RNA–Protein interactions for RNA: ENST00000578148.1

RAB11FIP4-202, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 3

Gene RAB11FIP4, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-202ENST00000578148 PLPPR3Q6T4P5 718 aa14.7□□□□□ -0.06
RAB11FIP4-202ENST00000578148 KIF14Q15058 1648 aa14.7□□□□□ -0.06
RAB11FIP4-202ENST00000578148 SIGLEC1Q9BZZ2 1709 aa14.69□□□□□ -0.06
RAB11FIP4-202ENST00000578148 YEATS2Q9ULM3 1422 aa14.68□□□□□ -0.06
RAB11FIP4-202ENST00000578148 TROQ12816 1431 aaPredicted RBP14.66□□□□□ -0.06
RAB11FIP4-202ENST00000578148 SCAPERQ9BY12 1400 aa14.66□□□□□ -0.06
RAB11FIP4-202ENST00000578148 LRRIQ1Q96JM4 1722 aa14.66□□□□□ -0.06
RAB11FIP4-202ENST00000578148 LMTK3Q96Q04 1460 aa14.66□□□□□ -0.06
RAB11FIP4-202ENST00000578148 CDK11AQ9UQ88 783 aaPredicted RBP14.65□□□□□ -0.06
RAB11FIP4-202ENST00000578148 FER1L4A9Z1Z3 1794 aa14.65□□□□□ -0.06
RAB11FIP4-202ENST00000578148 EHMT2Q96KQ7 1210 aa14.64□□□□□ -0.07
RAB11FIP4-202ENST00000578148 CLIP1P30622 1438 aa14.64□□□□□ -0.07
RAB11FIP4-202ENST00000578148 KDM5CP41229 1560 aa14.63□□□□□ -0.07
RAB11FIP4-202ENST00000578148 ARHGAP5Q13017 1502 aa14.62□□□□□ -0.07
RAB11FIP4-202ENST00000578148 EFCAB2Q5VUJ9 269 aa14.62□□□□□ -0.07
RAB11FIP4-202ENST00000578148 C9orf84Q5VXU9 1444 aa14.62□□□□□ -0.07
RAB11FIP4-202ENST00000578148 ATP1B4Q9UN42 357 aaPredicted RBP14.62□□□□□ -0.07
RAB11FIP4-202ENST00000578148 ZNF518AQ6AHZ1 1483 aa14.62□□□□□ -0.07
RAB11FIP4-202ENST00000578148 ATP10AO60312 1499 aa14.61□□□□□ -0.07
RAB11FIP4-202ENST00000578148 CCDC18Q5T9S5 1454 aa14.61□□□□□ -0.07
RAB11FIP4-202ENST00000578148 ARHGEF12Q9NZN5 1544 aa14.61□□□□□ -0.07
RAB11FIP4-202ENST00000578148 PREX2Q70Z35 1606 aa14.59□□□□□ -0.07
RAB11FIP4-202ENST00000578148 CASKIN1Q8WXD9 1431 aa14.59□□□□□ -0.07
RAB11FIP4-202ENST00000578148 CDC42BPBQ9Y5S2 1711 aa14.58□□□□□ -0.07
RAB11FIP4-202ENST00000578148 REREQ9P2R6 1566 aa14.57□□□□□ -0.08
RAB11FIP4-202ENST00000578148 ABCC1P33527 1531 aa14.56□□□□□ -0.08
RAB11FIP4-202ENST00000578148 DIP2CQ9Y2E4 1556 aa14.56□□□□□ -0.08
RAB11FIP4-202ENST00000578148 FYCO1Q9BQS8 1478 aa14.56□□□□□ -0.08
RAB11FIP4-202ENST00000578148 ITSN2Q9NZM3 1697 aa14.55□□□□□ -0.08
RAB11FIP4-202ENST00000578148 ABCA6Q8N139 1617 aa14.54□□□□□ -0.08
RAB11FIP4-202ENST00000578148 CDC42BPAQ5VT25 1732 aa14.53□□□□□ -0.08
RAB11FIP4-202ENST00000578148 PREX1Q8TCU6 1659 aa14.53□□□□□ -0.08
RAB11FIP4-202ENST00000578148 MLH3Q9UHC1 1453 aa14.53□□□□□ -0.08
RAB11FIP4-202ENST00000578148 MLECQ14165 292 aa14.53□□□□□ -0.08
RAB11FIP4-202ENST00000578148 FBXO41Q8TF61 875 aa14.53□□□□□ -0.08
RAB11FIP4-202ENST00000578148 AFAP1Q8N556 730 aa14.51□□□□□ -0.09
RAB11FIP4-202ENST00000578148 HSPA2P54652 639 aa14.5□□□□□ -0.09
RAB11FIP4-202ENST00000578148 AGLP35573 1532 aa14.5□□□□□ -0.09
RAB11FIP4-202ENST00000578148 TRAPPC8Q9Y2L5 1435 aa14.49□□□□□ -0.09
RAB11FIP4-202ENST00000578148 SETD1BQ9UPS6 1966 aaKnown RBP14.49□□□□□ -0.09
RAB11FIP4-202ENST00000578148 KIDINS220Q9ULH0 1771 aa14.48□□□□□ -0.09
RAB11FIP4-202ENST00000578148 SAMD9LQ8IVG5 1584 aa14.46□□□□□ -0.09
RAB11FIP4-202ENST00000578148 MYT1LQ9UL68 1186 aa14.45□□□□□ -0.1
RAB11FIP4-202ENST00000578148 C3P01024 1663 aa14.45□□□□□ -0.1
RAB11FIP4-202ENST00000578148 UHRF1BP1Q6BDS2 1440 aa14.44□□□□□ -0.1
RAB11FIP4-202ENST00000578148 SYCP2Q9BX26 1530 aa14.44□□□□□ -0.1
RAB11FIP4-202ENST00000578148 GPATCH8Q9UKJ3 1502 aaKnown RBP14.44□□□□□ -0.1
RAB11FIP4-202ENST00000578148 CEBPAP49715 358 aaPredicted RBP14.42□□□□□ -0.1
RAB11FIP4-202ENST00000578148 CNTLNQ9NXG0 1405 aa14.41□□□□□ -0.1
RAB11FIP4-202ENST00000578148 PLEKHH2Q8IVE3 1493 aa14.41□□□□□ -0.1
RAB11FIP4-202ENST00000578148 STRCQ7RTU9 1775 aa14.41□□□□□ -0.1
RAB11FIP4-202ENST00000578148 INO80Q9ULG1 1556 aaPredicted RBP14.4□□□□□ -0.1
RAB11FIP4-202ENST00000578148 KIAA1107Q9UPP5 1409 aa14.4□□□□□ -0.1
RAB11FIP4-202ENST00000578148 MROH2AA6NES4 1674 aa14.39□□□□□ -0.11
RAB11FIP4-202ENST00000578148 ATP7AQ04656 1500 aa14.39□□□□□ -0.11
RAB11FIP4-202ENST00000578148 PLXNC1O60486 1568 aa14.39□□□□□ -0.11
RAB11FIP4-202ENST00000578148 EHBP1L1Q8N3D4 1523 aa14.38□□□□□ -0.11
RAB11FIP4-202ENST00000578148 MTUS2Q5JR59 1369 aa14.37□□□□□ -0.11
RAB11FIP4-202ENST00000578148 SPAG9O60271 1321 aaKnown RBP14.37□□□□□ -0.11
RAB11FIP4-202ENST00000578148 CCNB3Q8WWL7 1395 aa14.36□□□□□ -0.11
RAB11FIP4-202ENST00000578148 TIAM1Q13009 1591 aa14.36□□□□□ -0.11
RAB11FIP4-202ENST00000578148 CERKQ8TCT0 537 aa14.36□□□□□ -0.11
RAB11FIP4-202ENST00000578148 ESF1Q9H501 851 aaKnown RBP14.36□□□□□ -0.11
RAB11FIP4-202ENST00000578148 ZNF777Q9ULD5 760 aaPredicted RBP14.36□□□□□ -0.11
RAB11FIP4-202ENST00000578148 SUPT6HQ7KZ85 1726 aaKnown RBP14.35□□□□□ -0.11
RAB11FIP4-202ENST00000578148 CFDP1Q9UEE9 299 aaPredicted RBP14.35□□□□□ -0.11
RAB11FIP4-202ENST00000578148 NPATQ14207 1427 aa14.34□□□□□ -0.11
RAB11FIP4-202ENST00000578148 DMRT2Q9Y5R5 561 aa14.34□□□□□ -0.11
RAB11FIP4-202ENST00000578148 PTPRTO14522 1441 aa14.33□□□□□ -0.11
RAB11FIP4-202ENST00000578148 ADGBQ8N7X0 1667 aa14.33□□□□□ -0.11
RAB11FIP4-202ENST00000578148 A2MP01023 1474 aa14.33□□□□□ -0.12
RAB11FIP4-202ENST00000578148 CEP162Q5TB80 1403 aa14.32□□□□□ -0.12
RAB11FIP4-202ENST00000578148 HNRNPMP52272 730 aaKnown RBP eCLIP14.32□□□□□ -0.12
RAB11FIP4-202ENST00000578148 NCOA1Q15788 1441 aa14.32□□□□□ -0.12
RAB11FIP4-202ENST00000578148 CLTCQ00610 1675 aaKnown RBP14.31□□□□□ -0.12
RAB11FIP4-202ENST00000578148 ZNF142P52746 1687 aaPredicted RBP14.3□□□□□ -0.12
RAB11FIP4-202ENST00000578148 MBD5Q9P267 1494 aa14.3□□□□□ -0.12
RAB11FIP4-202ENST00000578148 ZMYM3Q14202 1370 aa14.29□□□□□ -0.12
RAB11FIP4-202ENST00000578148 MYO3AQ8NEV4 1616 aa14.29□□□□□ -0.12
RAB11FIP4-202ENST00000578148 CAMSAP1Q5T5Y3 1602 aa14.27□□□□□ -0.12
RAB11FIP4-202ENST00000578148 RTEL1-TNFRSF6BF6WH68 1400 aa14.27□□□□□ -0.12
RAB11FIP4-202ENST00000578148 LTBP4Q8N2S1 1624 aa14.26□□□□□ -0.13
RAB11FIP4-202ENST00000578148 CEP170BQ9Y4F5 1589 aaPredicted RBP14.26□□□□□ -0.13
RAB11FIP4-202ENST00000578148 PTPRKQ15262 1439 aa14.25□□□□□ -0.13
RAB11FIP4-202ENST00000578148 PLA2R1Q13018 1463 aa14.25□□□□□ -0.13
RAB11FIP4-202ENST00000578148 NCOA2Q15596 1464 aa14.25□□□□□ -0.13
RAB11FIP4-202ENST00000578148 CCDC141Q6ZP82 1450 aa14.25□□□□□ -0.13
RAB11FIP4-202ENST00000578148 ZNF644Q9H582 1327 aaPredicted RBP14.24□□□□□ -0.13
RAB11FIP4-202ENST00000578148 PPP6R1Q9UPN7 881 aa14.24□□□□□ -0.13
RAB11FIP4-202ENST00000578148 FAM135AQ9P2D6 1515 aa14.24□□□□□ -0.13
RAB11FIP4-202ENST00000578148 CAMSAP2Q08AD1 1489 aa14.24□□□□□ -0.13
RAB11FIP4-202ENST00000578148 IQSEC2Q5JU85 1478 aa14.24□□□□□ -0.13
RAB11FIP4-202ENST00000578148 DHX29Q7Z478 1369 aaKnown RBP14.22□□□□□ -0.13
RAB11FIP4-202ENST00000578148 GGT6Q6P531 493 aa14.21□□□□□ -0.13
RAB11FIP4-202ENST00000578148 ARHGEF5Q12774 1597 aa14.21□□□□□ -0.14
RAB11FIP4-202ENST00000578148 TCOF1Q13428 1488 aaKnown RBP14.2□□□□□ -0.14
RAB11FIP4-202ENST00000578148 KDM5DQ9BY66 1539 aa14.2□□□□□ -0.14
RAB11FIP4-202ENST00000578148 VPS8Q8N3P4 1428 aa14.19□□□□□ -0.14
RAB11FIP4-202ENST00000578148 A2ML1A8K2U0 1454 aa14.18□□□□□ -0.14
RAB11FIP4-202ENST00000578148 PKD2Q13563 968 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms