RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 KCNH8Q96L42 1107 aa20.38■□□□□ 0.85
SRSF1-202ENST00000578430 TCOF1Q13428 1488 aaKnown RBP20.37■□□□□ 0.85
SRSF1-202ENST00000578430 PTPN23Q9H3S7 1636 aa20.36■□□□□ 0.85
SRSF1-202ENST00000578430 CDC42BPAQ5VT25 1732 aa20.36■□□□□ 0.85
SRSF1-202ENST00000578430 TTC37Q6PGP7 1564 aa20.35■□□□□ 0.85
SRSF1-202ENST00000578430 CFDP1Q9UEE9 299 aaPredicted RBP20.35■□□□□ 0.85
SRSF1-202ENST00000578430 TSPOAP1O95153 1857 aa20.35■□□□□ 0.85
SRSF1-202ENST00000578430 ABCA9Q8IUA7 1624 aa20.35■□□□□ 0.85
SRSF1-202ENST00000578430 PPP6R1Q9UPN7 881 aa20.34■□□□□ 0.85
SRSF1-202ENST00000578430 PREX2Q70Z35 1606 aa20.34■□□□□ 0.85
SRSF1-202ENST00000578430 ARAP3Q8WWN8 1544 aa20.33■□□□□ 0.85
SRSF1-202ENST00000578430 FAM50AQ14320 339 aaKnown RBP20.33■□□□□ 0.85
SRSF1-202ENST00000578430 MYO5CQ9NQX4 1742 aa20.33■□□□□ 0.84
SRSF1-202ENST00000578430 PLCH2O75038 1416 aa20.31■□□□□ 0.84
SRSF1-202ENST00000578430 KDM6BO15054 1643 aa20.28■□□□□ 0.84
SRSF1-202ENST00000578430 CDC42BPBQ9Y5S2 1711 aa20.28■□□□□ 0.84
SRSF1-202ENST00000578430 GLI2P10070 1586 aa20.27■□□□□ 0.84
SRSF1-202ENST00000578430 ADRA2BP18089 450 aa20.27■□□□□ 0.84
SRSF1-202ENST00000578430 ARHGAP5Q13017 1502 aa20.27■□□□□ 0.83
SRSF1-202ENST00000578430 CAMSAP2Q08AD1 1489 aa20.26■□□□□ 0.83
SRSF1-202ENST00000578430 EFCAB2Q5VUJ9 269 aa20.26■□□□□ 0.83
SRSF1-202ENST00000578430 PLEKHH2Q8IVE3 1493 aa20.25■□□□□ 0.83
SRSF1-202ENST00000578430 POTEDQ86YR6 584 aa20.24■□□□□ 0.83
SRSF1-202ENST00000578430 CD109Q6YHK3 1445 aa20.22■□□□□ 0.83
SRSF1-202ENST00000578430 ZNF777Q9ULD5 760 aaPredicted RBP20.22■□□□□ 0.83
SRSF1-202ENST00000578430 KIAA1107Q9UPP5 1409 aa20.21■□□□□ 0.83
SRSF1-202ENST00000578430 RSPH4AQ5TD94 716 aa20.21■□□□□ 0.83
SRSF1-202ENST00000578430 ZNF644Q9H582 1327 aaPredicted RBP20.21■□□□□ 0.83
SRSF1-202ENST00000578430 KDM4FA0A1W2PPD8 638 aa20.2■□□□□ 0.82
SRSF1-202ENST00000578430 SAMD9LQ8IVG5 1584 aa20.2■□□□□ 0.82
SRSF1-202ENST00000578430 DNMT1P26358 1616 aaKnown RBP20.2■□□□□ 0.82
SRSF1-202ENST00000578430 ARHGEF5Q12774 1597 aa20.18■□□□□ 0.82
SRSF1-202ENST00000578430 CFAP74Q9C0B2 1584 aa20.18■□□□□ 0.82
SRSF1-202ENST00000578430 MAP3K4Q9Y6R4 1608 aa20.18■□□□□ 0.82
SRSF1-202ENST00000578430 ITGAEP38570 1179 aa20.18■□□□□ 0.82
SRSF1-202ENST00000578430 DAPK1P53355 1430 aa20.18■□□□□ 0.82
SRSF1-202ENST00000578430 FANCAO15360 1455 aa20.18■□□□□ 0.82
SRSF1-202ENST00000578430 ABCC5O15440 1437 aa20.16■□□□□ 0.82
SRSF1-202ENST00000578430 MBD5Q9P267 1494 aa20.15■□□□□ 0.82
SRSF1-202ENST00000578430 PPRC1Q5VV67 1664 aaKnown RBP20.14■□□□□ 0.81
SRSF1-202ENST00000578430 ABCC1P33527 1531 aa20.13■□□□□ 0.81
SRSF1-202ENST00000578430 SHANK2Q9UPX8 1470 aa20.13■□□□□ 0.81
SRSF1-202ENST00000578430 PTPRKQ15262 1439 aa20.13■□□□□ 0.81
SRSF1-202ENST00000578430 AKNAQ7Z591 1439 aa20.13■□□□□ 0.81
SRSF1-202ENST00000578430 CCDC141Q6ZP82 1450 aa20.12■□□□□ 0.81
SRSF1-202ENST00000578430 NEO1Q92859 1461 aa20.12■□□□□ 0.81
SRSF1-202ENST00000578430 ROCK1Q13464 1354 aa20.12■□□□□ 0.81
SRSF1-202ENST00000578430 SYCP2Q9BX26 1530 aa20.12■□□□□ 0.81
SRSF1-202ENST00000578430 CROCC2H7BZ55 1655 aa20.11■□□□□ 0.81
SRSF1-202ENST00000578430 TSPY4P0CV99 314 aa20.1■□□□□ 0.81
SRSF1-202ENST00000578430 TSPY10P0CW01 314 aa20.1■□□□□ 0.81
SRSF1-202ENST00000578430 HNRNPMP52272 730 aaKnown RBP eCLIP20.1■□□□□ 0.81
SRSF1-202ENST00000578430 ADGRL1O94910 1474 aa20.08■□□□□ 0.81
SRSF1-202ENST00000578430 ADGRL2O95490 1459 aa20.08■□□□□ 0.81
SRSF1-202ENST00000578430 HFM1A2PYH4 1435 aa20.08■□□□□ 0.8
SRSF1-202ENST00000578430 TEX14Q8IWB6 1497 aa20.07■□□□□ 0.8
SRSF1-202ENST00000578430 SETD5Q9C0A6 1442 aa20.07■□□□□ 0.8
SRSF1-202ENST00000578430 ARHGEF12Q9NZN5 1544 aa20.07■□□□□ 0.8
SRSF1-202ENST00000578430 HRCP23327 699 aa20.06■□□□□ 0.8
SRSF1-202ENST00000578430 MAST1Q9Y2H9 1570 aa20.06■□□□□ 0.8
SRSF1-202ENST00000578430 ADGBQ8N7X0 1667 aa20.06■□□□□ 0.8
SRSF1-202ENST00000578430 C9orf84Q5VXU9 1444 aa20.05■□□□□ 0.8
SRSF1-202ENST00000578430 SCAPERQ9BY12 1400 aa20.05■□□□□ 0.8
SRSF1-202ENST00000578430 ANKRD30AQ9BXX3 1397 aa20.05■□□□□ 0.8
SRSF1-202ENST00000578430 ACIN1Q9UKV3 1341 aaKnown RBP20.03■□□□□ 0.8
SRSF1-202ENST00000578430 CHIC2Q9UKJ5 165 aa20.03■□□□□ 0.8
SRSF1-202ENST00000578430 NAIPQ13075 1403 aa20.02■□□□□ 0.8
SRSF1-202ENST00000578430 NCOA1Q15788 1441 aa20.02■□□□□ 0.8
SRSF1-202ENST00000578430 TRAPPC8Q9Y2L5 1435 aa20.02■□□□□ 0.79
SRSF1-202ENST00000578430 GCC2Q8IWJ2 1684 aa20.01■□□□□ 0.79
SRSF1-202ENST00000578430 RTEL1-TNFRSF6BF6WH68 1400 aa20.01■□□□□ 0.79
SRSF1-202ENST00000578430 ZNF518AQ6AHZ1 1483 aa20■□□□□ 0.79
SRSF1-202ENST00000578430 COL17A1Q9UMD9 1497 aaPredicted RBP19.99■□□□□ 0.79
SRSF1-202ENST00000578430 RAB3GAP2Q9H2M9 1393 aa19.99■□□□□ 0.79
SRSF1-202ENST00000578430 RRP7BPQ9NSQ0 103 aa19.98■□□□□ 0.79
SRSF1-202ENST00000578430 POGZQ7Z3K3 1410 aa19.98■□□□□ 0.79
SRSF1-202ENST00000578430 SPAG9O60271 1321 aaKnown RBP19.98■□□□□ 0.79
SRSF1-202ENST00000578430 DENND4BO75064 1496 aaPredicted RBP19.98■□□□□ 0.79
SRSF1-202ENST00000578430 PLXNC1O60486 1568 aa19.97■□□□□ 0.79
SRSF1-202ENST00000578430 AFAP1Q8N556 730 aa19.95■□□□□ 0.78
SRSF1-202ENST00000578430 KDM5CP41229 1560 aa19.95■□□□□ 0.78
SRSF1-202ENST00000578430 KIF15Q9NS87 1388 aa19.94■□□□□ 0.78
SRSF1-202ENST00000578430 ZFYVE16Q7Z3T8 1539 aa19.92■□□□□ 0.78
SRSF1-202ENST00000578430 INO80Q9ULG1 1556 aaPredicted RBP19.92■□□□□ 0.78
SRSF1-202ENST00000578430 MLH3Q9UHC1 1453 aa19.92■□□□□ 0.78
SRSF1-202ENST00000578430 ATP7AQ04656 1500 aa19.91■□□□□ 0.78
SRSF1-202ENST00000578430 RICTORQ6R327 1708 aa19.89■□□□□ 0.77
SRSF1-202ENST00000578430 DUOX2Q9NRD8 1548 aa19.89■□□□□ 0.77
SRSF1-202ENST00000578430 ANKRD50Q9ULJ7 1429 aa19.89■□□□□ 0.77
SRSF1-202ENST00000578430 HECW2Q9P2P5 1572 aa19.87■□□□□ 0.77
SRSF1-202ENST00000578430 ZMYM4Q5VZL5 1548 aa19.86■□□□□ 0.77
SRSF1-202ENST00000578430 ERBINQ96RT1 1412 aa19.85■□□□□ 0.77
SRSF1-202ENST00000578430 KIDINS220Q9ULH0 1771 aa19.85■□□□□ 0.77
SRSF1-202ENST00000578430 MAGI2Q86UL8 1455 aa19.85■□□□□ 0.77
SRSF1-202ENST00000578430 RAPGEF3O95398 923 aa19.84■□□□□ 0.77
SRSF1-202ENST00000578430 CCER1Q8TC90 406 aaPredicted RBP19.84■□□□□ 0.77
SRSF1-202ENST00000578430 MYT1LQ9UL68 1186 aa19.84■□□□□ 0.77
SRSF1-202ENST00000578430 FRMPD1Q5SYB0 1578 aa19.83■□□□□ 0.77
SRSF1-202ENST00000578430 ILDR1Q86SU0 546 aaPredicted RBP19.83■□□□□ 0.77
SRSF1-202ENST00000578430 DHX57Q6P158 1386 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms