 2.36
CASKIN2-203ENST00000580021 PLEKHH2Q8IVE3 1493 aa29.79■■■□□ 2.36
CASKIN2-203ENST00000580021 TIAM1Q13009 1591 aa29.77■■■□□ 2.36
CASKIN2-203ENST00000580021 ATP7AQ04656 1500 aa29.77■■■□□ 2.36
CASKIN2-203ENST00000580021 EHBP1L1Q8N3D4 1523 aa29.77■■■□□ 2.36
CASKIN2-203ENST00000580021 UHRF1BP1Q6BDS2 1440 aa29.77■■■□□ 2.36
CASKIN2-203ENST00000580021 ZNF644Q9H582 1327 aaPredicted RBP29.76■■■□□ 2.36
CASKIN2-203ENST00000580021 STRCQ7RTU9 1775 aa29.75■■■□□ 2.35
CASKIN2-203ENST00000580021 INO80Q9ULG1 1556 aaPredicted RBP29.75■■■□□ 2.35
CASKIN2-203ENST00000580021 CNTLNQ9NXG0 1405 aa29.7■■■□□ 2.34
CASKIN2-203ENST00000580021 LOC105371045A0A1W2PR82 267 aa29.69■■■□□ 2.34
CASKIN2-203ENST00000580021 A2MP01023 1474 aa29.68■■■□□ 2.34
CASKIN2-203ENST00000580021 CERKQ8TCT0 537 aa29.67■■■□□ 2.34
CASKIN2-203ENST00000580021 PLXNC1O60486 1568 aa29.66■■■□□ 2.34
CASKIN2-203ENST00000580021 MROH2AA6NES4 1674 aa29.66■■■□□ 2.34
CASKIN2-203ENST00000580021 CLTCQ00610 1675 aaKnown RBP29.66■■■□□ 2.34
CASKIN2-203ENST00000580021 MBD5Q9P267 1494 aa29.65■■■□□ 2.34
CASKIN2-203ENST00000580021 ADGBQ8N7X0 1667 aa29.64■■■□□ 2.34
CASKIN2-203ENST00000580021 ZMYM3Q14202 1370 aa29.64■■■□□ 2.33
CASKIN2-203ENST00000580021 GGT6Q6P531 493 aa29.63■■■□□ 2.33
CASKIN2-203ENST00000580021 DMRT2Q9Y5R5 561 aa29.62■■■□□ 2.33
CASKIN2-203ENST00000580021 NCOA2Q15596 1464 aa29.61■■■□□ 2.33
CASKIN2-203ENST00000580021 NPATQ14207 1427 aa29.55■■■□□ 2.32
CASKIN2-203ENST00000580021 CAMSAP2Q08AD1 1489 aa29.54■■■□□ 2.32
CASKIN2-203ENST00000580021 RTEL1-TNFRSF6BF6WH68 1400 aa29.54■■■□□ 2.32
CASKIN2-203ENST00000580021 VPS8Q8N3P4 1428 aa29.52■■■□□ 2.32
CASKIN2-203ENST00000580021 CCDC141Q6ZP82 1450 aa29.5■■■□□ 2.31
CASKIN2-203ENST00000580021 PTPRTO14522 1441 aa29.5■■■□□ 2.31
CASKIN2-203ENST00000580021 DHX29Q7Z478 1369 aaKnown RBP29.49■■■□□ 2.31
CASKIN2-203ENST00000580021 CAMSAP1Q5T5Y3 1602 aa29.49■■■□□ 2.31
CASKIN2-203ENST00000580021 PTPRKQ15262 1439 aa29.48■■■□□ 2.31
CASKIN2-203ENST00000580021 NCOA1Q15788 1441 aa29.48■■■□□ 2.31
CASKIN2-203ENST00000580021 LRRC9Q6ZRR7 1453 aa29.47■■■□□ 2.31
CASKIN2-203ENST00000580021 MYO3AQ8NEV4 1616 aa29.46■■■□□ 2.31
CASKIN2-203ENST00000580021 PPP6R1Q9UPN7 881 aa29.46■■■□□ 2.31
CASKIN2-203ENST00000580021 KIF3BO15066 747 aa29.44■■■□□ 2.3
CASKIN2-203ENST00000580021 RSPH4AQ5TD94 716 aa29.44■■■□□ 2.3
CASKIN2-203ENST00000580021 KANK4Q5T7N3 995 aaPredicted RBP29.43■■■□□ 2.3
CASKIN2-203ENST00000580021 ZNF142P52746 1687 aaPredicted RBP29.41■■■□□ 2.3
CASKIN2-203ENST00000580021 NCKAP5LQ9HCH0 1330 aa29.41■■■□□ 2.3
CASKIN2-203ENST00000580021 ARHGEF5Q12774 1597 aa29.4■■■□□ 2.3
CASKIN2-203ENST00000580021 CEP170BQ9Y4F5 1589 aaPredicted RBP29.39■■■□□ 2.3
CASKIN2-203ENST00000580021 TSPY4P0CV99 314 aa29.38■■■□□ 2.29
CASKIN2-203ENST00000580021 TSPY10P0CW01 314 aa29.38■■■□□ 2.29
CASKIN2-203ENST00000580021 LTBP4Q8N2S1 1624 aa29.35■■■□□ 2.29
CASKIN2-203ENST00000580021 FBXO31Q5XUX0 539 aaPredicted RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms