RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 CASKIN1Q8WXD9 1431 aa24.3■■□□□ 1.48
RN7SL560P-201ENST00000577943 ZFYVE16Q7Z3T8 1539 aa24.3■■□□□ 1.48
RN7SL560P-201ENST00000577943 MADDQ8WXG6 1647 aa24.29■■□□□ 1.48
RN7SL560P-201ENST00000577943 PTPRMP28827 1452 aa24.29■■□□□ 1.48
RN7SL560P-201ENST00000577943 CCDC18Q5T9S5 1454 aa24.29■■□□□ 1.48
RN7SL560P-201ENST00000577943 POGZQ7Z3K3 1410 aa24.27■■□□□ 1.48
RN7SL560P-201ENST00000577943 MAGI2Q86UL8 1455 aa24.27■■□□□ 1.48
RN7SL560P-201ENST00000577943 YEATS2Q9ULM3 1422 aa24.27■■□□□ 1.48
RN7SL560P-201ENST00000577943 ARHGAP5Q13017 1502 aa24.26■■□□□ 1.47
RN7SL560P-201ENST00000577943 CDC42BPBQ9Y5S2 1711 aa24.24■■□□□ 1.47
RN7SL560P-201ENST00000577943 RIMS1Q86UR5 1692 aaKnown RBP24.24■■□□□ 1.47
RN7SL560P-201ENST00000577943 FYCO1Q9BQS8 1478 aa24.23■■□□□ 1.47
RN7SL560P-201ENST00000577943 SIGLEC1Q9BZZ2 1709 aa24.22■■□□□ 1.47
RN7SL560P-201ENST00000577943 PREX2Q70Z35 1606 aa24.19■■□□□ 1.46
RN7SL560P-201ENST00000577943 ZNF518AQ6AHZ1 1483 aa24.19■■□□□ 1.46
RN7SL560P-201ENST00000577943 CDC42BPAQ5VT25 1732 aa24.16■■□□□ 1.46
RN7SL560P-201ENST00000577943 ATP10AO60312 1499 aa24.15■■□□□ 1.46
RN7SL560P-201ENST00000577943 FER1L4A9Z1Z3 1794 aa24.15■■□□□ 1.46
RN7SL560P-201ENST00000577943 MLECQ14165 292 aa24.14■■□□□ 1.45
RN7SL560P-201ENST00000577943 MYT1LQ9UL68 1186 aa24.14■■□□□ 1.45
RN7SL560P-201ENST00000577943 KDM5CP41229 1560 aa24.13■■□□□ 1.45
RN7SL560P-201ENST00000577943 C9orf84Q5VXU9 1444 aa24.13■■□□□ 1.45
RN7SL560P-201ENST00000577943 AFAP1Q8N556 730 aa24.13■■□□□ 1.45
RN7SL560P-201ENST00000577943 PLPPR3Q6T4P5 718 aa24.1■■□□□ 1.45
RN7SL560P-201ENST00000577943 ITSN2Q9NZM3 1697 aa24.1■■□□□ 1.45
RN7SL560P-201ENST00000577943 ABCC1P33527 1531 aa24.09■■□□□ 1.45
RN7SL560P-201ENST00000577943 ARHGEF12Q9NZN5 1544 aa24.05■■□□□ 1.44
RN7SL560P-201ENST00000577943 DIP2CQ9Y2E4 1556 aa24.04■■□□□ 1.44
RN7SL560P-201ENST00000577943 TRAPPC8Q9Y2L5 1435 aa24.04■■□□□ 1.44
RN7SL560P-201ENST00000577943 LMTK3Q96Q04 1460 aa24.03■■□□□ 1.44
RN7SL560P-201ENST00000577943 MLH3Q9UHC1 1453 aa24.03■■□□□ 1.44
RN7SL560P-201ENST00000577943 ILDR1Q86SU0 546 aaPredicted RBP24.03■■□□□ 1.44
RN7SL560P-201ENST00000577943 ZNF777Q9ULD5 760 aaPredicted RBP24.03■■□□□ 1.44
RN7SL560P-201ENST00000577943 ABCA6Q8N139 1617 aa24.02■■□□□ 1.44
RN7SL560P-201ENST00000577943 MTUS2Q5JR59 1369 aa24.01■■□□□ 1.43
RN7SL560P-201ENST00000577943 CEP162Q5TB80 1403 aa24.01■■□□□ 1.43
RN7SL560P-201ENST00000577943 GPATCH8Q9UKJ3 1502 aaKnown RBP24■■□□□ 1.43
RN7SL560P-201ENST00000577943 SAMD9LQ8IVG5 1584 aa23.99■■□□□ 1.43
RN7SL560P-201ENST00000577943 KIDINS220Q9ULH0 1771 aa23.99■■□□□ 1.43
RN7SL560P-201ENST00000577943 REREQ9P2R6 1566 aa23.99■■□□□ 1.43
RN7SL560P-201ENST00000577943 SYCP2Q9BX26 1530 aa23.96■■□□□ 1.43
RN7SL560P-201ENST00000577943 CCNB3Q8WWL7 1395 aa23.96■■□□□ 1.43
RN7SL560P-201ENST00000577943 CFDP1Q9UEE9 299 aaPredicted RBP23.94■■□□□ 1.42
RN7SL560P-201ENST00000577943 HSPA2P54652 639 aa23.93■■□□□ 1.42
RN7SL560P-201ENST00000577943 SETD1BQ9UPS6 1966 aaKnown RBP23.92■■□□□ 1.42
RN7SL560P-201ENST00000577943 HNRNPMP52272 730 aaKnown RBP eCLIP23.92■■□□□ 1.42
RN7SL560P-201ENST00000577943 EHBP1L1Q8N3D4 1523 aa23.92■■□□□ 1.42
RN7SL560P-201ENST00000577943 AGLP35573 1532 aa23.91■■□□□ 1.42
RN7SL560P-201ENST00000577943 CEBPAP49715 358 aaPredicted RBP23.91■■□□□ 1.42
RN7SL560P-201ENST00000577943 PREX1Q8TCU6 1659 aa23.9■■□□□ 1.42
RN7SL560P-201ENST00000577943 PLEKHH2Q8IVE3 1493 aa23.9■■□□□ 1.42
RN7SL560P-201ENST00000577943 SPAG9O60271 1321 aaKnown RBP23.88■■□□□ 1.41
RN7SL560P-201ENST00000577943 TIAM1Q13009 1591 aa23.88■■□□□ 1.41
RN7SL560P-201ENST00000577943 KIAA1107Q9UPP5 1409 aa23.88■■□□□ 1.41
RN7SL560P-201ENST00000577943 ESF1Q9H501 851 aaKnown RBP23.87■■□□□ 1.41
RN7SL560P-201ENST00000577943 SUPT6HQ7KZ85 1726 aaKnown RBP23.86■■□□□ 1.41
RN7SL560P-201ENST00000577943 C3P01024 1663 aa23.86■■□□□ 1.41
RN7SL560P-201ENST00000577943 ATP7AQ04656 1500 aa23.84■■□□□ 1.41
RN7SL560P-201ENST00000577943 LOC105371045A0A1W2PR82 267 aa23.84■■□□□ 1.41
RN7SL560P-201ENST00000577943 INO80Q9ULG1 1556 aaPredicted RBP23.82■■□□□ 1.4
RN7SL560P-201ENST00000577943 ZNF644Q9H582 1327 aaPredicted RBP23.8■■□□□ 1.4
RN7SL560P-201ENST00000577943 UHRF1BP1Q6BDS2 1440 aa23.78■■□□□ 1.4
RN7SL560P-201ENST00000577943 CNTLNQ9NXG0 1405 aa23.77■■□□□ 1.4
RN7SL560P-201ENST00000577943 ADGBQ8N7X0 1667 aa23.76■■□□□ 1.39
RN7SL560P-201ENST00000577943 A2MP01023 1474 aa23.75■■□□□ 1.39
RN7SL560P-201ENST00000577943 NCOA2Q15596 1464 aa23.75■■□□□ 1.39
RN7SL560P-201ENST00000577943 VPS8Q8N3P4 1428 aa23.75■■□□□ 1.39
RN7SL560P-201ENST00000577943 PLXNC1O60486 1568 aa23.74■■□□□ 1.39
RN7SL560P-201ENST00000577943 MROH2AA6NES4 1674 aa23.74■■□□□ 1.39
RN7SL560P-201ENST00000577943 FBXO41Q8TF61 875 aa23.74■■□□□ 1.39
RN7SL560P-201ENST00000577943 MBD5Q9P267 1494 aa23.74■■□□□ 1.39
RN7SL560P-201ENST00000577943 STRCQ7RTU9 1775 aa23.7■■□□□ 1.39
RN7SL560P-201ENST00000577943 CLTCQ00610 1675 aaKnown RBP23.7■■□□□ 1.39
RN7SL560P-201ENST00000577943 CAMSAP2Q08AD1 1489 aa23.68■■□□□ 1.38
RN7SL560P-201ENST00000577943 RTEL1-TNFRSF6BF6WH68 1400 aa23.68■■□□□ 1.38
RN7SL560P-201ENST00000577943 GGT6Q6P531 493 aa23.68■■□□□ 1.38
RN7SL560P-201ENST00000577943 LRRC9Q6ZRR7 1453 aa23.67■■□□□ 1.38
RN7SL560P-201ENST00000577943 ZMYM3Q14202 1370 aa23.66■■□□□ 1.38
RN7SL560P-201ENST00000577943 CCDC141Q6ZP82 1450 aa23.66■■□□□ 1.38
RN7SL560P-201ENST00000577943 RSPH4AQ5TD94 716 aa23.64■■□□□ 1.37
RN7SL560P-201ENST00000577943 DMRT2Q9Y5R5 561 aa23.64■■□□□ 1.37
RN7SL560P-201ENST00000577943 NPATQ14207 1427 aa23.63■■□□□ 1.37
RN7SL560P-201ENST00000577943 DHX29Q7Z478 1369 aaKnown RBP23.61■■□□□ 1.37
RN7SL560P-201ENST00000577943 MAP3K1Q13233 1512 aa23.6■■□□□ 1.37
RN7SL560P-201ENST00000577943 PPP6R1Q9UPN7 881 aa23.6■■□□□ 1.37
RN7SL560P-201ENST00000577943 ARHGEF5Q12774 1597 aa23.6■■□□□ 1.37
RN7SL560P-201ENST00000577943 KANK4Q5T7N3 995 aaPredicted RBP23.58■■□□□ 1.37
RN7SL560P-201ENST00000577943 CERKQ8TCT0 537 aa23.58■■□□□ 1.37
RN7SL560P-201ENST00000577943 TSPY4P0CV99 314 aa23.57■■□□□ 1.36
RN7SL560P-201ENST00000577943 TSPY10P0CW01 314 aa23.57■■□□□ 1.36
RN7SL560P-201ENST00000577943 KIF3BO15066 747 aa23.55■■□□□ 1.36
RN7SL560P-201ENST00000577943 MYO3AQ8NEV4 1616 aa23.54■■□□□ 1.36
RN7SL560P-201ENST00000577943 PTPRKQ15262 1439 aa23.53■■□□□ 1.36
RN7SL560P-201ENST00000577943 CAMSAP1Q5T5Y3 1602 aa23.53■■□□□ 1.36
RN7SL560P-201ENST00000577943 ZNF142P52746 1687 aaPredicted RBP23.53■■□□□ 1.36
RN7SL560P-201ENST00000577943 PTPRTO14522 1441 aa23.52■■□□□ 1.36
RN7SL560P-201ENST00000577943 NCOA1Q15788 1441 aa23.52■■□□□ 1.36
RN7SL560P-201ENST00000577943 APLP2Q06481 763 aa23.51■■□□□ 1.35
RN7SL560P-201ENST00000577943 MYOM3Q5VTT5 1437 aa23.5■■□□□ 1.35
RN7SL560P-201ENST00000577943 MIA2Q96PC5 1412 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms