RNA–Protein interactions for RNA: ENST00000579815.1

CLTC-211, Transcript of clathrin heavy chain, humanhuman

TSL 5

Gene CLTC, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-211ENST00000579815 C2orf72A6NCS6 295 aa11.85□□□□□ -0.51
CLTC-211ENST00000579815 KIF3CO14782 793 aa11.85□□□□□ -0.51
CLTC-211ENST00000579815 AMER1Q5JTC6 1135 aaPredicted RBP11.85□□□□□ -0.51
CLTC-211ENST00000579815 GTPBP6O43824 516 aaPredicted RBP11.83□□□□□ -0.52
CLTC-211ENST00000579815 POTEB3A0JP26 581 aa11.81□□□□□ -0.52
CLTC-211ENST00000579815 POTEBQ6S5H4 581 aa11.81□□□□□ -0.52
CLTC-211ENST00000579815 EMP3P54852 163 aa11.75□□□□□ -0.53
CLTC-211ENST00000579815 DOK7Q18PE1 504 aa11.75□□□□□ -0.53
CLTC-211ENST00000579815 KHSRPQ92945 711 aaKnown RBP eCLIP11.75□□□□□ -0.535e-8■□□□□ 8.5
CLTC-211ENST00000579815 CDAN1Q8IWY9 1227 aa11.74□□□□□ -0.53
CLTC-211ENST00000579815 HOXB1P14653 301 aaPredicted RBP11.73□□□□□ -0.53
CLTC-211ENST00000579815 ZNF710Q8N1W2 664 aa11.73□□□□□ -0.53
CLTC-211ENST00000579815 TMC2Q8TDI7 906 aa11.73□□□□□ -0.53
CLTC-211ENST00000579815 GPR153Q6NV75 609 aa11.72□□□□□ -0.53
CLTC-211ENST00000579815 FAM205CA6NFA0 338 aa11.71□□□□□ -0.53
CLTC-211ENST00000579815 ARSIQ5FYB1 569 aa11.7□□□□□ -0.54
CLTC-211ENST00000579815 HS3ST6Q96QI5 342 aa11.69□□□□□ -0.54
CLTC-211ENST00000579815 DSG2Q14126 1118 aa11.68□□□□□ -0.54
CLTC-211ENST00000579815 CCDC180Q9P1Z9 1646 aa11.68□□□□□ -0.54
CLTC-211ENST00000579815 CADPS2Q86UW7 1296 aa11.67□□□□□ -0.54
CLTC-211ENST00000579815 NCKAP5LQ9HCH0 1330 aa11.66□□□□□ -0.54
CLTC-211ENST00000579815 GPHNQ9NQX3 736 aaPredicted RBP11.66□□□□□ -0.54
CLTC-211ENST00000579815 PLSCR2Q9NRY7 297 aa11.66□□□□□ -0.54
CLTC-211ENST00000579815 RIMBP2O15034 1052 aa11.65□□□□□ -0.54
CLTC-211ENST00000579815 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.54
CLTC-211ENST00000579815 RYDENQ9NUL5 291 aaKnown RBP11.65□□□□□ -0.54
CLTC-211ENST00000579815 PLPP6Q8IY26 295 aa11.64□□□□□ -0.55
CLTC-211ENST00000579815 BBXQ8WY36 941 aaPredicted RBP11.63□□□□□ -0.55
CLTC-211ENST00000579815 ZSWIM6Q9HCJ5 1215 aa11.63□□□□□ -0.55
CLTC-211ENST00000579815 PCDH10Q9P2E7 1040 aa11.63□□□□□ -0.55
CLTC-211ENST00000579815 FOXK1P85037 733 aa11.62□□□□□ -0.55
CLTC-211ENST00000579815 KRTAP3-3Q9BYR6 98 aa11.61□□□□□ -0.55
CLTC-211ENST00000579815 KRTAP3-2Q9BYR7 98 aa11.61□□□□□ -0.55
CLTC-211ENST00000579815 PCDHGA4Q9Y5G9 962 aa11.61□□□□□ -0.55
CLTC-211ENST00000579815 NUDT7P0C024 238 aa11.6□□□□□ -0.55
CLTC-211ENST00000579815 VARS2Q5ST30 1063 aaKnown RBP11.6□□□□□ -0.55
CLTC-211ENST00000579815 ERBB3P21860 1342 aa11.6□□□□□ -0.55
CLTC-211ENST00000579815 SLC34A2O95436 690 aa11.58□□□□□ -0.56
CLTC-211ENST00000579815 PPP1R15BQ5SWA1 713 aa11.55□□□□□ -0.56
CLTC-211ENST00000579815 KDM4FA0A1W2PPD8 638 aa11.53□□□□□ -0.56
CLTC-211ENST00000579815 ZNF316A6NFI3 1004 aaPredicted RBP11.53□□□□□ -0.56
CLTC-211ENST00000579815 LARP6Q9BRS8 491 aaKnown RBP11.53□□□□□ -0.56
CLTC-211ENST00000579815 PTCD2Q8WV60 388 aaKnown RBP11.52□□□□□ -0.57
CLTC-211ENST00000579815 UPF1Q92900 1129 aaKnown RBP eCLIP11.52□□□□□ -0.57
CLTC-211ENST00000579815 LHX6Q9UPM6 363 aa11.52□□□□□ -0.57
CLTC-211ENST00000579815 PDE4AP27815 886 aa11.5□□□□□ -0.57
CLTC-211ENST00000579815 PAXIP1Q6ZW49 1069 aaPredicted RBP11.5□□□□□ -0.57
CLTC-211ENST00000579815 MFSD10Q14728 455 aa11.49□□□□□ -0.57
CLTC-211ENST00000579815 SPRYD3Q8NCJ5 442 aa11.49□□□□□ -0.57
CLTC-211ENST00000579815 OXER1Q8TDS5 423 aa11.49□□□□□ -0.57
CLTC-211ENST00000579815 CFAP44Q96MT7 982 aa11.49□□□□□ -0.57
CLTC-211ENST00000579815 SPNS2Q8IVW8 549 aa11.46□□□□□ -0.57
CLTC-211ENST00000579815 DDX27Q96GQ7 796 aaKnown RBP11.46□□□□□ -0.57
CLTC-211ENST00000579815 POTEEQ6S8J3 1075 aa11.45□□□□□ -0.58
CLTC-211ENST00000579815 ZNF687Q8N1G0 1237 aa11.45□□□□□ -0.58
CLTC-211ENST00000579815 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.45□□□□□ -0.58
CLTC-211ENST00000579815 EMILIN3Q9NT22 766 aa11.44□□□□□ -0.58
CLTC-211ENST00000579815 AXIN2Q9Y2T1 843 aa11.4□□□□□ -0.58
CLTC-211ENST00000579815 MMRN1Q13201 1228 aa11.39□□□□□ -0.59
CLTC-211ENST00000579815 ZCCHC6Q5VYS8 1495 aaKnown RBP11.38□□□□□ -0.59
CLTC-211ENST00000579815 TBC1D12O60347 775 aa11.34□□□□□ -0.59
CLTC-211ENST00000579815 CAMK2BQ13554 666 aa11.33□□□□□ -0.6
CLTC-211ENST00000579815 EVI5O60447 810 aa11.32□□□□□ -0.6
CLTC-211ENST00000579815 TSHZ2Q9NRE2 1034 aa11.32□□□□□ -0.6
CLTC-211ENST00000579815 LSM11P83369 360 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLTC-211ENST00000579815 DPYSL4O14531 572 aa11.3□□□□□ -0.6
CLTC-211ENST00000579815 PSEN2P49810 448 aa11.3□□□□□ -0.6
CLTC-211ENST00000579815 ANKRD13DQ6ZTN6 518 aa11.3□□□□□ -0.6
CLTC-211ENST00000579815 DMRTA1Q5VZB9 504 aa11.29□□□□□ -0.6
CLTC-211ENST00000579815 MAP3K9P80192 1104 aa11.28□□□□□ -0.6
CLTC-211ENST00000579815 ZNF454Q8N9F8 522 aa11.28□□□□□ -0.6
CLTC-211ENST00000579815 ANO8Q9HCE9 1232 aaPredicted RBP11.28□□□□□ -0.6
CLTC-211ENST00000579815 FOSBP53539 338 aa11.27□□□□□ -0.61
CLTC-211ENST00000579815 PBX2P40425 430 aa11.26□□□□□ -0.61
CLTC-211ENST00000579815 PPP4R3BQ5MIZ7 849 aa11.26□□□□□ -0.61
CLTC-211ENST00000579815 PSDA5PKW4 1024 aaPredicted RBP11.24□□□□□ -0.61
CLTC-211ENST00000579815 ARHGAP33O14559 1287 aa11.24□□□□□ -0.61
CLTC-211ENST00000579815 KCNK17Q96T54 332 aa11.23□□□□□ -0.61
CLTC-211ENST00000579815 ADAM33Q9BZ11 813 aa11.22□□□□□ -0.61
CLTC-211ENST00000579815 JPH4Q96JJ6 628 aa11.21□□□□□ -0.61
CLTC-211ENST00000579815 DCAF1Q9Y4B6 1507 aa11.2□□□□□ -0.62
CLTC-211ENST00000579815 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
CLTC-211ENST00000579815 E2F4Q16254 413 aa11.18□□□□□ -0.62
CLTC-211ENST00000579815 MYT1LQ9UL68 1186 aa11.18□□□□□ -0.62
CLTC-211ENST00000579815 ADGRD1Q6QNK2 874 aa11.17□□□□□ -0.62
CLTC-211ENST00000579815 BCL2L12Q9HB09 334 aa11.17□□□□□ -0.62
CLTC-211ENST00000579815 ZDHHC16Q969W1 377 aa11.16□□□□□ -0.62
CLTC-211ENST00000579815 DDX12PQ92771 950 aa11.15□□□□□ -0.62
CLTC-211ENST00000579815 RNF166Q96A37 237 aaPredicted RBP11.15□□□□□ -0.62
CLTC-211ENST00000579815 PLCB2Q00722 1185 aa11.13□□□□□ -0.63
CLTC-211ENST00000579815 PDIA6Q15084 440 aa11.13□□□□□ -0.63
CLTC-211ENST00000579815 WDR70Q9NW82 654 aa11.13□□□□□ -0.63
CLTC-211ENST00000579815 HRO43593 1189 aa11.12□□□□□ -0.63
CLTC-211ENST00000579815 COL9A1P20849 921 aa11.12□□□□□ -0.63
CLTC-211ENST00000579815 PRIM1P49642 420 aaKnown RBP11.12□□□□□ -0.63
CLTC-211ENST00000579815 VPS9D1Q9Y2B5 631 aa11.11□□□□□ -0.63
CLTC-211ENST00000579815 PHF14O94880 888 aa11.1□□□□□ -0.63
CLTC-211ENST00000579815 PTPREP23469 700 aa11.1□□□□□ -0.63
CLTC-211ENST00000579815 TYW1BQ6NUM6 668 aa11.1□□□□□ -0.63
CLTC-211ENST00000579815 TK2O00142 265 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms