RNA–Protein interactions for RNA: ENST00000577926.1

CACNB1-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 427 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-208ENST00000577926 MTUS2Q5JR59 1369 aa16.69■□□□□ 0.26
CACNB1-208ENST00000577926 RAPGEF3O95398 923 aa16.69■□□□□ 0.26
CACNB1-208ENST00000577926 TIAM1Q13009 1591 aa16.68■□□□□ 0.26
CACNB1-208ENST00000577926 ARHGEF40Q8TER5 1519 aa16.66■□□□□ 0.26
CACNB1-208ENST00000577926 EFCAB2Q5VUJ9 269 aa16.66■□□□□ 0.26
CACNB1-208ENST00000577926 ZMYM4Q5VZL5 1548 aa16.65■□□□□ 0.26
CACNB1-208ENST00000577926 POGZQ7Z3K3 1410 aa16.65■□□□□ 0.26
CACNB1-208ENST00000577926 SCAPERQ9BY12 1400 aa16.64■□□□□ 0.25
CACNB1-208ENST00000577926 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
CACNB1-208ENST00000577926 ITSN2Q9NZM3 1697 aa16.64■□□□□ 0.25
CACNB1-208ENST00000577926 SUPT6HQ7KZ85 1726 aaKnown RBP16.64■□□□□ 0.25
CACNB1-208ENST00000577926 ABCC1P33527 1531 aa16.63■□□□□ 0.25
CACNB1-208ENST00000577926 ZFYVE16Q7Z3T8 1539 aa16.61■□□□□ 0.25
CACNB1-208ENST00000577926 GPATCH8Q9UKJ3 1502 aaKnown RBP16.61■□□□□ 0.25
CACNB1-208ENST00000577926 SAMD9LQ8IVG5 1584 aa16.6■□□□□ 0.25
CACNB1-208ENST00000577926 CCNB3Q8WWL7 1395 aa16.6■□□□□ 0.25
CACNB1-208ENST00000577926 ZNF518AQ6AHZ1 1483 aa16.59■□□□□ 0.25
CACNB1-208ENST00000577926 KDM5CP41229 1560 aa16.59■□□□□ 0.25
CACNB1-208ENST00000577926 KDM4FA0A1W2PPD8 638 aa16.58■□□□□ 0.24
CACNB1-208ENST00000577926 MAGI2Q86UL8 1455 aa16.58■□□□□ 0.24
CACNB1-208ENST00000577926 MAP3K1Q13233 1512 aa16.58■□□□□ 0.24
CACNB1-208ENST00000577926 HECW2Q9P2P5 1572 aa16.57■□□□□ 0.24
CACNB1-208ENST00000577926 LRRC9Q6ZRR7 1453 aa16.57■□□□□ 0.24
CACNB1-208ENST00000577926 SYCP2Q9BX26 1530 aa16.56■□□□□ 0.24
CACNB1-208ENST00000577926 NCOA2Q15596 1464 aa16.56■□□□□ 0.24
CACNB1-208ENST00000577926 ARHGEF12Q9NZN5 1544 aa16.55■□□□□ 0.24
CACNB1-208ENST00000577926 YEATS2Q9ULM3 1422 aa16.55■□□□□ 0.24
CACNB1-208ENST00000577926 ZNF777Q9ULD5 760 aaPredicted RBP16.55■□□□□ 0.24
CACNB1-208ENST00000577926 CFDP1Q9UEE9 299 aaPredicted RBP16.54■□□□□ 0.24
CACNB1-208ENST00000577926 SIGLEC1Q9BZZ2 1709 aa16.53■□□□□ 0.24
CACNB1-208ENST00000577926 BCORL1Q5H9F3 1711 aa16.53■□□□□ 0.24
CACNB1-208ENST00000577926 TRAPPC8Q9Y2L5 1435 aa16.53■□□□□ 0.24
CACNB1-208ENST00000577926 PLEKHH2Q8IVE3 1493 aa16.52■□□□□ 0.23
CACNB1-208ENST00000577926 AFAP1Q8N556 730 aa16.51■□□□□ 0.23
CACNB1-208ENST00000577926 ABCA6Q8N139 1617 aa16.51■□□□□ 0.23
CACNB1-208ENST00000577926 DIP2CQ9Y2E4 1556 aa16.51■□□□□ 0.23
CACNB1-208ENST00000577926 APLP2Q06481 763 aa16.5■□□□□ 0.23
CACNB1-208ENST00000577926 ADAMTSL3P82987 1691 aa16.5■□□□□ 0.23
CACNB1-208ENST00000577926 ARID4BQ4LE39 1312 aaPredicted RBP16.49■□□□□ 0.23
CACNB1-208ENST00000577926 KIDINS220Q9ULH0 1771 aa16.49■□□□□ 0.23
CACNB1-208ENST00000577926 C9orf84Q5VXU9 1444 aa16.49■□□□□ 0.23
CACNB1-208ENST00000577926 MYT1LQ9UL68 1186 aa16.49■□□□□ 0.23
CACNB1-208ENST00000577926 MLH3Q9UHC1 1453 aa16.48■□□□□ 0.23
CACNB1-208ENST00000577926 KIAA1107Q9UPP5 1409 aa16.48■□□□□ 0.23
CACNB1-208ENST00000577926 KANK4Q5T7N3 995 aaPredicted RBP16.48■□□□□ 0.23
CACNB1-208ENST00000577926 MADDQ8WXG6 1647 aa16.48■□□□□ 0.23
CACNB1-208ENST00000577926 ATP10AO60312 1499 aa16.48■□□□□ 0.23
CACNB1-208ENST00000577926 CAMSAP2Q08AD1 1489 aa16.47■□□□□ 0.23
CACNB1-208ENST00000577926 INO80Q9ULG1 1556 aaPredicted RBP16.46■□□□□ 0.23
CACNB1-208ENST00000577926 HNRNPMP52272 730 aaKnown RBP eCLIP16.45■□□□□ 0.22
CACNB1-208ENST00000577926 REREQ9P2R6 1566 aa16.45■□□□□ 0.22
CACNB1-208ENST00000577926 ATP7AQ04656 1500 aa16.45■□□□□ 0.22
CACNB1-208ENST00000577926 ZNF644Q9H582 1327 aaPredicted RBP16.45■□□□□ 0.22
CACNB1-208ENST00000577926 FER1L4A9Z1Z3 1794 aa16.44■□□□□ 0.22
CACNB1-208ENST00000577926 RIMS1Q86UR5 1692 aaKnown RBP16.44■□□□□ 0.22
CACNB1-208ENST00000577926 MYOM3Q5VTT5 1437 aa16.42■□□□□ 0.22
CACNB1-208ENST00000577926 SPAG9O60271 1321 aaKnown RBP16.42■□□□□ 0.22
CACNB1-208ENST00000577926 MBD5Q9P267 1494 aa16.42■□□□□ 0.22
CACNB1-208ENST00000577926 CCDC141Q6ZP82 1450 aa16.4■□□□□ 0.22
CACNB1-208ENST00000577926 ADGBQ8N7X0 1667 aa16.4■□□□□ 0.22
CACNB1-208ENST00000577926 ARHGEF5Q12774 1597 aa16.39■□□□□ 0.21
CACNB1-208ENST00000577926 PTPRMP28827 1452 aa16.39■□□□□ 0.21
CACNB1-208ENST00000577926 MLECQ14165 292 aa16.38■□□□□ 0.21
CACNB1-208ENST00000577926 MIA2Q96PC5 1412 aa16.37■□□□□ 0.21
CACNB1-208ENST00000577926 AGLP35573 1532 aa16.37■□□□□ 0.21
CACNB1-208ENST00000577926 PTPN23Q9H3S7 1636 aa16.37■□□□□ 0.21
CACNB1-208ENST00000577926 PLXNC1O60486 1568 aa16.35■□□□□ 0.21
CACNB1-208ENST00000577926 A2MP01023 1474 aa16.34■□□□□ 0.21
CACNB1-208ENST00000577926 CROCC2H7BZ55 1655 aa16.33■□□□□ 0.2
CACNB1-208ENST00000577926 RTEL1-TNFRSF6BF6WH68 1400 aa16.32■□□□□ 0.2
CACNB1-208ENST00000577926 MAST1Q9Y2H9 1570 aa16.31■□□□□ 0.2
CACNB1-208ENST00000577926 FGD6Q6ZV73 1430 aa16.31■□□□□ 0.2
CACNB1-208ENST00000577926 RSPH4AQ5TD94 716 aa16.31■□□□□ 0.2
CACNB1-208ENST00000577926 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
CACNB1-208ENST00000577926 TCOF1Q13428 1488 aaKnown RBP16.28■□□□□ 0.2
CACNB1-208ENST00000577926 DNMT1P26358 1616 aaKnown RBP16.27■□□□□ 0.2
CACNB1-208ENST00000577926 TSPY4P0CV99 314 aa16.27■□□□□ 0.2
CACNB1-208ENST00000577926 TSPY10P0CW01 314 aa16.27■□□□□ 0.2
CACNB1-208ENST00000577926 C3P01024 1663 aa16.26■□□□□ 0.19
CACNB1-208ENST00000577926 CLTCQ00610 1675 aaKnown RBP16.25■□□□□ 0.19
CACNB1-208ENST00000577926 SHANK2Q9UPX8 1470 aa16.25■□□□□ 0.19
CACNB1-208ENST00000577926 MROH2AA6NES4 1674 aa16.24■□□□□ 0.19
CACNB1-208ENST00000577926 ESF1Q9H501 851 aaKnown RBP16.24■□□□□ 0.19
CACNB1-208ENST00000577926 DAPK1P53355 1430 aa16.23■□□□□ 0.19
CACNB1-208ENST00000577926 DHX29Q7Z478 1369 aaKnown RBP16.23■□□□□ 0.19
CACNB1-208ENST00000577926 ABCC5O15440 1437 aa16.22■□□□□ 0.19
CACNB1-208ENST00000577926 CNTLNQ9NXG0 1405 aa16.22■□□□□ 0.19
CACNB1-208ENST00000577926 PREX1Q8TCU6 1659 aa16.21■□□□□ 0.19
CACNB1-208ENST00000577926 EIF2AK4Q9P2K8 1649 aaKnown RBP16.21■□□□□ 0.19
CACNB1-208ENST00000577926 PPARGC1BQ86YN6 1023 aaKnown RBP16.2■□□□□ 0.18
CACNB1-208ENST00000577926 LMTK3Q96Q04 1460 aa16.19■□□□□ 0.18
CACNB1-208ENST00000577926 GGT6Q6P531 493 aa16.19■□□□□ 0.18
CACNB1-208ENST00000577926 CEBPAP49715 358 aaPredicted RBP16.18■□□□□ 0.18
CACNB1-208ENST00000577926 RNF17Q9BXT8 1623 aaKnown RBP16.18■□□□□ 0.18
CACNB1-208ENST00000577926 DUOX2Q9NRD8 1548 aa16.18■□□□□ 0.18
CACNB1-208ENST00000577926 FAM50AQ14320 339 aaKnown RBP16.17■□□□□ 0.18
CACNB1-208ENST00000577926 KIF15Q9NS87 1388 aa16.16■□□□□ 0.18
CACNB1-208ENST00000577926 KIF3BO15066 747 aa16.16■□□□□ 0.18
CACNB1-208ENST00000577926 KDM5DQ9BY66 1539 aa16.15■□□□□ 0.18
CACNB1-208ENST00000577926 FAM135AQ9P2D6 1515 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms