RNA–Protein interactions for RNA: ENST00000577549.1

DHX40-204, Transcript of DEAH-box helicase 40, humanhuman

TSL 2

Gene DHX40, Length 2,654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-204ENST00000577549 CHADLQ6NUI6 762 aa7.53□□□□□ -1.2
DHX40-204ENST00000577549 MS4A4AQ96JQ5 239 aa7.53□□□□□ -1.2
DHX40-204ENST00000577549 NLRP6P59044 892 aa7.53□□□□□ -1.2
DHX40-204ENST00000577549 CAMK2BQ13554 666 aa7.52□□□□□ -1.21
DHX40-204ENST00000577549 ONECUT3O60422 494 aaPredicted RBP7.52□□□□□ -1.21
DHX40-204ENST00000577549 IFNL1Q8IU54 200 aa7.52□□□□□ -1.21
DHX40-204ENST00000577549 REM2Q8IYK8 340 aaPredicted RBP7.52□□□□□ -1.21
DHX40-204ENST00000577549 CCDC9Q9Y3X0 531 aaKnown RBP7.52□□□□□ -1.21
DHX40-204ENST00000577549 PDE4AP27815 886 aa7.51□□□□□ -1.21
DHX40-204ENST00000577549 GPR37O15354 613 aa7.51□□□□□ -1.21
DHX40-204ENST00000577549 ZBTB7CA1YPR0 619 aa7.5□□□□□ -1.21
DHX40-204ENST00000577549 CCDC61Q9Y6R9 512 aa7.5□□□□□ -1.21
DHX40-204ENST00000577549 ZNF579Q8NAF0 562 aaKnown RBP7.48□□□□□ -1.21
DHX40-204ENST00000577549 AKT1S1Q96B36 256 aa7.48□□□□□ -1.21
DHX40-204ENST00000577549 DPYSL4O14531 572 aa7.47□□□□□ -1.21
DHX40-204ENST00000577549 SOX12O15370 315 aa7.47□□□□□ -1.21
DHX40-204ENST00000577549 PARP9Q8IXQ6 854 aa7.47□□□□□ -1.21
DHX40-204ENST00000577549 CCDC180Q9P1Z9 1646 aa7.47□□□□□ -1.21
DHX40-204ENST00000577549 EMILIN3Q9NT22 766 aa7.46□□□□□ -1.22
DHX40-204ENST00000577549 PITPNM1O00562 1244 aa7.45□□□□□ -1.22
DHX40-204ENST00000577549 TRAK2O60296 914 aa7.45□□□□□ -1.22
DHX40-204ENST00000577549 FLIIQ13045 1269 aa7.45□□□□□ -1.22
DHX40-204ENST00000577549 CCDC102AQ96A19 550 aa7.45□□□□□ -1.22
DHX40-204ENST00000577549 ABCC9O60706 1549 aa7.45□□□□□ -1.22
DHX40-204ENST00000577549 FECHP22830 423 aa7.44□□□□□ -1.22
DHX40-204ENST00000577549 MAP3K13O43283 966 aa7.44□□□□□ -1.22
DHX40-204ENST00000577549 ZNF777Q9ULD5 760 aaPredicted RBP7.43□□□□□ -1.22
DHX40-204ENST00000577549 DDRGK1Q96HY6 314 aa7.43□□□□□ -1.22
DHX40-204ENST00000577549 A6NJR5 290 aa7.42□□□□□ -1.22
DHX40-204ENST00000577549 KCTD17Q8N5Z5 321 aa7.41□□□□□ -1.22
DHX40-204ENST00000577549 POM121Q96HA1 1249 aa7.41□□□□□ -1.22
DHX40-204ENST00000577549 FARP1Q9Y4F1 1045 aaPredicted RBP7.41□□□□□ -1.22
DHX40-204ENST00000577549 PPP1R15BQ5SWA1 713 aa7.4□□□□□ -1.22
DHX40-204ENST00000577549 IRF6O14896 467 aa7.4□□□□□ -1.23
DHX40-204ENST00000577549 AMHR2Q16671 573 aa7.39□□□□□ -1.23
DHX40-204ENST00000577549 MINK1Q8N4C8 1332 aaPredicted RBP7.38□□□□□ -1.23
DHX40-204ENST00000577549 PDIA6Q15084 440 aa7.38□□□□□ -1.23
DHX40-204ENST00000577549 AEBP1Q8IUX7 1158 aa7.38□□□□□ -1.23
DHX40-204ENST00000577549 REPIN1Q9BWE0 567 aaKnown RBP7.38□□□□□ -1.23
DHX40-204ENST00000577549 MS4A1P11836 297 aa7.38□□□□□ -1.23
DHX40-204ENST00000577549 MCM6Q14566 821 aa7.38□□□□□ -1.23
DHX40-204ENST00000577549 LOC105371045A0A1W2PR82 267 aa7.37□□□□□ -1.23
DHX40-204ENST00000577549 MAP2K5Q13163 448 aa7.37□□□□□ -1.23
DHX40-204ENST00000577549 ZNF428Q96B54 188 aa7.37□□□□□ -1.23
DHX40-204ENST00000577549 TRAIPQ9BWF2 469 aa7.37□□□□□ -1.23
DHX40-204ENST00000577549 NUTM2FA1L443 756 aa7.37□□□□□ -1.23
DHX40-204ENST00000577549 GRXCR2A6NFK2 248 aa7.37□□□□□ -1.23
DHX40-204ENST00000577549 KIF12Q96FN5 646 aa7.36□□□□□ -1.23
DHX40-204ENST00000577549 GOPCQ9HD26 462 aa7.36□□□□□ -1.23
DHX40-204ENST00000577549 RAD21O60216 631 aa7.36□□□□□ -1.23
DHX40-204ENST00000577549 TTLL12Q14166 644 aaPredicted RBP7.36□□□□□ -1.23
DHX40-204ENST00000577549 DSG2Q14126 1118 aa7.35□□□□□ -1.23
DHX40-204ENST00000577549 GPHNQ9NQX3 736 aaPredicted RBP7.35□□□□□ -1.23
DHX40-204ENST00000577549 RBM42Q9BTD8 480 aaKnown RBP7.34□□□□□ -1.23
DHX40-204ENST00000577549 FNBP4Q8N3X1 1017 aaPredicted RBP7.34□□□□□ -1.24
DHX40-204ENST00000577549 RGS22Q8NE09 1264 aa7.34□□□□□ -1.24
DHX40-204ENST00000577549 GIGYF2Q6Y7W6 1299 aaKnown RBP7.33□□□□□ -1.24
DHX40-204ENST00000577549 MTMR7Q9Y216 660 aa7.33□□□□□ -1.24
DHX40-204ENST00000577549 PROSER2Q86WR7 435 aaPredicted RBP7.32□□□□□ -1.24
DHX40-204ENST00000577549 RB1CC1Q8TDY2 1594 aa7.32□□□□□ -1.24
DHX40-204ENST00000577549 GNPATO15228 680 aa7.31□□□□□ -1.24
DHX40-204ENST00000577549 FOXD4L5Q5VV16 416 aaPredicted RBP7.31□□□□□ -1.24
DHX40-204ENST00000577549 RETREG2Q8NC44 543 aa7.31□□□□□ -1.24
DHX40-204ENST00000577549 FOXD4L4Q8WXT5 416 aaPredicted RBP7.31□□□□□ -1.24
DHX40-204ENST00000577549 IRF5Q13568 498 aa7.31□□□□□ -1.24
DHX40-204ENST00000577549 TRPC6Q9Y210 931 aa7.31□□□□□ -1.24
DHX40-204ENST00000577549 PRIM1P49642 420 aaKnown RBP7.3□□□□□ -1.24
DHX40-204ENST00000577549 OSBPP22059 807 aa7.3□□□□□ -1.24
DHX40-204ENST00000577549 PCMTD1Q96MG8 357 aaPredicted RBP7.3□□□□□ -1.24
DHX40-204ENST00000577549 SPDYE16A6NNV3 312 aaPredicted RBP7.29□□□□□ -1.24
DHX40-204ENST00000577549 OXER1Q8TDS5 423 aa7.29□□□□□ -1.24
DHX40-204ENST00000577549 IGSF3O75054 1194 aa7.29□□□□□ -1.24
DHX40-204ENST00000577549 PROCA1Q8NCQ7 364 aaPredicted RBP7.29□□□□□ -1.24
DHX40-204ENST00000577549 GZF1Q9H116 711 aaPredicted RBP7.27□□□□□ -1.25
DHX40-204ENST00000577549 DDX12PQ92771 950 aa7.26□□□□□ -1.25
DHX40-204ENST00000577549 CCDC97Q96F63 343 aaPredicted RBP7.26□□□□□ -1.25
DHX40-204ENST00000577549 CACNB1Q02641 598 aaPredicted RBP7.26□□□□□ -1.25
DHX40-204ENST00000577549 DPY19L2Q6NUT2 758 aa7.26□□□□□ -1.25
DHX40-204ENST00000577549 PRKAR2AP13861 404 aaKnown RBP7.25□□□□□ -1.25
DHX40-204ENST00000577549 HIC1Q14526 733 aa7.25□□□□□ -1.25
DHX40-204ENST00000577549 PHOX2BQ99453 314 aa7.25□□□□□ -1.25
DHX40-204ENST00000577549 TMEM106CQ9BVX2 250 aa7.25□□□□□ -1.25
DHX40-204ENST00000577549 SERPINA10Q9UK55 444 aa7.25□□□□□ -1.25
DHX40-204ENST00000577549 FBXO31Q5XUX0 539 aaPredicted RBP7.25□□□□□ -1.25
DHX40-204ENST00000577549 PLSCR2Q9NRY7 297 aa7.25□□□□□ -1.25
DHX40-204ENST00000577549 GOLGA2Q08379 1002 aa7.24□□□□□ -1.25
DHX40-204ENST00000577549 POLR3EQ9NVU0 708 aa7.24□□□□□ -1.25
DHX40-204ENST00000577549 MFAP1P55081 439 aaKnown RBP7.24□□□□□ -1.25
DHX40-204ENST00000577549 SH3D19Q5HYK7 790 aa7.24□□□□□ -1.25
DHX40-204ENST00000577549 TMCO4Q5TGY1 634 aa7.24□□□□□ -1.25
DHX40-204ENST00000577549 PHF12Q96QT6 1004 aa7.24□□□□□ -1.25
DHX40-204ENST00000577549 COG6Q9Y2V7 657 aa7.24□□□□□ -1.25
DHX40-204ENST00000577549 RBM25P49756 843 aaKnown RBP7.23□□□□□ -1.25
DHX40-204ENST00000577549 FOXK1P85037 733 aa7.23□□□□□ -1.25
DHX40-204ENST00000577549 SNRKQ9NRH2 765 aa7.23□□□□□ -1.25
DHX40-204ENST00000577549 FCHSD2O94868 740 aa7.22□□□□□ -1.25
DHX40-204ENST00000577549 PTGDRQ13258 359 aa7.22□□□□□ -1.25
DHX40-204ENST00000577549 NLRP7Q8WX94 980 aa7.22□□□□□ -1.25
DHX40-204ENST00000577549 PLPP6Q8IY26 295 aa7.22□□□□□ -1.25
DHX40-204ENST00000577549 UPF1Q92900 1129 aaKnown RBP eCLIP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms