RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.47■■□□□ 1.67
SREBF1-218ENST00000578469 PTPRMP28827 1452 aa25.46■■□□□ 1.67
SREBF1-218ENST00000578469 ADAMTSL3P82987 1691 aa25.45■■□□□ 1.67
SREBF1-218ENST00000578469 NCOA2Q15596 1464 aa25.45■■□□□ 1.66
SREBF1-218ENST00000578469 RAPGEF3O95398 923 aa25.42■■□□□ 1.66
SREBF1-218ENST00000578469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.4■■□□□ 1.661e-8■■□□□ 14.4
SREBF1-218ENST00000578469 ARID4BQ4LE39 1312 aaPredicted RBP25.39■■□□□ 1.66
SREBF1-218ENST00000578469 CCER1Q8TC90 406 aaPredicted RBP25.39■■□□□ 1.66
SREBF1-218ENST00000578469 BCORL1Q5H9F3 1711 aa25.39■■□□□ 1.65
SREBF1-218ENST00000578469 FRMPD1Q5SYB0 1578 aa25.39■■□□□ 1.65
SREBF1-218ENST00000578469 FAM50AQ14320 339 aaKnown RBP25.38■■□□□ 1.65
SREBF1-218ENST00000578469 MYOM3Q5VTT5 1437 aa25.37■■□□□ 1.65
SREBF1-218ENST00000578469 FBXO41Q8TF61 875 aa25.37■■□□□ 1.65
SREBF1-218ENST00000578469 FGD6Q6ZV73 1430 aa25.37■■□□□ 1.65
SREBF1-218ENST00000578469 MADDQ8WXG6 1647 aa25.35■■□□□ 1.65
SREBF1-218ENST00000578469 ARHGEF40Q8TER5 1519 aa25.35■■□□□ 1.65
SREBF1-218ENST00000578469 CFAP74Q9C0B2 1584 aa25.34■■□□□ 1.65
SREBF1-218ENST00000578469 TROQ12816 1431 aaPredicted RBP25.32■■□□□ 1.64
SREBF1-218ENST00000578469 DENND4BO75064 1496 aaPredicted RBP25.32■■□□□ 1.64
SREBF1-218ENST00000578469 ITGAEP38570 1179 aa25.31■■□□□ 1.64
SREBF1-218ENST00000578469 PLEKHD1A6NEE1 506 aa25.3■■□□□ 1.64
SREBF1-218ENST00000578469 FANCAO15360 1455 aa25.28■■□□□ 1.64
SREBF1-218ENST00000578469 RICTORQ6R327 1708 aa25.26■■□□□ 1.63
SREBF1-218ENST00000578469 AKNAQ7Z591 1439 aa25.26■■□□□ 1.63
SREBF1-218ENST00000578469 MIA2Q96PC5 1412 aa25.26■■□□□ 1.63
SREBF1-218ENST00000578469 RIMS1Q86UR5 1692 aaKnown RBP25.26■■□□□ 1.63
SREBF1-218ENST00000578469 POGZQ7Z3K3 1410 aa25.25■■□□□ 1.63
SREBF1-218ENST00000578469 LMTK3Q96Q04 1460 aa25.25■■□□□ 1.63
SREBF1-218ENST00000578469 PTPN23Q9H3S7 1636 aa25.22■■□□□ 1.63
SREBF1-218ENST00000578469 ZMYM4Q5VZL5 1548 aa25.22■■□□□ 1.63
SREBF1-218ENST00000578469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.22■■□□□ 1.63
SREBF1-218ENST00000578469 TCOF1Q13428 1488 aaKnown RBP25.2■■□□□ 1.62
SREBF1-218ENST00000578469 TTC37Q6PGP7 1564 aa25.19■■□□□ 1.62
SREBF1-218ENST00000578469 ZFYVE16Q7Z3T8 1539 aa25.19■■□□□ 1.62
SREBF1-218ENST00000578469 MAGI2Q86UL8 1455 aa25.16■■□□□ 1.62
SREBF1-218ENST00000578469 KIF14Q15058 1648 aa25.15■■□□□ 1.62
SREBF1-218ENST00000578469 SETD5Q9C0A6 1442 aa25.13■■□□□ 1.61
SREBF1-218ENST00000578469 ITSN2Q9NZM3 1697 aa25.12■■□□□ 1.61
SREBF1-218ENST00000578469 YEATS2Q9ULM3 1422 aa25.11■■□□□ 1.61
SREBF1-218ENST00000578469 PLPPR3Q6T4P5 718 aa25.1■■□□□ 1.61
SREBF1-218ENST00000578469 FER1L4A9Z1Z3 1794 aa25.08■■□□□ 1.61
SREBF1-218ENST00000578469 GPATCH8Q9UKJ3 1502 aaKnown RBP25.07■■□□□ 1.6
SREBF1-218ENST00000578469 RAB3GAP2Q9H2M9 1393 aa25.07■■□□□ 1.6
SREBF1-218ENST00000578469 CFDP1Q9UEE9 299 aaPredicted RBP25.07■■□□□ 1.6
SREBF1-218ENST00000578469 SCAPERQ9BY12 1400 aa25.06■■□□□ 1.6
SREBF1-218ENST00000578469 HSPA2P54652 639 aa25.06■■□□□ 1.6
SREBF1-218ENST00000578469 PLCH2O75038 1416 aa25.05■■□□□ 1.6
SREBF1-218ENST00000578469 SIGLEC1Q9BZZ2 1709 aa25.04■■□□□ 1.6
SREBF1-218ENST00000578469 MLECQ14165 292 aa25.04■■□□□ 1.6
SREBF1-218ENST00000578469 CLSPNQ9HAW4 1339 aa25.04■■□□□ 1.6
SREBF1-218ENST00000578469 DHX57Q6P158 1386 aaKnown RBP25.02■■□□□ 1.6
SREBF1-218ENST00000578469 PTPRKQ15262 1439 aa25.02■■□□□ 1.6
SREBF1-218ENST00000578469 MYO5CQ9NQX4 1742 aa25.01■■□□□ 1.59
SREBF1-218ENST00000578469 C9orf84Q5VXU9 1444 aa25.01■■□□□ 1.59
SREBF1-218ENST00000578469 HFM1A2PYH4 1435 aa24.99■■□□□ 1.59
SREBF1-218ENST00000578469 ATP10AO60312 1499 aa24.99■■□□□ 1.59
SREBF1-218ENST00000578469 EFCAB2Q5VUJ9 269 aa24.98■■□□□ 1.59
SREBF1-218ENST00000578469 ARHGEF12Q9NZN5 1544 aa24.97■■□□□ 1.59
SREBF1-218ENST00000578469 CAMSAP2Q08AD1 1489 aa24.96■■□□□ 1.59
SREBF1-218ENST00000578469 DAPK1P53355 1430 aa24.95■■□□□ 1.59
SREBF1-218ENST00000578469 CDC42BPAQ5VT25 1732 aa24.95■■□□□ 1.59
SREBF1-218ENST00000578469 ZNF518AQ6AHZ1 1483 aa24.95■■□□□ 1.58
SREBF1-218ENST00000578469 PREX1Q8TCU6 1659 aa24.94■■□□□ 1.58
SREBF1-218ENST00000578469 DNMT1P26358 1616 aaKnown RBP24.94■■□□□ 1.58
SREBF1-218ENST00000578469 ZNF644Q9H582 1327 aaPredicted RBP24.94■■□□□ 1.58
SREBF1-218ENST00000578469 ZNF777Q9ULD5 760 aaPredicted RBP24.94■■□□□ 1.58
SREBF1-218ENST00000578469 CERKQ8TCT0 537 aa24.92■■□□□ 1.58
SREBF1-218ENST00000578469 ABCC5O15440 1437 aa24.92■■□□□ 1.58
SREBF1-218ENST00000578469 NAIPQ13075 1403 aa24.92■■□□□ 1.58
SREBF1-218ENST00000578469 ROCK1Q13464 1354 aa24.91■■□□□ 1.58
SREBF1-218ENST00000578469 ARHGAP5Q13017 1502 aa24.91■■□□□ 1.58
SREBF1-218ENST00000578469 CHIC2Q9UKJ5 165 aa24.9■■□□□ 1.58
SREBF1-218ENST00000578469 PREX2Q70Z35 1606 aa24.88■■□□□ 1.57
SREBF1-218ENST00000578469 ACIN1Q9UKV3 1341 aaKnown RBP24.87■■□□□ 1.57
SREBF1-218ENST00000578469 MYT1LQ9UL68 1186 aa24.87■■□□□ 1.57
SREBF1-218ENST00000578469 KDM5CP41229 1560 aa24.87■■□□□ 1.57
SREBF1-218ENST00000578469 RRP7BPQ9NSQ0 103 aa24.86■■□□□ 1.57
SREBF1-218ENST00000578469 GCC2Q8IWJ2 1684 aa24.85■■□□□ 1.57
SREBF1-218ENST00000578469 UHRF1BP1Q6BDS2 1440 aa24.85■■□□□ 1.57
SREBF1-218ENST00000578469 DMRT2Q9Y5R5 561 aa24.84■■□□□ 1.57
SREBF1-218ENST00000578469 RSPH4AQ5TD94 716 aa24.81■■□□□ 1.56
SREBF1-218ENST00000578469 CDC42BPBQ9Y5S2 1711 aa24.81■■□□□ 1.56
SREBF1-218ENST00000578469 REREQ9P2R6 1566 aa24.8■■□□□ 1.56
SREBF1-218ENST00000578469 DIP2CQ9Y2E4 1556 aa24.8■■□□□ 1.56
SREBF1-218ENST00000578469 CEBPAP49715 358 aaPredicted RBP24.8■■□□□ 1.56
SREBF1-218ENST00000578469 AFAP1Q8N556 730 aa24.79■■□□□ 1.56
SREBF1-218ENST00000578469 PLEKHH2Q8IVE3 1493 aa24.78■■□□□ 1.56
SREBF1-218ENST00000578469 ARHGEF5Q12774 1597 aa24.78■■□□□ 1.56
SREBF1-218ENST00000578469 CROCC2H7BZ55 1655 aa24.78■■□□□ 1.56
SREBF1-218ENST00000578469 SHANK2Q9UPX8 1470 aa24.77■■□□□ 1.56
SREBF1-218ENST00000578469 SETD1BQ9UPS6 1966 aaKnown RBP24.77■■□□□ 1.56
SREBF1-218ENST00000578469 TSPY4P0CV99 314 aa24.77■■□□□ 1.56
SREBF1-218ENST00000578469 TSPY10P0CW01 314 aa24.77■■□□□ 1.56
SREBF1-218ENST00000578469 ESF1Q9H501 851 aaKnown RBP24.77■■□□□ 1.56
SREBF1-218ENST00000578469 ADGBQ8N7X0 1667 aa24.77■■□□□ 1.56
SREBF1-218ENST00000578469 ADGRL2O95490 1459 aa24.77■■□□□ 1.56
SREBF1-218ENST00000578469 ANKRD30AQ9BXX3 1397 aa24.76■■□□□ 1.55
SREBF1-218ENST00000578469 MLH3Q9UHC1 1453 aa24.76■■□□□ 1.55
SREBF1-218ENST00000578469 SAMD9LQ8IVG5 1584 aa24.76■■□□□ 1.55
SREBF1-218ENST00000578469 ABCA6Q8N139 1617 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms