RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 VSIG10Q8N0Z9 540 aa6.12□□□□□ -1.43
COPS3-213ENST00000577210 MARVELD3Q96A59 401 aa6.12□□□□□ -1.43
COPS3-213ENST00000577210 PHF8Q9UPP1 1060 aa6.11□□□□□ -1.43
COPS3-213ENST00000577210 G3V3G9 751 aa6.1□□□□□ -1.43
COPS3-213ENST00000577210 SNPHO15079 494 aa6.1□□□□□ -1.43
COPS3-213ENST00000577210 TMEM121BQ9BXQ6 578 aaPredicted RBP6.1□□□□□ -1.43
COPS3-213ENST00000577210 MICALL2Q8IY33 904 aa6.09□□□□□ -1.43
COPS3-213ENST00000577210 SOX12O15370 315 aa6.08□□□□□ -1.44
COPS3-213ENST00000577210 HOXB3P14651 431 aaPredicted RBP6.08□□□□□ -1.44
COPS3-213ENST00000577210 TMEM92Q6UXU6 159 aa6.08□□□□□ -1.44
COPS3-213ENST00000577210 FBXO22Q8NEZ5 403 aa6.06□□□□□ -1.44
COPS3-213ENST00000577210 POTEB3A0JP26 581 aa6.05□□□□□ -1.44
COPS3-213ENST00000577210 EMP3P54852 163 aa6.05□□□□□ -1.44
COPS3-213ENST00000577210 POTEBQ6S5H4 581 aa6.05□□□□□ -1.44
COPS3-213ENST00000577210 MFRPQ9BY79 579 aa6.05□□□□□ -1.44
COPS3-213ENST00000577210 GTPBP6O43824 516 aaPredicted RBP6.04□□□□□ -1.44
COPS3-213ENST00000577210 NLRP6P59044 892 aa6.04□□□□□ -1.44
COPS3-213ENST00000577210 NKX1-1Q15270 411 aaPredicted RBP6.02□□□□□ -1.45
COPS3-213ENST00000577210 FAM205CA6NFA0 338 aa6.01□□□□□ -1.45
COPS3-213ENST00000577210 HS3ST6Q96QI5 342 aa6.01□□□□□ -1.45
COPS3-213ENST00000577210 HOXB1P14653 301 aaPredicted RBP5.99□□□□□ -1.45
COPS3-213ENST00000577210 DOK7Q18PE1 504 aa5.99□□□□□ -1.45
COPS3-213ENST00000577210 ZNF710Q8N1W2 664 aa5.99□□□□□ -1.45
COPS3-213ENST00000577210 KRTAP3-3Q9BYR6 98 aa5.98□□□□□ -1.45
COPS3-213ENST00000577210 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
COPS3-213ENST00000577210 PPP1R37O75864 691 aa5.96□□□□□ -1.46
COPS3-213ENST00000577210 BCANQ96GW7 911 aa5.96□□□□□ -1.46
COPS3-213ENST00000577210 TSHZ2Q9NRE2 1034 aa5.96□□□□□ -1.46
COPS3-213ENST00000577210 C2orf72A6NCS6 295 aa5.94□□□□□ -1.46
COPS3-213ENST00000577210 KIF3CO14782 793 aa5.94□□□□□ -1.46
COPS3-213ENST00000577210 RIMBP2O15034 1052 aa5.94□□□□□ -1.46
COPS3-213ENST00000577210 GPR153Q6NV75 609 aa5.94□□□□□ -1.46
COPS3-213ENST00000577210 KHSRPQ92945 711 aaKnown RBP eCLIP5.94□□□□□ -1.463e-8■■■■■ 29
COPS3-213ENST00000577210 WDR70Q9NW82 654 aa5.94□□□□□ -1.46
COPS3-213ENST00000577210 ERBB3P21860 1342 aa5.94□□□□□ -1.46
COPS3-213ENST00000577210 VARS2Q5ST30 1063 aaKnown RBP5.93□□□□□ -1.46
COPS3-213ENST00000577210 P3H3Q8IVL6 736 aa5.93□□□□□ -1.46
COPS3-213ENST00000577210 ARSIQ5FYB1 569 aa5.92□□□□□ -1.46
COPS3-213ENST00000577210 ZSWIM6Q9HCJ5 1215 aa5.92□□□□□ -1.46
COPS3-213ENST00000577210 KDM2AQ9Y2K7 1162 aa5.9□□□□□ -1.46
COPS3-213ENST00000577210 PDE4AP27815 886 aa5.89□□□□□ -1.47
COPS3-213ENST00000577210 NBR1Q14596 966 aa5.89□□□□□ -1.47
COPS3-213ENST00000577210 TMC2Q8TDI7 906 aa5.88□□□□□ -1.47
COPS3-213ENST00000577210 ZNF316A6NFI3 1004 aaPredicted RBP5.86□□□□□ -1.47
COPS3-213ENST00000577210 NUDT7P0C024 238 aa5.86□□□□□ -1.47
COPS3-213ENST00000577210 ZNF687Q8N1G0 1237 aa5.85□□□□□ -1.47
COPS3-213ENST00000577210 PCDHGA4Q9Y5G9 962 aa5.85□□□□□ -1.47
COPS3-213ENST00000577210 TULP1O00294 542 aaPredicted RBP5.83□□□□□ -1.48
COPS3-213ENST00000577210 SLC34A2O95436 690 aa5.83□□□□□ -1.48
COPS3-213ENST00000577210 LHX6Q9UPM6 363 aa5.83□□□□□ -1.48
COPS3-213ENST00000577210 DSG2Q14126 1118 aa5.82□□□□□ -1.48
COPS3-213ENST00000577210 DDX27Q96GQ7 796 aaKnown RBP5.82□□□□□ -1.48
COPS3-213ENST00000577210 FOXK1P85037 733 aa5.81□□□□□ -1.48
COPS3-213ENST00000577210 E2F4Q16254 413 aa5.81□□□□□ -1.48
COPS3-213ENST00000577210 PLPP6Q8IY26 295 aa5.81□□□□□ -1.48
COPS3-213ENST00000577210 ARHGEF1Q92888 912 aaKnown RBP5.81□□□□□ -1.48
COPS3-213ENST00000577210 RNF166Q96A37 237 aaPredicted RBP5.81□□□□□ -1.48
COPS3-213ENST00000577210 GPHNQ9NQX3 736 aaPredicted RBP5.81□□□□□ -1.48
COPS3-213ENST00000577210 MFSD10Q14728 455 aa5.8□□□□□ -1.48
COPS3-213ENST00000577210 POTEEQ6S8J3 1075 aa5.8□□□□□ -1.48
COPS3-213ENST00000577210 CADPS2Q86UW7 1296 aa5.8□□□□□ -1.48
COPS3-213ENST00000577210 LARP6Q9BRS8 491 aaKnown RBP5.8□□□□□ -1.48
COPS3-213ENST00000577210 CRISPLD2Q9H0B8 497 aa5.8□□□□□ -1.48
COPS3-213ENST00000577210 KDM4FA0A1W2PPD8 638 aa5.79□□□□□ -1.48
COPS3-213ENST00000577210 AXIN2Q9Y2T1 843 aa5.79□□□□□ -1.48
COPS3-213ENST00000577210 LSM11P83369 360 aaKnown RBP eCLIP5.78□□□□□ -1.48
COPS3-213ENST00000577210 ANKRD13DQ6ZTN6 518 aa5.78□□□□□ -1.48
COPS3-213ENST00000577210 PTCD2Q8WV60 388 aaKnown RBP5.78□□□□□ -1.48
COPS3-213ENST00000577210 NCKAP5LQ9HCH0 1330 aa5.77□□□□□ -1.49
COPS3-213ENST00000577210 MYT1LQ9UL68 1186 aa5.77□□□□□ -1.49
COPS3-213ENST00000577210 SMYD5Q6GMV2 418 aa5.76□□□□□ -1.49
COPS3-213ENST00000577210 UPF1Q92900 1129 aaKnown RBP eCLIP5.76□□□□□ -1.49
COPS3-213ENST00000577210 ARIH1Q9Y4X5 557 aaPredicted RBP5.76□□□□□ -1.49
COPS3-213ENST00000577210 PPP1R15BQ5SWA1 713 aa5.75□□□□□ -1.49
COPS3-213ENST00000577210 PBX2P40425 430 aa5.74□□□□□ -1.49
COPS3-213ENST00000577210 CAMK2BQ13554 666 aa5.74□□□□□ -1.49
COPS3-213ENST00000577210 KCNV2Q8TDN2 545 aa5.74□□□□□ -1.49
COPS3-213ENST00000577210 OXER1Q8TDS5 423 aa5.74□□□□□ -1.49
COPS3-213ENST00000577210 SPDYE16A6NNV3 312 aaPredicted RBP5.72□□□□□ -1.49
COPS3-213ENST00000577210 PSEN2P49810 448 aa5.72□□□□□ -1.49
COPS3-213ENST00000577210 DMRTA1Q5VZB9 504 aa5.72□□□□□ -1.49
COPS3-213ENST00000577210 TBC1D12O60347 775 aa5.71□□□□□ -1.5
COPS3-213ENST00000577210 PTGER2P43116 358 aa5.71□□□□□ -1.5
COPS3-213ENST00000577210 PSDA5PKW4 1024 aaPredicted RBP5.7□□□□□ -1.5
COPS3-213ENST00000577210 ARHGAP33O14559 1287 aa5.7□□□□□ -1.5
COPS3-213ENST00000577210 PPP4R3BQ5MIZ7 849 aa5.7□□□□□ -1.5
COPS3-213ENST00000577210 ADGRD1Q6QNK2 874 aa5.7□□□□□ -1.5
COPS3-213ENST00000577210 KCNK17Q96T54 332 aa5.69□□□□□ -1.5
COPS3-213ENST00000577210 ZNF454Q8N9F8 522 aa5.68□□□□□ -1.5
COPS3-213ENST00000577210 MAP3K9P80192 1104 aa5.67□□□□□ -1.5
COPS3-213ENST00000577210 EMILIN3Q9NT22 766 aa5.67□□□□□ -1.5
COPS3-213ENST00000577210 HRO43593 1189 aa5.66□□□□□ -1.5
COPS3-213ENST00000577210 TESPA1A2RU30 521 aaPredicted RBP5.65□□□□□ -1.5
COPS3-213ENST00000577210 EVI5O60447 810 aa5.65□□□□□ -1.5
COPS3-213ENST00000577210 FOSBP53539 338 aa5.65□□□□□ -1.5
COPS3-213ENST00000577210 PDIA6Q15084 440 aa5.65□□□□□ -1.5
COPS3-213ENST00000577210 TK2O00142 265 aa5.64□□□□□ -1.51
COPS3-213ENST00000577210 TPRNQ4KMQ1 711 aa5.63□□□□□ -1.51
COPS3-213ENST00000577210 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.63□□□□□ -1.51
COPS3-213ENST00000577210 JPH4Q96JJ6 628 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms