RNA–Protein interactions for RNA: ENST00000576878.1

SRRM2-228, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 2

Gene SRRM2, Length 1,141 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-228ENST00000576878 COL17A1Q9UMD9 1497 aaPredicted RBP27.44■■□□□ 1.98
SRRM2-228ENST00000576878 AKNAQ7Z591 1439 aa27.41■■□□□ 1.98
SRRM2-228ENST00000576878 ITSN2Q9NZM3 1697 aa27.4■■□□□ 1.98
SRRM2-228ENST00000576878 NCOA2Q15596 1464 aa27.4■■□□□ 1.98
SRRM2-228ENST00000576878 CCNB3Q8WWL7 1395 aa27.39■■□□□ 1.98
SRRM2-228ENST00000576878 KANK4Q5T7N3 995 aaPredicted RBP27.39■■□□□ 1.98
SRRM2-228ENST00000576878 GPATCH8Q9UKJ3 1502 aaKnown RBP27.39■■□□□ 1.98
SRRM2-228ENST00000576878 EFCAB2Q5VUJ9 269 aa27.37■■□□□ 1.97
SRRM2-228ENST00000576878 ADGRL1O94910 1474 aa27.35■■□□□ 1.97
SRRM2-228ENST00000576878 FRMPD1Q5SYB0 1578 aa27.33■■□□□ 1.97
SRRM2-228ENST00000576878 RICTORQ6R327 1708 aa27.32■■□□□ 1.96
SRRM2-228ENST00000576878 DENND4BO75064 1496 aaPredicted RBP27.32■■□□□ 1.96
SRRM2-228ENST00000576878 ABCC1P33527 1531 aa27.31■■□□□ 1.96
SRRM2-228ENST00000576878 SAMD9LQ8IVG5 1584 aa27.3■■□□□ 1.96
SRRM2-228ENST00000576878 SCAPERQ9BY12 1400 aa27.28■■□□□ 1.96
SRRM2-228ENST00000576878 CFDP1Q9UEE9 299 aaPredicted RBP27.26■■□□□ 1.95
SRRM2-228ENST00000576878 POGZQ7Z3K3 1410 aa27.25■■□□□ 1.95
SRRM2-228ENST00000576878 RAPGEF3O95398 923 aa27.24■■□□□ 1.95
SRRM2-228ENST00000576878 ZMYM4Q5VZL5 1548 aa27.22■■□□□ 1.95
SRRM2-228ENST00000576878 PLEKHH2Q8IVE3 1493 aa27.22■■□□□ 1.95
SRRM2-228ENST00000576878 SYCP2Q9BX26 1530 aa27.21■■□□□ 1.95
SRRM2-228ENST00000576878 ZNF777Q9ULD5 760 aaPredicted RBP27.21■■□□□ 1.95
SRRM2-228ENST00000576878 MYOM3Q5VTT5 1437 aa27.21■■□□□ 1.95
SRRM2-228ENST00000576878 ARHGEF12Q9NZN5 1544 aa27.21■■□□□ 1.95
SRRM2-228ENST00000576878 ZNF518AQ6AHZ1 1483 aa27.2■■□□□ 1.95
SRRM2-228ENST00000576878 KDM5CP41229 1560 aa27.18■■□□□ 1.94
SRRM2-228ENST00000576878 KIAA1107Q9UPP5 1409 aa27.17■■□□□ 1.94
SRRM2-228ENST00000576878 CAMSAP2Q08AD1 1489 aa27.15■■□□□ 1.94
SRRM2-228ENST00000576878 ARHGEF40Q8TER5 1519 aa27.15■■□□□ 1.94
SRRM2-228ENST00000576878 MIA2Q96PC5 1412 aa27.15■■□□□ 1.94
SRRM2-228ENST00000576878 TRAPPC8Q9Y2L5 1435 aa27.14■■□□□ 1.93
SRRM2-228ENST00000576878 ZNF644Q9H582 1327 aaPredicted RBP27.12■■□□□ 1.93
SRRM2-228ENST00000576878 MAGI2Q86UL8 1455 aa27.12■■□□□ 1.93
SRRM2-228ENST00000576878 ZFYVE16Q7Z3T8 1539 aa27.11■■□□□ 1.93
SRRM2-228ENST00000576878 HECW2Q9P2P5 1572 aa27.11■■□□□ 1.93
SRRM2-228ENST00000576878 AFAP1Q8N556 730 aa27.08■■□□□ 1.93
SRRM2-228ENST00000576878 PTPN23Q9H3S7 1636 aa27.08■■□□□ 1.93
SRRM2-228ENST00000576878 FGD6Q6ZV73 1430 aa27.07■■□□□ 1.92
SRRM2-228ENST00000576878 MBD5Q9P267 1494 aa27.07■■□□□ 1.92
SRRM2-228ENST00000576878 HNRNPMP52272 730 aaKnown RBP eCLIP27.07■■□□□ 1.92
SRRM2-228ENST00000576878 MLH3Q9UHC1 1453 aa27.05■■□□□ 1.92
SRRM2-228ENST00000576878 ARHGEF5Q12774 1597 aa27.05■■□□□ 1.92
SRRM2-228ENST00000576878 YEATS2Q9ULM3 1422 aa27.04■■□□□ 1.92
SRRM2-228ENST00000576878 CCDC141Q6ZP82 1450 aa27.03■■□□□ 1.92
SRRM2-228ENST00000576878 KIDINS220Q9ULH0 1771 aa27.02■■□□□ 1.92
SRRM2-228ENST00000576878 INO80Q9ULG1 1556 aaPredicted RBP27.02■■□□□ 1.92
SRRM2-228ENST00000576878 PPARGC1BQ86YN6 1023 aaKnown RBP27.02■■□□□ 1.92
SRRM2-228ENST00000576878 TCOF1Q13428 1488 aaKnown RBP27.01■■□□□ 1.91
SRRM2-228ENST00000576878 ABCA6Q8N139 1617 aa27.01■■□□□ 1.91
SRRM2-228ENST00000576878 DIP2CQ9Y2E4 1556 aa27■■□□□ 1.91
SRRM2-228ENST00000576878 ATP7AQ04656 1500 aa26.99■■□□□ 1.91
SRRM2-228ENST00000576878 SPAG9O60271 1321 aaKnown RBP26.97■■□□□ 1.91
SRRM2-228ENST00000576878 MYT1LQ9UL68 1186 aa26.96■■□□□ 1.91
SRRM2-228ENST00000576878 RSPH4AQ5TD94 716 aa26.95■■□□□ 1.9
SRRM2-228ENST00000576878 ATP10AO60312 1499 aa26.94■■□□□ 1.9
SRRM2-228ENST00000576878 C9orf84Q5VXU9 1444 aa26.94■■□□□ 1.9
SRRM2-228ENST00000576878 CROCC2H7BZ55 1655 aa26.94■■□□□ 1.9
SRRM2-228ENST00000576878 REREQ9P2R6 1566 aa26.92■■□□□ 1.9
SRRM2-228ENST00000576878 DNMT1P26358 1616 aaKnown RBP26.92■■□□□ 1.9
SRRM2-228ENST00000576878 SIGLEC1Q9BZZ2 1709 aa26.92■■□□□ 1.9
SRRM2-228ENST00000576878 MAST1Q9Y2H9 1570 aa26.91■■□□□ 1.9
SRRM2-228ENST00000576878 RTEL1-TNFRSF6BF6WH68 1400 aa26.9■■□□□ 1.9
SRRM2-228ENST00000576878 ADGBQ8N7X0 1667 aa26.88■■□□□ 1.89
SRRM2-228ENST00000576878 SHANK2Q9UPX8 1470 aa26.87■■□□□ 1.89
SRRM2-228ENST00000576878 DAPK1P53355 1430 aa26.86■■□□□ 1.89
SRRM2-228ENST00000576878 ABCC5O15440 1437 aa26.85■■□□□ 1.89
SRRM2-228ENST00000576878 TSPY4P0CV99 314 aa26.85■■□□□ 1.89
SRRM2-228ENST00000576878 TSPY10P0CW01 314 aa26.85■■□□□ 1.89
SRRM2-228ENST00000576878 BCORL1Q5H9F3 1711 aa26.85■■□□□ 1.89
SRRM2-228ENST00000576878 FAM50AQ14320 339 aaKnown RBP26.83■■□□□ 1.89
SRRM2-228ENST00000576878 PLXNC1O60486 1568 aa26.82■■□□□ 1.88
SRRM2-228ENST00000576878 ARID4BQ4LE39 1312 aaPredicted RBP26.82■■□□□ 1.88
SRRM2-228ENST00000576878 AGLP35573 1532 aa26.81■■□□□ 1.88
SRRM2-228ENST00000576878 A2MP01023 1474 aa26.81■■□□□ 1.88
SRRM2-228ENST00000576878 RRBP1Q9P2E9 1410 aaKnown RBP26.8■■□□□ 1.88
SRRM2-228ENST00000576878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.78■■□□□ 1.884e-6■□□□□ 11.2
SRRM2-228ENST00000576878 ADAMTSL3P82987 1691 aa26.78■■□□□ 1.88
SRRM2-228ENST00000576878 KDM4FA0A1W2PPD8 638 aa26.75■■□□□ 1.87
SRRM2-228ENST00000576878 MADDQ8WXG6 1647 aa26.72■■□□□ 1.87
SRRM2-228ENST00000576878 ADGRL2O95490 1459 aa26.71■■□□□ 1.87
SRRM2-228ENST00000576878 DHX29Q7Z478 1369 aaKnown RBP26.71■■□□□ 1.87
SRRM2-228ENST00000576878 FER1L4A9Z1Z3 1794 aa26.7■■□□□ 1.86
SRRM2-228ENST00000576878 DUOX2Q9NRD8 1548 aa26.68■■□□□ 1.86
SRRM2-228ENST00000576878 ANKRD30AQ9BXX3 1397 aa26.67■■□□□ 1.86
SRRM2-228ENST00000576878 KIF15Q9NS87 1388 aa26.67■■□□□ 1.86
SRRM2-228ENST00000576878 EIF2AK4Q9P2K8 1649 aaKnown RBP26.66■■□□□ 1.86
SRRM2-228ENST00000576878 MLECQ14165 292 aa26.66■■□□□ 1.86
SRRM2-228ENST00000576878 PTPRKQ15262 1439 aa26.65■■□□□ 1.86
SRRM2-228ENST00000576878 CHIC2Q9UKJ5 165 aa26.65■■□□□ 1.86
SRRM2-228ENST00000576878 RIMS1Q86UR5 1692 aaKnown RBP26.65■■□□□ 1.86
SRRM2-228ENST00000576878 NCOA1Q15788 1441 aa26.64■■□□□ 1.85
SRRM2-228ENST00000576878 ERBINQ96RT1 1412 aa26.6■■□□□ 1.85
SRRM2-228ENST00000576878 RRP7BPQ9NSQ0 103 aa26.6■■□□□ 1.85
SRRM2-228ENST00000576878 RNF17Q9BXT8 1623 aaKnown RBP26.59■■□□□ 1.85
SRRM2-228ENST00000576878 ROCK1Q13464 1354 aa26.58■■□□□ 1.85
SRRM2-228ENST00000576878 ITGAEP38570 1179 aa26.58■■□□□ 1.85
SRRM2-228ENST00000576878 PTPRMP28827 1452 aa26.56■■□□□ 1.84
SRRM2-228ENST00000576878 KIF3BO15066 747 aa26.56■■□□□ 1.84
SRRM2-228ENST00000576878 GGT6Q6P531 493 aa26.53■■□□□ 1.84
SRRM2-228ENST00000576878 FAM135AQ9P2D6 1515 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms