RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 CDC42BPAQ5VT25 1732 aa25.91■■□□□ 1.74
RARA-209ENST00000579727 AKNAQ7Z591 1439 aa25.91■■□□□ 1.74
RARA-209ENST00000579727 ARHGAP5Q13017 1502 aa25.91■■□□□ 1.74
RARA-209ENST00000579727 FRMPD1Q5SYB0 1578 aa25.89■■□□□ 1.73
RARA-209ENST00000579727 PHLDB1Q86UU1 1377 aa25.88■■□□□ 1.73
RARA-209ENST00000579727 RAPGEF3O95398 923 aa25.86■■□□□ 1.73
RARA-209ENST00000579727 RICTORQ6R327 1708 aa25.85■■□□□ 1.73
RARA-209ENST00000579727 EFCAB2Q5VUJ9 269 aa25.82■■□□□ 1.72
RARA-209ENST00000579727 DENND4BO75064 1496 aaPredicted RBP25.82■■□□□ 1.72
RARA-209ENST00000579727 SUPT6HQ7KZ85 1726 aaKnown RBP25.81■■□□□ 1.72
RARA-209ENST00000579727 SCAPERQ9BY12 1400 aa25.8■■□□□ 1.72
RARA-209ENST00000579727 GPATCH8Q9UKJ3 1502 aaKnown RBP25.79■■□□□ 1.72
RARA-209ENST00000579727 LRRC9Q6ZRR7 1453 aa25.79■■□□□ 1.72
RARA-209ENST00000579727 ADAMTSL3P82987 1691 aa25.78■■□□□ 1.72
RARA-209ENST00000579727 CCNB3Q8WWL7 1395 aa25.78■■□□□ 1.72
RARA-209ENST00000579727 MAP3K1Q13233 1512 aa25.77■■□□□ 1.72
RARA-209ENST00000579727 ITSN2Q9NZM3 1697 aa25.75■■□□□ 1.71
RARA-209ENST00000579727 NCOA2Q15596 1464 aa25.75■■□□□ 1.71
RARA-209ENST00000579727 SAMD9LQ8IVG5 1584 aa25.74■■□□□ 1.71
RARA-209ENST00000579727 ABCC1P33527 1531 aa25.74■■□□□ 1.71
RARA-209ENST00000579727 POGZQ7Z3K3 1410 aa25.74■■□□□ 1.71
RARA-209ENST00000579727 KANK4Q5T7N3 995 aaPredicted RBP25.74■■□□□ 1.71
RARA-209ENST00000579727 ZNF777Q9ULD5 760 aaPredicted RBP25.73■■□□□ 1.71
RARA-209ENST00000579727 PTPRMP28827 1452 aa25.72■■□□□ 1.71
RARA-209ENST00000579727 ZMYM4Q5VZL5 1548 aa25.7■■□□□ 1.7
RARA-209ENST00000579727 ARHGEF12Q9NZN5 1544 aa25.7■■□□□ 1.7
RARA-209ENST00000579727 APLP2Q06481 763 aa25.7■■□□□ 1.7
RARA-209ENST00000579727 CFDP1Q9UEE9 299 aaPredicted RBP25.68■■□□□ 1.7
RARA-209ENST00000579727 ARHGEF40Q8TER5 1519 aa25.68■■□□□ 1.7
RARA-209ENST00000579727 SYCP2Q9BX26 1530 aa25.68■■□□□ 1.7
RARA-209ENST00000579727 ZFYVE16Q7Z3T8 1539 aa25.65■■□□□ 1.7
RARA-209ENST00000579727 BCORL1Q5H9F3 1711 aa25.65■■□□□ 1.7
RARA-209ENST00000579727 ZNF518AQ6AHZ1 1483 aa25.65■■□□□ 1.7
RARA-209ENST00000579727 YEATS2Q9ULM3 1422 aa25.64■■□□□ 1.7
RARA-209ENST00000579727 TRAPPC8Q9Y2L5 1435 aa25.64■■□□□ 1.7
RARA-209ENST00000579727 MADDQ8WXG6 1647 aa25.63■■□□□ 1.69
RARA-209ENST00000579727 AFAP1Q8N556 730 aa25.63■■□□□ 1.69
RARA-209ENST00000579727 KDM5CP41229 1560 aa25.63■■□□□ 1.69
RARA-209ENST00000579727 ZNF644Q9H582 1327 aaPredicted RBP25.61■■□□□ 1.69
RARA-209ENST00000579727 LMTK3Q96Q04 1460 aa25.6■■□□□ 1.69
RARA-209ENST00000579727 HNRNPMP52272 730 aaKnown RBP eCLIP25.59■■□□□ 1.69
RARA-209ENST00000579727 SIGLEC1Q9BZZ2 1709 aa25.58■■□□□ 1.69
RARA-209ENST00000579727 MYT1LQ9UL68 1186 aa25.57■■□□□ 1.68
RARA-209ENST00000579727 CAMSAP2Q08AD1 1489 aa25.57■■□□□ 1.68
RARA-209ENST00000579727 MAGI2Q86UL8 1455 aa25.57■■□□□ 1.68
RARA-209ENST00000579727 PLEKHH2Q8IVE3 1493 aa25.56■■□□□ 1.68
RARA-209ENST00000579727 ABCA6Q8N139 1617 aa25.55■■□□□ 1.68
RARA-209ENST00000579727 RIMS1Q86UR5 1692 aaKnown RBP25.55■■□□□ 1.68
RARA-209ENST00000579727 MYOM3Q5VTT5 1437 aa25.53■■□□□ 1.68
RARA-209ENST00000579727 KIAA1107Q9UPP5 1409 aa25.53■■□□□ 1.68
RARA-209ENST00000579727 DIP2CQ9Y2E4 1556 aa25.52■■□□□ 1.68
RARA-209ENST00000579727 KIDINS220Q9ULH0 1771 aa25.52■■□□□ 1.68
RARA-209ENST00000579727 ARID4BQ4LE39 1312 aaPredicted RBP25.51■■□□□ 1.67
RARA-209ENST00000579727 MLH3Q9UHC1 1453 aa25.5■■□□□ 1.67
RARA-209ENST00000579727 MBD5Q9P267 1494 aa25.48■■□□□ 1.67
RARA-209ENST00000579727 INO80Q9ULG1 1556 aaPredicted RBP25.48■■□□□ 1.67
RARA-209ENST00000579727 ATP10AO60312 1499 aa25.47■■□□□ 1.67
RARA-209ENST00000579727 C9orf84Q5VXU9 1444 aa25.46■■□□□ 1.67
RARA-209ENST00000579727 ATP7AQ04656 1500 aa25.46■■□□□ 1.67
RARA-209ENST00000579727 SPAG9O60271 1321 aaKnown RBP25.45■■□□□ 1.66
RARA-209ENST00000579727 PPARGC1BQ86YN6 1023 aaKnown RBP25.45■■□□□ 1.66
RARA-209ENST00000579727 MIA2Q96PC5 1412 aa25.43■■□□□ 1.66
RARA-209ENST00000579727 CCDC141Q6ZP82 1450 aa25.42■■□□□ 1.66
RARA-209ENST00000579727 PTPN23Q9H3S7 1636 aa25.42■■□□□ 1.66
RARA-209ENST00000579727 HSPA2P54652 639 aa25.41■■□□□ 1.66
RARA-209ENST00000579727 ARHGEF5Q12774 1597 aa25.4■■□□□ 1.66
RARA-209ENST00000579727 MLECQ14165 292 aa25.39■■□□□ 1.66
RARA-209ENST00000579727 FGD6Q6ZV73 1430 aa25.38■■□□□ 1.65
RARA-209ENST00000579727 REREQ9P2R6 1566 aa25.38■■□□□ 1.65
RARA-209ENST00000579727 ADGBQ8N7X0 1667 aa25.35■■□□□ 1.65
RARA-209ENST00000579727 FER1L4A9Z1Z3 1794 aa25.33■■□□□ 1.65
RARA-209ENST00000579727 CERKQ8TCT0 537 aa25.32■■□□□ 1.64
RARA-209ENST00000579727 TCOF1Q13428 1488 aaKnown RBP25.32■■□□□ 1.64
RARA-209ENST00000579727 CROCC2H7BZ55 1655 aa25.32■■□□□ 1.64
RARA-209ENST00000579727 ILDR2Q71H61 639 aa25.31■■□□□ 1.64
RARA-209ENST00000579727 PLPPR3Q6T4P5 718 aa25.3■■□□□ 1.64
RARA-209ENST00000579727 RTEL1-TNFRSF6BF6WH68 1400 aa25.29■■□□□ 1.64
RARA-209ENST00000579727 A2MP01023 1474 aa25.29■■□□□ 1.64
RARA-209ENST00000579727 PLXNC1O60486 1568 aa25.29■■□□□ 1.64
RARA-209ENST00000579727 AGLP35573 1532 aa25.28■■□□□ 1.64
RARA-209ENST00000579727 RSPH4AQ5TD94 716 aa25.28■■□□□ 1.64
RARA-209ENST00000579727 MAST1Q9Y2H9 1570 aa25.27■■□□□ 1.64
RARA-209ENST00000579727 DNMT1P26358 1616 aaKnown RBP25.27■■□□□ 1.64
RARA-209ENST00000579727 TSPY4P0CV99 314 aa25.26■■□□□ 1.63
RARA-209ENST00000579727 TSPY10P0CW01 314 aa25.26■■□□□ 1.63
RARA-209ENST00000579727 FAM50AQ14320 339 aaKnown RBP25.24■■□□□ 1.63
RARA-209ENST00000579727 ABCC5O15440 1437 aa25.23■■□□□ 1.63
RARA-209ENST00000579727 DAPK1P53355 1430 aa25.23■■□□□ 1.63
RARA-209ENST00000579727 DISP3Q9P2K9 1392 aa25.22■■□□□ 1.63
RARA-209ENST00000579727 SOCS7O14512 581 aa25.19■■□□□ 1.62
RARA-209ENST00000579727 SHANK2Q9UPX8 1470 aa25.19■■□□□ 1.62
RARA-209ENST00000579727 PREX1Q8TCU6 1659 aa25.18■■□□□ 1.62
RARA-209ENST00000579727 STRCQ7RTU9 1775 aa25.18■■□□□ 1.62
RARA-209ENST00000579727 DHX29Q7Z478 1369 aaKnown RBP25.17■■□□□ 1.62
RARA-209ENST00000579727 CHIC2Q9UKJ5 165 aa25.15■■□□□ 1.62
RARA-209ENST00000579727 GGT6Q6P531 493 aa25.13■■□□□ 1.61
RARA-209ENST00000579727 CLTCQ00610 1675 aaKnown RBP25.13■■□□□ 1.61
RARA-209ENST00000579727 C3P01024 1663 aa25.1■■□□□ 1.61
RARA-209ENST00000579727 SPATA31D1Q6ZQQ2 1576 aa25.1■■□□□ 1.61
RARA-209ENST00000579727 KIF15Q9NS87 1388 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms