RNA–Protein interactions for RNA: ENST00000578412.1

TOP2A-204, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-204ENST00000578412 NKX1-1Q15270 411 aaPredicted RBP10.3□□□□□ -0.76
TOP2A-204ENST00000578412 SPNS2Q8IVW8 549 aa10.3□□□□□ -0.76
TOP2A-204ENST00000578412 HOXB3P14651 431 aaPredicted RBP10.28□□□□□ -0.76
TOP2A-204ENST00000578412 MMRN1Q13201 1228 aa10.27□□□□□ -0.77
TOP2A-204ENST00000578412 ZNF710Q8N1W2 664 aa10.27□□□□□ -0.77
TOP2A-204ENST00000578412 DOK7Q18PE1 504 aa10.25□□□□□ -0.77
TOP2A-204ENST00000578412 RTN4Q9NQC3 1192 aaKnown RBP10.25□□□□□ -0.77
TOP2A-204ENST00000578412 AMER1Q5JTC6 1135 aaPredicted RBP10.24□□□□□ -0.77
TOP2A-204ENST00000578412 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
TOP2A-204ENST00000578412 KRTAP3-2Q9BYR7 98 aa10.24□□□□□ -0.77
TOP2A-204ENST00000578412 C2orf72A6NCS6 295 aa10.23□□□□□ -0.77
TOP2A-204ENST00000578412 EMP3P54852 163 aa10.23□□□□□ -0.77
TOP2A-204ENST00000578412 DNAJC5Q9H3Z4 198 aa10.22□□□□□ -0.77
TOP2A-204ENST00000578412 TMC2Q8TDI7 906 aa10.21□□□□□ -0.77
TOP2A-204ENST00000578412 HS3ST6Q96QI5 342 aa10.21□□□□□ -0.77
TOP2A-204ENST00000578412 RIMBP2O15034 1052 aa10.19□□□□□ -0.78
TOP2A-204ENST00000578412 RYDENQ9NUL5 291 aaKnown RBP10.19□□□□□ -0.78
TOP2A-204ENST00000578412 FAM205CA6NFA0 338 aa10.18□□□□□ -0.78
TOP2A-204ENST00000578412 KIF3CO14782 793 aa10.18□□□□□ -0.78
TOP2A-204ENST00000578412 HOXB1P14653 301 aaPredicted RBP10.16□□□□□ -0.78
TOP2A-204ENST00000578412 GTPBP6O43824 516 aaPredicted RBP10.15□□□□□ -0.78
TOP2A-204ENST00000578412 ARSIQ5FYB1 569 aa10.13□□□□□ -0.79
TOP2A-204ENST00000578412 KHSRPQ92945 711 aaKnown RBP eCLIP10.12□□□□□ -0.791e-6■■■□□ 16
TOP2A-204ENST00000578412 ERBB3P21860 1342 aa10.11□□□□□ -0.79
TOP2A-204ENST00000578412 GPR153Q6NV75 609 aa10.11□□□□□ -0.79
TOP2A-204ENST00000578412 ZSWIM6Q9HCJ5 1215 aa10.11□□□□□ -0.79
TOP2A-204ENST00000578412 GPHNQ9NQX3 736 aaPredicted RBP10.09□□□□□ -0.79
TOP2A-204ENST00000578412 DSG2Q14126 1118 aa10.07□□□□□ -0.8
TOP2A-204ENST00000578412 PLPP6Q8IY26 295 aa10.07□□□□□ -0.8
TOP2A-204ENST00000578412 VARS2Q5ST30 1063 aaKnown RBP10.06□□□□□ -0.8
TOP2A-204ENST00000578412 BBXQ8WY36 941 aaPredicted RBP10.06□□□□□ -0.8
TOP2A-204ENST00000578412 FOXK1P85037 733 aa10.05□□□□□ -0.8
TOP2A-204ENST00000578412 NUDT7P0C024 238 aa10.04□□□□□ -0.8
TOP2A-204ENST00000578412 PCDHGA4Q9Y5G9 962 aa10.04□□□□□ -0.8
TOP2A-204ENST00000578412 SLC34A2O95436 690 aa10.02□□□□□ -0.81
TOP2A-204ENST00000578412 NCKAP5LQ9HCH0 1330 aa10.02□□□□□ -0.81
TOP2A-204ENST00000578412 PDE4AP27815 886 aa10.01□□□□□ -0.81
TOP2A-204ENST00000578412 CRISPLD2Q9H0B8 497 aa10.01□□□□□ -0.81
TOP2A-204ENST00000578412 LARP6Q9BRS8 491 aaKnown RBP10□□□□□ -0.81
TOP2A-204ENST00000578412 ZBTB4Q9P1Z0 1013 aaPredicted RBP10□□□□□ -0.81
TOP2A-204ENST00000578412 ZNF316A6NFI3 1004 aaPredicted RBP9.99□□□□□ -0.81
TOP2A-204ENST00000578412 PPP1R15BQ5SWA1 713 aa9.98□□□□□ -0.81
TOP2A-204ENST00000578412 CADPS2Q86UW7 1296 aa9.98□□□□□ -0.81
TOP2A-204ENST00000578412 SPRYD3Q8NCJ5 442 aa9.97□□□□□ -0.81
TOP2A-204ENST00000578412 UPF1Q92900 1129 aaKnown RBP eCLIP9.97□□□□□ -0.81
TOP2A-204ENST00000578412 LHX6Q9UPM6 363 aa9.97□□□□□ -0.81
TOP2A-204ENST00000578412 PTCD2Q8WV60 388 aaKnown RBP9.96□□□□□ -0.82
TOP2A-204ENST00000578412 CFAP44Q96MT7 982 aa9.96□□□□□ -0.82
TOP2A-204ENST00000578412 PAXIP1Q6ZW49 1069 aaPredicted RBP9.95□□□□□ -0.82
TOP2A-204ENST00000578412 ZNF687Q8N1G0 1237 aa9.95□□□□□ -0.82
TOP2A-204ENST00000578412 TBC1D12O60347 775 aa9.94□□□□□ -0.82
TOP2A-204ENST00000578412 DDX27Q96GQ7 796 aaKnown RBP9.94□□□□□ -0.82
TOP2A-204ENST00000578412 OXER1Q8TDS5 423 aa9.9□□□□□ -0.82
TOP2A-204ENST00000578412 KDM4FA0A1W2PPD8 638 aa9.87□□□□□ -0.83
TOP2A-204ENST00000578412 MFSD10Q14728 455 aa9.87□□□□□ -0.83
TOP2A-204ENST00000578412 ANKRD13DQ6ZTN6 518 aa9.86□□□□□ -0.83
TOP2A-204ENST00000578412 AXIN2Q9Y2T1 843 aa9.86□□□□□ -0.83
TOP2A-204ENST00000578412 MAP3K9P80192 1104 aa9.84□□□□□ -0.83
TOP2A-204ENST00000578412 RNF166Q96A37 237 aaPredicted RBP9.84□□□□□ -0.83
TOP2A-204ENST00000578412 EMILIN3Q9NT22 766 aa9.83□□□□□ -0.84
TOP2A-204ENST00000578412 PSDA5PKW4 1024 aaPredicted RBP9.82□□□□□ -0.84
TOP2A-204ENST00000578412 POTEEQ6S8J3 1075 aa9.82□□□□□ -0.84
TOP2A-204ENST00000578412 MYT1LQ9UL68 1186 aa9.82□□□□□ -0.84
TOP2A-204ENST00000578412 EVI5O60447 810 aa9.81□□□□□ -0.84
TOP2A-204ENST00000578412 LSM11P83369 360 aaKnown RBP eCLIP9.8□□□□□ -0.84
TOP2A-204ENST00000578412 PPP4R3BQ5MIZ7 849 aa9.8□□□□□ -0.84
TOP2A-204ENST00000578412 PBX2P40425 430 aa9.79□□□□□ -0.84
TOP2A-204ENST00000578412 ZNF454Q8N9F8 522 aa9.79□□□□□ -0.84
TOP2A-204ENST00000578412 ARHGAP33O14559 1287 aa9.77□□□□□ -0.85
TOP2A-204ENST00000578412 PSEN2P49810 448 aa9.77□□□□□ -0.85
TOP2A-204ENST00000578412 DPYSL4O14531 572 aa9.75□□□□□ -0.85
TOP2A-204ENST00000578412 PTGER2P43116 358 aa9.75□□□□□ -0.85
TOP2A-204ENST00000578412 ANO8Q9HCE9 1232 aaPredicted RBP9.75□□□□□ -0.85
TOP2A-204ENST00000578412 CAMK2BQ13554 666 aa9.74□□□□□ -0.85
TOP2A-204ENST00000578412 KCNK17Q96T54 332 aa9.74□□□□□ -0.85
TOP2A-204ENST00000578412 WDR70Q9NW82 654 aa9.74□□□□□ -0.85
TOP2A-204ENST00000578412 DMRTA1Q5VZB9 504 aa9.73□□□□□ -0.85
TOP2A-204ENST00000578412 FOSBP53539 338 aa9.72□□□□□ -0.85
TOP2A-204ENST00000578412 TSHZ2Q9NRE2 1034 aa9.72□□□□□ -0.85
TOP2A-204ENST00000578412 KCNH8Q96L42 1107 aa9.71□□□□□ -0.86
TOP2A-204ENST00000578412 JPH4Q96JJ6 628 aa9.7□□□□□ -0.86
TOP2A-204ENST00000578412 E2F4Q16254 413 aa9.69□□□□□ -0.86
TOP2A-204ENST00000578412 ADGRD1Q6QNK2 874 aa9.69□□□□□ -0.86
TOP2A-204ENST00000578412 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
TOP2A-204ENST00000578412 ADAM33Q9BZ11 813 aa9.68□□□□□ -0.86
TOP2A-204ENST00000578412 BCL2L12Q9HB09 334 aa9.67□□□□□ -0.86
TOP2A-204ENST00000578412 PCDHGA10Q9Y5H3 936 aa9.67□□□□□ -0.86
TOP2A-204ENST00000578412 PTPREP23469 700 aa9.66□□□□□ -0.86
TOP2A-204ENST00000578412 DDX12PQ92771 950 aa9.64□□□□□ -0.87
TOP2A-204ENST00000578412 TK2O00142 265 aa9.63□□□□□ -0.87
TOP2A-204ENST00000578412 STAC3Q96MF2 364 aa9.63□□□□□ -0.87
TOP2A-204ENST00000578412 PHF14O94880 888 aa9.62□□□□□ -0.87
TOP2A-204ENST00000578412 TYW1BQ6NUM6 668 aa9.62□□□□□ -0.87
TOP2A-204ENST00000578412 RBM33Q96EV2 1170 aaKnown RBP9.61□□□□□ -0.87
TOP2A-204ENST00000578412 VPS9D1Q9Y2B5 631 aa9.61□□□□□ -0.87
TOP2A-204ENST00000578412 FBXW7Q969H0 707 aa9.6□□□□□ -0.87
TOP2A-204ENST00000578412 HRO43593 1189 aa9.59□□□□□ -0.87
TOP2A-204ENST00000578412 PDIA6Q15084 440 aa9.59□□□□□ -0.87
TOP2A-204ENST00000578412 SPDYE16A6NNV3 312 aaPredicted RBP9.58□□□□□ -0.88
TOP2A-204ENST00000578412 COL9A1P20849 921 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms