RNA–Protein interactions for RNA: ENST00000579057.5

LINC00271-204, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-204ENST00000579057 PLCH2O75038 1416 aa15.38■□□□□ 0.05
LINC00271-204ENST00000579057 FMN1Q68DA7 1419 aa15.38■□□□□ 0.05
LINC00271-204ENST00000579057 YEATS2Q9ULM3 1422 aa15.38■□□□□ 0.05
LINC00271-204ENST00000579057 KIF14Q15058 1648 aa15.37■□□□□ 0.05
LINC00271-204ENST00000579057 UBTFP17480 764 aaKnown RBP15.37■□□□□ 0.05
LINC00271-204ENST00000579057 RIMS1Q86UR5 1692 aaKnown RBP15.37■□□□□ 0.05
LINC00271-204ENST00000579057 ZFYVE16Q7Z3T8 1539 aa15.36■□□□□ 0.05
LINC00271-204ENST00000579057 POGZQ7Z3K3 1410 aa15.35■□□□□ 0.05
LINC00271-204ENST00000579057 MYO5CQ9NQX4 1742 aa15.35■□□□□ 0.05
LINC00271-204ENST00000579057 ARID4BQ4LE39 1312 aaPredicted RBP15.35■□□□□ 0.05
LINC00271-204ENST00000579057 MAGI2Q86UL8 1455 aa15.34■□□□□ 0.05
LINC00271-204ENST00000579057 SCAPERQ9BY12 1400 aa15.34■□□□□ 0.05
LINC00271-204ENST00000579057 LMTK3Q96Q04 1460 aa15.33■□□□□ 0.05
LINC00271-204ENST00000579057 PCF11O94913 1555 aaKnown RBP15.33■□□□□ 0.05
LINC00271-204ENST00000579057 TROQ12816 1431 aaPredicted RBP15.31■□□□□ 0.04
LINC00271-204ENST00000579057 ATP1B4Q9UN42 357 aaPredicted RBP15.29■□□□□ 0.04
LINC00271-204ENST00000579057 FER1L4A9Z1Z3 1794 aa15.28■□□□□ 0.04
LINC00271-204ENST00000579057 CDC42BPBQ9Y5S2 1711 aa15.28■□□□□ 0.04
LINC00271-204ENST00000579057 KDM5CP41229 1560 aa15.28■□□□□ 0.04
LINC00271-204ENST00000579057 EFCAB2Q5VUJ9 269 aa15.27■□□□□ 0.04
LINC00271-204ENST00000579057 ATP10AO60312 1499 aa15.27■□□□□ 0.03
LINC00271-204ENST00000579057 ARHGEF12Q9NZN5 1544 aa15.26■□□□□ 0.03
LINC00271-204ENST00000579057 CDK11AQ9UQ88 783 aaPredicted RBP15.25■□□□□ 0.03
LINC00271-204ENST00000579057 ARHGAP5Q13017 1502 aa15.25■□□□□ 0.03
LINC00271-204ENST00000579057 C9orf84Q5VXU9 1444 aa15.25■□□□□ 0.03
LINC00271-204ENST00000579057 CASKIN1Q8WXD9 1431 aa15.25■□□□□ 0.03
LINC00271-204ENST00000579057 ZNF518AQ6AHZ1 1483 aa15.24■□□□□ 0.03
LINC00271-204ENST00000579057 PREX2Q70Z35 1606 aa15.23■□□□□ 0.03
LINC00271-204ENST00000579057 CLIP1P30622 1438 aa15.23■□□□□ 0.03
LINC00271-204ENST00000579057 MLECQ14165 292 aa15.22■□□□□ 0.03
LINC00271-204ENST00000579057 AFAP1Q8N556 730 aa15.22■□□□□ 0.03
LINC00271-204ENST00000579057 DIP2CQ9Y2E4 1556 aa15.22■□□□□ 0.03
LINC00271-204ENST00000579057 HSPA2P54652 639 aa15.21■□□□□ 0.03
LINC00271-204ENST00000579057 ABCA6Q8N139 1617 aa15.21■□□□□ 0.02
LINC00271-204ENST00000579057 CCDC18Q5T9S5 1454 aa15.2■□□□□ 0.02
LINC00271-204ENST00000579057 CDC42BPAQ5VT25 1732 aa15.2■□□□□ 0.02
LINC00271-204ENST00000579057 ABCC1P33527 1531 aa15.2■□□□□ 0.02
LINC00271-204ENST00000579057 REREQ9P2R6 1566 aa15.19■□□□□ 0.02
LINC00271-204ENST00000579057 ITSN2Q9NZM3 1697 aa15.19■□□□□ 0.02
LINC00271-204ENST00000579057 TRAPPC8Q9Y2L5 1435 aa15.18■□□□□ 0.02
LINC00271-204ENST00000579057 FBXO41Q8TF61 875 aa15.18■□□□□ 0.02
LINC00271-204ENST00000579057 FYCO1Q9BQS8 1478 aa15.18■□□□□ 0.02
LINC00271-204ENST00000579057 MLH3Q9UHC1 1453 aa15.18■□□□□ 0.02
LINC00271-204ENST00000579057 KIDINS220Q9ULH0 1771 aa15.16■□□□□ 0.02
LINC00271-204ENST00000579057 PREX1Q8TCU6 1659 aa15.16■□□□□ 0.02
LINC00271-204ENST00000579057 CEBPAP49715 358 aaPredicted RBP15.14■□□□□ 0.01
LINC00271-204ENST00000579057 AGLP35573 1532 aa15.13■□□□□ 0.01
LINC00271-204ENST00000579057 SAMD9LQ8IVG5 1584 aa15.13■□□□□ 0.01
LINC00271-204ENST00000579057 SETD1BQ9UPS6 1966 aaKnown RBP15.13■□□□□ 0.01
LINC00271-204ENST00000579057 C3P01024 1663 aa15.11■□□□□ 0.01
LINC00271-204ENST00000579057 GPATCH8Q9UKJ3 1502 aaKnown RBP15.11■□□□□ 0.01
LINC00271-204ENST00000579057 STRCQ7RTU9 1775 aa15.11■□□□□ 0.01
LINC00271-204ENST00000579057 SYCP2Q9BX26 1530 aa15.09■□□□□ 0.01
LINC00271-204ENST00000579057 MYT1LQ9UL68 1186 aa15.05■□□□□ -0
LINC00271-204ENST00000579057 INO80Q9ULG1 1556 aaPredicted RBP15.04■□□□□ -0
LINC00271-204ENST00000579057 UHRF1BP1Q6BDS2 1440 aa15.04■□□□□ -0
LINC00271-204ENST00000579057 PLXNC1O60486 1568 aa15.03■□□□□ -0
LINC00271-204ENST00000579057 KIAA1107Q9UPP5 1409 aa15.03■□□□□ -0
LINC00271-204ENST00000579057 ZNF777Q9ULD5 760 aaPredicted RBP15.03■□□□□ -0
LINC00271-204ENST00000579057 ATP7AQ04656 1500 aa15.02■□□□□ -0
LINC00271-204ENST00000579057 HNRNPMP52272 730 aaKnown RBP eCLIP15.02■□□□□ -0
LINC00271-204ENST00000579057 CERKQ8TCT0 537 aa15.02■□□□□ -0
LINC00271-204ENST00000579057 MROH2AA6NES4 1674 aa15.02□□□□□ -0.01
LINC00271-204ENST00000579057 TIAM1Q13009 1591 aa15.02□□□□□ -0.01
LINC00271-204ENST00000579057 SUPT6HQ7KZ85 1726 aaKnown RBP15.01□□□□□ -0.01
LINC00271-204ENST00000579057 SPAG9O60271 1321 aaKnown RBP15□□□□□ -0.01
LINC00271-204ENST00000579057 CNTLNQ9NXG0 1405 aa15□□□□□ -0.01
LINC00271-204ENST00000579057 CCNB3Q8WWL7 1395 aa14.99□□□□□ -0.01
LINC00271-204ENST00000579057 PLEKHH2Q8IVE3 1493 aa14.99□□□□□ -0.01
LINC00271-204ENST00000579057 MTUS2Q5JR59 1369 aa14.98□□□□□ -0.01
LINC00271-204ENST00000579057 MBD5Q9P267 1494 aa14.98□□□□□ -0.01
LINC00271-204ENST00000579057 CFDP1Q9UEE9 299 aaPredicted RBP14.98□□□□□ -0.01
LINC00271-204ENST00000579057 EHBP1L1Q8N3D4 1523 aa14.97□□□□□ -0.01
LINC00271-204ENST00000579057 ZNF644Q9H582 1327 aaPredicted RBP14.97□□□□□ -0.01
LINC00271-204ENST00000579057 A2MP01023 1474 aa14.96□□□□□ -0.01
LINC00271-204ENST00000579057 NPATQ14207 1427 aa14.96□□□□□ -0.01
LINC00271-204ENST00000579057 CEP162Q5TB80 1403 aa14.96□□□□□ -0.01
LINC00271-204ENST00000579057 CLTCQ00610 1675 aaKnown RBP14.96□□□□□ -0.01
LINC00271-204ENST00000579057 PTPRTO14522 1441 aa14.95□□□□□ -0.02
LINC00271-204ENST00000579057 NCOA1Q15788 1441 aa14.95□□□□□ -0.02
LINC00271-204ENST00000579057 ADGBQ8N7X0 1667 aa14.95□□□□□ -0.02
LINC00271-204ENST00000579057 ZMYM3Q14202 1370 aa14.95□□□□□ -0.02
LINC00271-204ENST00000579057 LTBP4Q8N2S1 1624 aa14.93□□□□□ -0.02
LINC00271-204ENST00000579057 ESF1Q9H501 851 aaKnown RBP14.93□□□□□ -0.02
LINC00271-204ENST00000579057 DMRT2Q9Y5R5 561 aa14.93□□□□□ -0.02
LINC00271-204ENST00000579057 ZNF142P52746 1687 aaPredicted RBP14.92□□□□□ -0.02
LINC00271-204ENST00000579057 CAMSAP1Q5T5Y3 1602 aa14.91□□□□□ -0.02
LINC00271-204ENST00000579057 MYO3AQ8NEV4 1616 aa14.91□□□□□ -0.02
LINC00271-204ENST00000579057 PTPRKQ15262 1439 aa14.91□□□□□ -0.02
LINC00271-204ENST00000579057 RTEL1-TNFRSF6BF6WH68 1400 aa14.9□□□□□ -0.02
LINC00271-204ENST00000579057 NCOA2Q15596 1464 aa14.89□□□□□ -0.03
LINC00271-204ENST00000579057 CEP170BQ9Y4F5 1589 aaPredicted RBP14.87□□□□□ -0.03
LINC00271-204ENST00000579057 CAMSAP2Q08AD1 1489 aa14.87□□□□□ -0.03
LINC00271-204ENST00000579057 DHX29Q7Z478 1369 aaKnown RBP14.86□□□□□ -0.03
LINC00271-204ENST00000579057 GGT6Q6P531 493 aa14.86□□□□□ -0.03
LINC00271-204ENST00000579057 CCDC141Q6ZP82 1450 aa14.86□□□□□ -0.03
LINC00271-204ENST00000579057 PLA2R1Q13018 1463 aa14.84□□□□□ -0.03
LINC00271-204ENST00000579057 TCOF1Q13428 1488 aaKnown RBP14.84□□□□□ -0.03
LINC00271-204ENST00000579057 ARHGEF5Q12774 1597 aa14.83□□□□□ -0.04
LINC00271-204ENST00000579057 NCKAP5LQ9HCH0 1330 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms