RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 DCAF11Q8TEB1 546 aa13.61□□□□□ -0.23
SEC22B-201ENST00000578049 KANK1Q14678 1352 aa13.61□□□□□ -0.23
SEC22B-201ENST00000578049 CHMP4AQ9BY43 222 aa13.61□□□□□ -0.23
SEC22B-201ENST00000578049 PLCB2Q00722 1185 aa13.61□□□□□ -0.23
SEC22B-201ENST00000578049 FANCIQ9NVI1 1328 aa13.6□□□□□ -0.23
SEC22B-201ENST00000578049 GOLGA6L3A6NEY3 463 aa13.59□□□□□ -0.23
SEC22B-201ENST00000578049 NLRP13Q86W25 1043 aa13.59□□□□□ -0.23
SEC22B-201ENST00000578049 FGD1P98174 961 aa13.58□□□□□ -0.24
SEC22B-201ENST00000578049 POGKQ9P215 609 aa13.58□□□□□ -0.24
SEC22B-201ENST00000578049 HTATSF1O43719 755 aaKnown RBP13.58□□□□□ -0.24
SEC22B-201ENST00000578049 KCNJ4P48050 445 aa13.58□□□□□ -0.24
SEC22B-201ENST00000578049 CUX2O14529 1486 aa13.57□□□□□ -0.24
SEC22B-201ENST00000578049 MORC1Q86VD1 984 aa13.57□□□□□ -0.24
SEC22B-201ENST00000578049 RSPH6AQ9H0K4 717 aa13.57□□□□□ -0.24
SEC22B-201ENST00000578049 KCNH8Q96L42 1107 aa13.56□□□□□ -0.24
SEC22B-201ENST00000578049 U2SURPO15042 1029 aaKnown RBP13.56□□□□□ -0.24
SEC22B-201ENST00000578049 OS9Q13438 667 aaPredicted RBP13.54□□□□□ -0.24
SEC22B-201ENST00000578049 GOLGA2Q08379 1002 aa13.53□□□□□ -0.24
SEC22B-201ENST00000578049 MPHOSPH9Q99550 1183 aa13.53□□□□□ -0.24
SEC22B-201ENST00000578049 NGEFQ8N5V2 710 aa13.53□□□□□ -0.24
SEC22B-201ENST00000578049 EIF3AQ14152 1382 aaKnown RBP13.52□□□□□ -0.24
SEC22B-201ENST00000578049 PKD2Q13563 968 aa13.52□□□□□ -0.24
SEC22B-201ENST00000578049 CECR2Q9BXF3 1484 aa13.52□□□□□ -0.24
SEC22B-201ENST00000578049 DDX11L8A8MPP1 907 aa13.52□□□□□ -0.25
SEC22B-201ENST00000578049 HDAC5Q9UQL6 1122 aa13.52□□□□□ -0.25
SEC22B-201ENST00000578049 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
SEC22B-201ENST00000578049 ZBED9Q6R2W3 1325 aa13.51□□□□□ -0.25
SEC22B-201ENST00000578049 CSPP1Q1MSJ5 1256 aa13.51□□□□□ -0.25
SEC22B-201ENST00000578049 SENP3-EIF4A1A0A087X0R7 540 aa13.51□□□□□ -0.25
SEC22B-201ENST00000578049 HDGFP51858 240 aaKnown RBP13.51□□□□□ -0.25
SEC22B-201ENST00000578049 KANK4Q5T7N3 995 aaPredicted RBP13.51□□□□□ -0.25
SEC22B-201ENST00000578049 KIAA1211Q6ZU35 1233 aa13.5□□□□□ -0.25
SEC22B-201ENST00000578049 CENPQQ7L2Z9 268 aaPredicted RBP13.5□□□□□ -0.25
SEC22B-201ENST00000578049 C14orf37Q86TY3 774 aa13.5□□□□□ -0.25
SEC22B-201ENST00000578049 DRC7Q8IY82 874 aa13.49□□□□□ -0.25
SEC22B-201ENST00000578049 KIF15Q9NS87 1388 aa13.49□□□□□ -0.25
SEC22B-201ENST00000578049 SKOR2Q2VWA4 1001 aaPredicted RBP13.49□□□□□ -0.25
SEC22B-201ENST00000578049 DHX57Q6P158 1386 aaKnown RBP13.49□□□□□ -0.25
SEC22B-201ENST00000578049 PHF14O94880 888 aa13.48□□□□□ -0.25
SEC22B-201ENST00000578049 SLKQ9H2G2 1235 aaPredicted RBP13.48□□□□□ -0.25
SEC22B-201ENST00000578049 RSPH4AQ5TD94 716 aa13.48□□□□□ -0.25
SEC22B-201ENST00000578049 CCDC88BA6NC98 1476 aa13.47□□□□□ -0.25
SEC22B-201ENST00000578049 HMMRO75330 724 aa13.47□□□□□ -0.25
SEC22B-201ENST00000578049 MYBBP1AQ9BQG0 1328 aaKnown RBP13.46□□□□□ -0.25
SEC22B-201ENST00000578049 GSE1Q14687 1217 aa13.46□□□□□ -0.25
SEC22B-201ENST00000578049 FAM161AQ3B820 660 aa13.46□□□□□ -0.25
SEC22B-201ENST00000578049 HDGFL2Q7Z4V5 671 aaPredicted RBP13.46□□□□□ -0.25
SEC22B-201ENST00000578049 CCDC34Q96HJ3 373 aa13.45□□□□□ -0.26
SEC22B-201ENST00000578049 CENPJQ9HC77 1338 aaPredicted RBP13.45□□□□□ -0.26
SEC22B-201ENST00000578049 CGNL1Q0VF96 1302 aa13.45□□□□□ -0.26
SEC22B-201ENST00000578049 CARMIL2Q6F5E8 1435 aa13.45□□□□□ -0.26
SEC22B-201ENST00000578049 L3MBTL2Q969R5 705 aa13.44□□□□□ -0.26
SEC22B-201ENST00000578049 NUP155O75694 1391 aa13.44□□□□□ -0.26
SEC22B-201ENST00000578049 TPM4P67936 248 aa13.44□□□□□ -0.26
SEC22B-201ENST00000578049 SMARCA2P51531 1590 aa13.44□□□□□ -0.26
SEC22B-201ENST00000578049 PDE4AP27815 886 aa13.43□□□□□ -0.26
SEC22B-201ENST00000578049 ITPRIPQ8IWB1 547 aa13.43□□□□□ -0.26
SEC22B-201ENST00000578049 RTF1Q92541 710 aaKnown RBP13.43□□□□□ -0.26
SEC22B-201ENST00000578049 AAMPQ13685 434 aa13.42□□□□□ -0.26
SEC22B-201ENST00000578049 PRKRIP1Q9H875 184 aaPredicted RBP13.42□□□□□ -0.26
SEC22B-201ENST00000578049 U2AF1L5P0DN76 240 aaPredicted RBP13.42□□□□□ -0.26
SEC22B-201ENST00000578049 U2AF1Q01081 240 aaKnown RBP eCLIP13.42□□□□□ -0.26
SEC22B-201ENST00000578049 SRPK2P78362 688 aaKnown RBP13.42□□□□□ -0.26
SEC22B-201ENST00000578049 HSP90AA2PQ14568 343 aaPredicted RBP13.42□□□□□ -0.26
SEC22B-201ENST00000578049 ST18O60284 1047 aa13.42□□□□□ -0.26
SEC22B-201ENST00000578049 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
SEC22B-201ENST00000578049 MROH2BQ7Z745 1585 aa13.42□□□□□ -0.26
SEC22B-201ENST00000578049 TPRNQ4KMQ1 711 aa13.41□□□□□ -0.26
SEC22B-201ENST00000578049 CHMP4CQ96CF2 233 aa13.41□□□□□ -0.26
SEC22B-201ENST00000578049 GZF1Q9H116 711 aaPredicted RBP13.41□□□□□ -0.26
SEC22B-201ENST00000578049 ZBTB7CA1YPR0 619 aa13.41□□□□□ -0.26
SEC22B-201ENST00000578049 SPRYD3Q8NCJ5 442 aa13.41□□□□□ -0.26
SEC22B-201ENST00000578049 TOP2AP11388 1531 aaKnown RBP13.4□□□□□ -0.26
SEC22B-201ENST00000578049 KIF3AQ9Y496 699 aa13.4□□□□□ -0.26
SEC22B-201ENST00000578049 CCDC18Q5T9S5 1454 aa13.39□□□□□ -0.27
SEC22B-201ENST00000578049 MFAP1P55081 439 aaKnown RBP13.39□□□□□ -0.27
SEC22B-201ENST00000578049 SMC4Q9NTJ3 1288 aa13.39□□□□□ -0.27
SEC22B-201ENST00000578049 RRP1P56182 461 aaKnown RBP13.38□□□□□ -0.27
SEC22B-201ENST00000578049 RAPGEF2Q9Y4G8 1499 aa13.38□□□□□ -0.27
SEC22B-201ENST00000578049 ATP6V1DQ9Y5K8 247 aa13.38□□□□□ -0.27
SEC22B-201ENST00000578049 ABCC8Q09428 1581 aa13.38□□□□□ -0.27
SEC22B-201ENST00000578049 EIF4G1Q04637 1599 aaKnown RBP13.38□□□□□ -0.27
SEC22B-201ENST00000578049 NAP1L2Q9ULW6 460 aaPredicted RBP13.38□□□□□ -0.27
SEC22B-201ENST00000578049 E9PSI1 815 aa13.37□□□□□ -0.27
SEC22B-201ENST00000578049 GPATCH3Q96I76 525 aa13.37□□□□□ -0.27
SEC22B-201ENST00000578049 TERF2IPQ9NYB0 399 aa13.37□□□□□ -0.27
SEC22B-201ENST00000578049 STK31Q9BXU1 1019 aa13.36□□□□□ -0.27
SEC22B-201ENST00000578049 EFCAB2Q5VUJ9 269 aa13.36□□□□□ -0.27
SEC22B-201ENST00000578049 SPAG9O60271 1321 aaKnown RBP13.35□□□□□ -0.27
SEC22B-201ENST00000578049 TNNT3P45378 269 aaPredicted RBP13.35□□□□□ -0.27
SEC22B-201ENST00000578049 GNL2Q13823 731 aaKnown RBP13.35□□□□□ -0.27
SEC22B-201ENST00000578049 PLPPR3Q6T4P5 718 aa13.35□□□□□ -0.27
SEC22B-201ENST00000578049 GOLGA6L1Q8N7Z2 621 aa13.33□□□□□ -0.28
SEC22B-201ENST00000578049 CHMP5Q9NZZ3 219 aa13.32□□□□□ -0.28
SEC22B-201ENST00000578049 STAC3Q96MF2 364 aa13.32□□□□□ -0.28
SEC22B-201ENST00000578049 DDX49Q9Y6V7 483 aaKnown RBP13.31□□□□□ -0.28
SEC22B-201ENST00000578049 UACAQ9BZF9 1416 aa13.31□□□□□ -0.28
SEC22B-201ENST00000578049 A0A0G2JS52 829 aa13.3□□□□□ -0.28
SEC22B-201ENST00000578049 ZKSCAN2Q63HK3 967 aa13.3□□□□□ -0.28
SEC22B-201ENST00000578049 FOXD1Q16676 465 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms