RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 PLCB2Q00722 1185 aa11□□□□□ -0.65
TRAPPC8-205ENST00000578658 C2orf72A6NCS6 295 aa10.98□□□□□ -0.65
TRAPPC8-205ENST00000578658 CADPS2Q86UW7 1296 aa10.98□□□□□ -0.65
TRAPPC8-205ENST00000578658 TMC2Q8TDI7 906 aa10.97□□□□□ -0.65
TRAPPC8-205ENST00000578658 CRISPLD2Q9H0B8 497 aa10.96□□□□□ -0.65
TRAPPC8-205ENST00000578658 NCKAP5LQ9HCH0 1330 aa10.95□□□□□ -0.66
TRAPPC8-205ENST00000578658 GPHNQ9NQX3 736 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC8-205ENST00000578658 PDE4AP27815 886 aa10.91□□□□□ -0.66
TRAPPC8-205ENST00000578658 SNPHO15079 494 aa10.9□□□□□ -0.66
TRAPPC8-205ENST00000578658 FOXK1P85037 733 aa10.9□□□□□ -0.66
TRAPPC8-205ENST00000578658 TSHZ2Q9NRE2 1034 aa10.9□□□□□ -0.66
TRAPPC8-205ENST00000578658 HOXB3P14651 431 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC8-205ENST00000578658 DSG2Q14126 1118 aa10.88□□□□□ -0.67
TRAPPC8-205ENST00000578658 MFSD10Q14728 455 aa10.87□□□□□ -0.67
TRAPPC8-205ENST00000578658 LARP6Q9BRS8 491 aaKnown RBP10.87□□□□□ -0.67
TRAPPC8-205ENST00000578658 PPP1R15BQ5SWA1 713 aa10.85□□□□□ -0.67
TRAPPC8-205ENST00000578658 PLPP6Q8IY26 295 aa10.85□□□□□ -0.67
TRAPPC8-205ENST00000578658 DOK7Q18PE1 504 aa10.84□□□□□ -0.67
TRAPPC8-205ENST00000578658 DDX27Q96GQ7 796 aaKnown RBP10.84□□□□□ -0.67
TRAPPC8-205ENST00000578658 LCE2DQ5TA82 110 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC8-205ENST00000578658 FAM163AQ96GL9 167 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC8-205ENST00000578658 ST18O60284 1047 aa10.81□□□□□ -0.68
TRAPPC8-205ENST00000578658 SLC34A2O95436 690 aa10.81□□□□□ -0.68
TRAPPC8-205ENST00000578658 HAP1P54257 671 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC8-205ENST00000578658 RIMBP2O15034 1052 aa10.79□□□□□ -0.68
TRAPPC8-205ENST00000578658 ZNF710Q8N1W2 664 aa10.78□□□□□ -0.68
TRAPPC8-205ENST00000578658 ZSWIM6Q9HCJ5 1215 aa10.78□□□□□ -0.68
TRAPPC8-205ENST00000578658 GPR153Q6NV75 609 aa10.75□□□□□ -0.69
TRAPPC8-205ENST00000578658 PTCD2Q8WV60 388 aaKnown RBP10.75□□□□□ -0.69
TRAPPC8-205ENST00000578658 HOXB1P14653 301 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC8-205ENST00000578658 CAMK2BQ13554 666 aa10.74□□□□□ -0.69
TRAPPC8-205ENST00000578658 PCDHGA4Q9Y5G9 962 aa10.73□□□□□ -0.69
TRAPPC8-205ENST00000578658 ARSIQ5FYB1 569 aa10.72□□□□□ -0.69
TRAPPC8-205ENST00000578658 OXER1Q8TDS5 423 aa10.72□□□□□ -0.69
TRAPPC8-205ENST00000578658 WDR70Q9NW82 654 aa10.72□□□□□ -0.69
TRAPPC8-205ENST00000578658 EMILIN3Q9NT22 766 aa10.71□□□□□ -0.69
TRAPPC8-205ENST00000578658 UPF1Q92900 1129 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRAPPC8-205ENST00000578658 KHSRPQ92945 711 aaKnown RBP eCLIP10.69□□□□□ -0.71e-6■■■□□ 17.3
TRAPPC8-205ENST00000578658 E2F4Q16254 413 aa10.68□□□□□ -0.7
TRAPPC8-205ENST00000578658 MARVELD3Q96A59 401 aa10.68□□□□□ -0.7
TRAPPC8-205ENST00000578658 TBC1D12O60347 775 aa10.67□□□□□ -0.7
TRAPPC8-205ENST00000578658 KDM2AQ9Y2K7 1162 aa10.67□□□□□ -0.7
TRAPPC8-205ENST00000578658 KDM4FA0A1W2PPD8 638 aa10.66□□□□□ -0.7
TRAPPC8-205ENST00000578658 NUDT7P0C024 238 aa10.65□□□□□ -0.7
TRAPPC8-205ENST00000578658 EMP3P54852 163 aa10.65□□□□□ -0.7
TRAPPC8-205ENST00000578658 VSIG10Q8N0Z9 540 aa10.65□□□□□ -0.7
TRAPPC8-205ENST00000578658 POTEGQ6S5H5 508 aa10.64□□□□□ -0.71
TRAPPC8-205ENST00000578658 POTEMA6NI47 508 aa10.63□□□□□ -0.71
TRAPPC8-205ENST00000578658 MAP3K9P80192 1104 aa10.62□□□□□ -0.71
TRAPPC8-205ENST00000578658 ARIH1Q9Y4X5 557 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC8-205ENST00000578658 DPYSL4O14531 572 aa10.61□□□□□ -0.71
TRAPPC8-205ENST00000578658 ZNF316A6NFI3 1004 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC8-205ENST00000578658 KCNV2Q8TDN2 545 aa10.59□□□□□ -0.71
TRAPPC8-205ENST00000578658 ERBB3P21860 1342 aa10.58□□□□□ -0.71
TRAPPC8-205ENST00000578658 FAM205CA6NFA0 338 aa10.58□□□□□ -0.72
TRAPPC8-205ENST00000578658 EVI5O60447 810 aa10.58□□□□□ -0.72
TRAPPC8-205ENST00000578658 LHX6Q9UPM6 363 aa10.58□□□□□ -0.72
TRAPPC8-205ENST00000578658 POTEB3A0JP26 581 aa10.57□□□□□ -0.72
TRAPPC8-205ENST00000578658 POTEBQ6S5H4 581 aa10.57□□□□□ -0.72
TRAPPC8-205ENST00000578658 HS3ST6Q96QI5 342 aa10.57□□□□□ -0.72
TRAPPC8-205ENST00000578658 ANO8Q9HCE9 1232 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC8-205ENST00000578658 VARS2Q5ST30 1063 aaKnown RBP10.56□□□□□ -0.72
TRAPPC8-205ENST00000578658 P3H3Q8IVL6 736 aa10.56□□□□□ -0.72
TRAPPC8-205ENST00000578658 PDIA6Q15084 440 aa10.55□□□□□ -0.72
TRAPPC8-205ENST00000578658 ARHGEF1Q92888 912 aaKnown RBP10.54□□□□□ -0.72
TRAPPC8-205ENST00000578658 PSDA5PKW4 1024 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC8-205ENST00000578658 SPDYE16A6NNV3 312 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC8-205ENST00000578658 SLC24A1O60721 1099 aa10.48□□□□□ -0.73
TRAPPC8-205ENST00000578658 PTGER2P43116 358 aa10.48□□□□□ -0.73
TRAPPC8-205ENST00000578658 FOSBP53539 338 aa10.48□□□□□ -0.73
TRAPPC8-205ENST00000578658 ZNF687Q8N1G0 1237 aa10.48□□□□□ -0.73
TRAPPC8-205ENST00000578658 JPH4Q96JJ6 628 aa10.48□□□□□ -0.73
TRAPPC8-205ENST00000578658 CDAN1Q8IWY9 1227 aa10.47□□□□□ -0.73
TRAPPC8-205ENST00000578658 PPP4R3BQ5MIZ7 849 aa10.46□□□□□ -0.73
TRAPPC8-205ENST00000578658 ZNF454Q8N9F8 522 aa10.46□□□□□ -0.73
TRAPPC8-205ENST00000578658 PCDH10Q9P2E7 1040 aa10.45□□□□□ -0.74
TRAPPC8-205ENST00000578658 PCDHGA10Q9Y5H3 936 aa10.44□□□□□ -0.74
TRAPPC8-205ENST00000578658 PHF14O94880 888 aa10.43□□□□□ -0.74
TRAPPC8-205ENST00000578658 DDX12PQ92771 950 aa10.43□□□□□ -0.74
TRAPPC8-205ENST00000578658 POTEEQ6S8J3 1075 aa10.41□□□□□ -0.74
TRAPPC8-205ENST00000578658 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
TRAPPC8-205ENST00000578658 KRTAP3-3Q9BYR6 98 aa10.41□□□□□ -0.74
TRAPPC8-205ENST00000578658 KRTAP3-2Q9BYR7 98 aa10.41□□□□□ -0.74
TRAPPC8-205ENST00000578658 PBX2P40425 430 aa10.4□□□□□ -0.74
TRAPPC8-205ENST00000578658 TYW1BQ6NUM6 668 aa10.4□□□□□ -0.74
TRAPPC8-205ENST00000578658 EPAS1Q99814 870 aa10.4□□□□□ -0.74
TRAPPC8-205ENST00000578658 FBXW7Q969H0 707 aa10.39□□□□□ -0.75
TRAPPC8-205ENST00000578658 BCL2L12Q9HB09 334 aa10.39□□□□□ -0.75
TRAPPC8-205ENST00000578658 GRXCR2A6NFK2 248 aa10.38□□□□□ -0.75
TRAPPC8-205ENST00000578658 SEMA3EO15041 775 aa10.38□□□□□ -0.75
TRAPPC8-205ENST00000578658 NBR1Q14596 966 aa10.38□□□□□ -0.75
TRAPPC8-205ENST00000578658 ADAM33Q9BZ11 813 aa10.38□□□□□ -0.75
TRAPPC8-205ENST00000578658 ARHGAP33O14559 1287 aa10.37□□□□□ -0.75
TRAPPC8-205ENST00000578658 MLLT3P42568 568 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC8-205ENST00000578658 AXIN2Q9Y2T1 843 aa10.36□□□□□ -0.75
TRAPPC8-205ENST00000578658 OSBPP22059 807 aa10.35□□□□□ -0.75
TRAPPC8-205ENST00000578658 PRIM1P49642 420 aaKnown RBP10.34□□□□□ -0.75
TRAPPC8-205ENST00000578658 EN1Q05925 392 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC8-205ENST00000578658 KCNK17Q96T54 332 aa10.34□□□□□ -0.75
TRAPPC8-205ENST00000578658 TESPA1A2RU30 521 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms