RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 MFSD10Q14728 455 aa5.41□□□□□ -1.54
PTP4A1-204ENST00000578299 TMC2Q8TDI7 906 aa5.41□□□□□ -1.54
PTP4A1-204ENST00000578299 LARP6Q9BRS8 491 aaKnown RBP5.41□□□□□ -1.54
PTP4A1-204ENST00000578299 GPHNQ9NQX3 736 aaPredicted RBP5.41□□□□□ -1.54
PTP4A1-204ENST00000578299 C3orf67Q6ZVT6 689 aa5.4□□□□□ -1.54
PTP4A1-204ENST00000578299 P3H3Q8IVL6 736 aa5.4□□□□□ -1.54
PTP4A1-204ENST00000578299 DDX27Q96GQ7 796 aaKnown RBP5.4□□□□□ -1.54
PTP4A1-204ENST00000578299 E2F4Q16254 413 aa5.38□□□□□ -1.55
PTP4A1-204ENST00000578299 C2orf72A6NCS6 295 aa5.37□□□□□ -1.55
PTP4A1-204ENST00000578299 KIF3CO14782 793 aa5.37□□□□□ -1.55
PTP4A1-204ENST00000578299 FOXK1P85037 733 aa5.37□□□□□ -1.55
PTP4A1-204ENST00000578299 PPP1R15BQ5SWA1 713 aa5.37□□□□□ -1.55
PTP4A1-204ENST00000578299 BCANQ96GW7 911 aa5.37□□□□□ -1.55
PTP4A1-204ENST00000578299 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.37□□□□□ -1.55
PTP4A1-204ENST00000578299 DSG2Q14126 1118 aa5.36□□□□□ -1.55
PTP4A1-204ENST00000578299 CAMK2BQ13554 666 aa5.35□□□□□ -1.55
PTP4A1-204ENST00000578299 TMEM92Q6UXU6 159 aa5.35□□□□□ -1.55
PTP4A1-204ENST00000578299 MAMSTRQ6ZN01 415 aa5.35□□□□□ -1.55
PTP4A1-204ENST00000578299 KCNV2Q8TDN2 545 aa5.35□□□□□ -1.55
PTP4A1-204ENST00000578299 ARHGEF1Q92888 912 aaKnown RBP5.35□□□□□ -1.55
PTP4A1-204ENST00000578299 POTEB2H3BUK9 544 aa5.34□□□□□ -1.55
PTP4A1-204ENST00000578299 POTEJP0CG39 1038 aa5.34□□□□□ -1.55
PTP4A1-204ENST00000578299 NBR1Q14596 966 aa5.34□□□□□ -1.55
PTP4A1-204ENST00000578299 PLPP6Q8IY26 295 aa5.34□□□□□ -1.55
PTP4A1-204ENST00000578299 SCUBE2Q9NQ36 999 aa5.34□□□□□ -1.55
PTP4A1-204ENST00000578299 ARIH1Q9Y4X5 557 aaPredicted RBP5.32□□□□□ -1.56
PTP4A1-204ENST00000578299 SLAIN1Q8ND83 568 aa5.3□□□□□ -1.56
PTP4A1-204ENST00000578299 EMILIN3Q9NT22 766 aa5.3□□□□□ -1.56
PTP4A1-204ENST00000578299 SLC34A2O95436 690 aa5.28□□□□□ -1.56
PTP4A1-204ENST00000578299 LHX8Q68G74 356 aa5.28□□□□□ -1.56
PTP4A1-204ENST00000578299 OXER1Q8TDS5 423 aa5.28□□□□□ -1.56
PTP4A1-204ENST00000578299 SPDYE16A6NNV3 312 aaPredicted RBP5.27□□□□□ -1.57
PTP4A1-204ENST00000578299 DPYSL4O14531 572 aa5.27□□□□□ -1.57
PTP4A1-204ENST00000578299 MAP3K9P80192 1104 aa5.27□□□□□ -1.57
PTP4A1-204ENST00000578299 PTCD2Q8WV60 388 aaKnown RBP5.27□□□□□ -1.57
PTP4A1-204ENST00000578299 TBC1D12O60347 775 aa5.26□□□□□ -1.57
PTP4A1-204ENST00000578299 PDIA6Q15084 440 aa5.26□□□□□ -1.57
PTP4A1-204ENST00000578299 DOK7Q18PE1 504 aa5.26□□□□□ -1.57
PTP4A1-204ENST00000578299 UPF1Q92900 1129 aaKnown RBP eCLIP5.26□□□□□ -1.57
PTP4A1-204ENST00000578299 TULP1O00294 542 aaPredicted RBP5.25□□□□□ -1.57
PTP4A1-204ENST00000578299 OTUD5Q96G74 571 aa5.25□□□□□ -1.57
PTP4A1-204ENST00000578299 TESPA1A2RU30 521 aaPredicted RBP5.24□□□□□ -1.57
PTP4A1-204ENST00000578299 ZNF316A6NFI3 1004 aaPredicted RBP5.24□□□□□ -1.57
PTP4A1-204ENST00000578299 RIMBP2O15034 1052 aa5.24□□□□□ -1.57
PTP4A1-204ENST00000578299 SEMA3EO15041 775 aa5.24□□□□□ -1.57
PTP4A1-204ENST00000578299 SNPHO15079 494 aa5.24□□□□□ -1.57
PTP4A1-204ENST00000578299 HOXB3P14651 431 aaPredicted RBP5.23□□□□□ -1.57
PTP4A1-204ENST00000578299 SMYD5Q6GMV2 418 aa5.23□□□□□ -1.57
PTP4A1-204ENST00000578299 ZSWIM6Q9HCJ5 1215 aa5.23□□□□□ -1.57
PTP4A1-204ENST00000578299 PCDHGA4Q9Y5G9 962 aa5.23□□□□□ -1.57
PTP4A1-204ENST00000578299 EVI5O60447 810 aa5.22□□□□□ -1.57
PTP4A1-204ENST00000578299 ZNF710Q8N1W2 664 aa5.22□□□□□ -1.57
PTP4A1-204ENST00000578299 PTGER2P43116 358 aa5.2□□□□□ -1.58
PTP4A1-204ENST00000578299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.2□□□□□ -1.58
PTP4A1-204ENST00000578299 ANO8Q9HCE9 1232 aaPredicted RBP5.2□□□□□ -1.58
PTP4A1-204ENST00000578299 MLLT3P42568 568 aaPredicted RBP5.19□□□□□ -1.58
PTP4A1-204ENST00000578299 GPR153Q6NV75 609 aa5.19□□□□□ -1.58
PTP4A1-204ENST00000578299 KDM4FA0A1W2PPD8 638 aa5.18□□□□□ -1.58
PTP4A1-204ENST00000578299 ARSIQ5FYB1 569 aa5.18□□□□□ -1.58
PTP4A1-204ENST00000578299 LMOD2Q6P5Q4 547 aa5.18□□□□□ -1.58
PTP4A1-204ENST00000578299 GRXCR2A6NFK2 248 aa5.17□□□□□ -1.58
PTP4A1-204ENST00000578299 DDX12PQ92771 950 aa5.17□□□□□ -1.58
PTP4A1-204ENST00000578299 PHF14O94880 888 aa5.16□□□□□ -1.58
PTP4A1-204ENST00000578299 NUDT7P0C024 238 aa5.16□□□□□ -1.58
PTP4A1-204ENST00000578299 HOXB1P14653 301 aaPredicted RBP5.16□□□□□ -1.58
PTP4A1-204ENST00000578299 OSBPP22059 807 aa5.15□□□□□ -1.59
PTP4A1-204ENST00000578299 TPRNQ4KMQ1 711 aa5.15□□□□□ -1.59
PTP4A1-204ENST00000578299 KHSRPQ92945 711 aaKnown RBP eCLIP5.15□□□□□ -1.592e-7■□□□□ 10.2
PTP4A1-204ENST00000578299 JPH4Q96JJ6 628 aa5.15□□□□□ -1.59
PTP4A1-204ENST00000578299 EPAS1Q99814 870 aa5.15□□□□□ -1.59
PTP4A1-204ENST00000578299 PSDA5PKW4 1024 aaPredicted RBP5.14□□□□□ -1.59
PTP4A1-204ENST00000578299 FOSBP53539 338 aa5.14□□□□□ -1.59
PTP4A1-204ENST00000578299 RBM26Q5T8P6 1007 aaKnown RBP5.14□□□□□ -1.59
PTP4A1-204ENST00000578299 TYW1BQ6NUM6 668 aa5.13□□□□□ -1.59
PTP4A1-204ENST00000578299 GPIHBP1Q8IV16 184 aa5.13□□□□□ -1.59
PTP4A1-204ENST00000578299 ZNF454Q8N9F8 522 aa5.13□□□□□ -1.59
PTP4A1-204ENST00000578299 FBXW7Q969H0 707 aa5.13□□□□□ -1.59
PTP4A1-204ENST00000578299 LHX6Q9UPM6 363 aa5.13□□□□□ -1.59
PTP4A1-204ENST00000578299 PCDHGA10Q9Y5H3 936 aa5.13□□□□□ -1.59
PTP4A1-204ENST00000578299 ST18O60284 1047 aa5.12□□□□□ -1.59
PTP4A1-204ENST00000578299 EN1Q05925 392 aaPredicted RBP5.12□□□□□ -1.59
PTP4A1-204ENST00000578299 MAP3K7O43318 606 aa5.11□□□□□ -1.59
PTP4A1-204ENST00000578299 PRKCSHP14314 528 aaPredicted RBP5.11□□□□□ -1.59
PTP4A1-204ENST00000578299 PPP4R3BQ5MIZ7 849 aa5.11□□□□□ -1.59
PTP4A1-204ENST00000578299 ZC3H15Q8WU90 426 aaKnown RBP5.11□□□□□ -1.59
PTP4A1-204ENST00000578299 ZDHHC16Q969W1 377 aa5.11□□□□□ -1.59
PTP4A1-204ENST00000578299 NUTM2FA1L443 756 aa5.1□□□□□ -1.59
PTP4A1-204ENST00000578299 PRIM1P49642 420 aaKnown RBP5.1□□□□□ -1.59
PTP4A1-204ENST00000578299 RBM33Q96EV2 1170 aaKnown RBP5.1□□□□□ -1.59
PTP4A1-204ENST00000578299 FAM163AQ96GL9 167 aaPredicted RBP5.1□□□□□ -1.59
PTP4A1-204ENST00000578299 ERBB3P21860 1342 aa5.09□□□□□ -1.59
PTP4A1-204ENST00000578299 FCHSD2O94868 740 aa5.09□□□□□ -1.59
PTP4A1-204ENST00000578299 EMP3P54852 163 aa5.09□□□□□ -1.59
PTP4A1-204ENST00000578299 ZMYND10O75800 440 aa5.08□□□□□ -1.6
PTP4A1-204ENST00000578299 MARVELD3Q96A59 401 aa5.08□□□□□ -1.6
PTP4A1-204ENST00000578299 ADAM33Q9BZ11 813 aa5.08□□□□□ -1.6
PTP4A1-204ENST00000578299 BCL2L12Q9HB09 334 aa5.08□□□□□ -1.6
PTP4A1-204ENST00000578299 GPR37O15354 613 aa5.07□□□□□ -1.6
PTP4A1-204ENST00000578299 PTGDRQ13258 359 aa5.07□□□□□ -1.6
PTP4A1-204ENST00000578299 TSR1Q2NL82 804 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms