RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 CADPS2Q86UW7 1296 aa12.41□□□□□ -0.42
CDC27-219ENST00000576484 MICALL2Q8IY33 904 aa12.41□□□□□ -0.42
CDC27-219ENST00000576484 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.4□□□□□ -0.42
CDC27-219ENST00000576484 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
CDC27-219ENST00000576484 TMEM121BQ9BXQ6 578 aaPredicted RBP12.34□□□□□ -0.43
CDC27-219ENST00000576484 NCKAP5LQ9HCH0 1330 aa12.26□□□□□ -0.45
CDC27-219ENST00000576484 TMEM92Q6UXU6 159 aa12.25□□□□□ -0.45
CDC27-219ENST00000576484 CRISPLD2Q9H0B8 497 aa12.23□□□□□ -0.45
CDC27-219ENST00000576484 TMC2Q8TDI7 906 aa12.22□□□□□ -0.45
CDC27-219ENST00000576484 C2orf72A6NCS6 295 aa12.2□□□□□ -0.46
CDC27-219ENST00000576484 PDE4AP27815 886 aa12.18□□□□□ -0.46
CDC27-219ENST00000576484 LARP6Q9BRS8 491 aaKnown RBP12.18□□□□□ -0.46
CDC27-219ENST00000576484 WDR70Q9NW82 654 aa12.18□□□□□ -0.46
CDC27-219ENST00000576484 MFSD10Q14728 455 aa12.17□□□□□ -0.46
CDC27-219ENST00000576484 FAM163AQ96GL9 167 aaPredicted RBP12.17□□□□□ -0.46
CDC27-219ENST00000576484 DDX27Q96GQ7 796 aaKnown RBP12.14□□□□□ -0.47
CDC27-219ENST00000576484 GPHNQ9NQX3 736 aaPredicted RBP12.14□□□□□ -0.47
CDC27-219ENST00000576484 KIF3CO14782 793 aa12.11□□□□□ -0.47
CDC27-219ENST00000576484 SNPHO15079 494 aa12.11□□□□□ -0.47
CDC27-219ENST00000576484 KCNV2Q8TDN2 545 aa12.11□□□□□ -0.47
CDC27-219ENST00000576484 PPP1R15BQ5SWA1 713 aa12.09□□□□□ -0.47
CDC27-219ENST00000576484 DSG2Q14126 1118 aa12.08□□□□□ -0.48
CDC27-219ENST00000576484 P3H3Q8IVL6 736 aa12.08□□□□□ -0.48
CDC27-219ENST00000576484 E2F4Q16254 413 aa12.07□□□□□ -0.48
CDC27-219ENST00000576484 PLPP6Q8IY26 295 aa12.07□□□□□ -0.48
CDC27-219ENST00000576484 FOXK1P85037 733 aa12.06□□□□□ -0.48
CDC27-219ENST00000576484 ZNF710Q8N1W2 664 aa12.06□□□□□ -0.48
CDC27-219ENST00000576484 BCANQ96GW7 911 aa12.06□□□□□ -0.48
CDC27-219ENST00000576484 DOK7Q18PE1 504 aa12.05□□□□□ -0.48
CDC27-219ENST00000576484 HOXB3P14651 431 aaPredicted RBP12.04□□□□□ -0.48
CDC27-219ENST00000576484 CAMK2BQ13554 666 aa12.03□□□□□ -0.48
CDC27-219ENST00000576484 ST18O60284 1047 aa12.02□□□□□ -0.49
CDC27-219ENST00000576484 RIMBP2O15034 1052 aa12.01□□□□□ -0.49
CDC27-219ENST00000576484 NBR1Q14596 966 aa11.99□□□□□ -0.49
CDC27-219ENST00000576484 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
CDC27-219ENST00000576484 UPF1Q92900 1129 aaKnown RBP eCLIP11.97□□□□□ -0.49
CDC27-219ENST00000576484 EMILIN3Q9NT22 766 aa11.97□□□□□ -0.49
CDC27-219ENST00000576484 ARSIQ5FYB1 569 aa11.96□□□□□ -0.49
CDC27-219ENST00000576484 MARVELD3Q96A59 401 aa11.96□□□□□ -0.49
CDC27-219ENST00000576484 LCE2DQ5TA82 110 aaPredicted RBP11.95□□□□□ -0.5
CDC27-219ENST00000576484 KHSRPQ92945 711 aaKnown RBP eCLIP11.95□□□□□ -0.54e-7■□□□□ 10
CDC27-219ENST00000576484 ARIH1Q9Y4X5 557 aaPredicted RBP11.94□□□□□ -0.5
CDC27-219ENST00000576484 PCDHGA4Q9Y5G9 962 aa11.92□□□□□ -0.5
CDC27-219ENST00000576484 DPYSL4O14531 572 aa11.9□□□□□ -0.5
CDC27-219ENST00000576484 EMP3P54852 163 aa11.9□□□□□ -0.5
CDC27-219ENST00000576484 GPR153Q6NV75 609 aa11.9□□□□□ -0.5
CDC27-219ENST00000576484 SLC34A2O95436 690 aa11.89□□□□□ -0.51
CDC27-219ENST00000576484 HOXB1P14653 301 aaPredicted RBP11.89□□□□□ -0.51
CDC27-219ENST00000576484 ZSWIM6Q9HCJ5 1215 aa11.89□□□□□ -0.51
CDC27-219ENST00000576484 NUDT7P0C024 238 aa11.88□□□□□ -0.51
CDC27-219ENST00000576484 TBC1D12O60347 775 aa11.87□□□□□ -0.51
CDC27-219ENST00000576484 POTEGQ6S5H5 508 aa11.87□□□□□ -0.51
CDC27-219ENST00000576484 POTEMA6NI47 508 aa11.86□□□□□ -0.51
CDC27-219ENST00000576484 OXER1Q8TDS5 423 aa11.86□□□□□ -0.51
CDC27-219ENST00000576484 PTCD2Q8WV60 388 aaKnown RBP11.86□□□□□ -0.51
CDC27-219ENST00000576484 SEMA3EO15041 775 aa11.85□□□□□ -0.51
CDC27-219ENST00000576484 MAP3K9P80192 1104 aa11.85□□□□□ -0.51
CDC27-219ENST00000576484 FAM205CA6NFA0 338 aa11.84□□□□□ -0.51
CDC27-219ENST00000576484 PDIA6Q15084 440 aa11.83□□□□□ -0.52
CDC27-219ENST00000576484 ERBB3P21860 1342 aa11.83□□□□□ -0.52
CDC27-219ENST00000576484 TESPA1A2RU30 521 aaPredicted RBP11.8□□□□□ -0.52
CDC27-219ENST00000576484 SPDYE16A6NNV3 312 aaPredicted RBP11.78□□□□□ -0.52
CDC27-219ENST00000576484 VARS2Q5ST30 1063 aaKnown RBP11.78□□□□□ -0.52
CDC27-219ENST00000576484 LHX6Q9UPM6 363 aa11.78□□□□□ -0.52
CDC27-219ENST00000576484 EVI5O60447 810 aa11.77□□□□□ -0.53
CDC27-219ENST00000576484 ZNF316A6NFI3 1004 aaPredicted RBP11.76□□□□□ -0.53
CDC27-219ENST00000576484 HS3ST6Q96QI5 342 aa11.76□□□□□ -0.53
CDC27-219ENST00000576484 MLLT3P42568 568 aaPredicted RBP11.75□□□□□ -0.53
CDC27-219ENST00000576484 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
CDC27-219ENST00000576484 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
CDC27-219ENST00000576484 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDC27-219ENST00000576484 KDM4FA0A1W2PPD8 638 aa11.7□□□□□ -0.54
CDC27-219ENST00000576484 LMOD2Q6P5Q4 547 aa11.69□□□□□ -0.54
CDC27-219ENST00000576484 CDAN1Q8IWY9 1227 aa11.68□□□□□ -0.54
CDC27-219ENST00000576484 ZNF454Q8N9F8 522 aa11.68□□□□□ -0.54
CDC27-219ENST00000576484 TULP1O00294 542 aaPredicted RBP11.67□□□□□ -0.54
CDC27-219ENST00000576484 PTGER2P43116 358 aa11.66□□□□□ -0.54
CDC27-219ENST00000576484 TPRNQ4KMQ1 711 aa11.66□□□□□ -0.54
CDC27-219ENST00000576484 SMYD5Q6GMV2 418 aa11.66□□□□□ -0.54
CDC27-219ENST00000576484 DDX12PQ92771 950 aa11.66□□□□□ -0.54
CDC27-219ENST00000576484 ANO8Q9HCE9 1232 aaPredicted RBP11.66□□□□□ -0.54
CDC27-219ENST00000576484 GRXCR2A6NFK2 248 aa11.65□□□□□ -0.54
CDC27-219ENST00000576484 PRKCSHP14314 528 aaPredicted RBP11.65□□□□□ -0.54
CDC27-219ENST00000576484 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
CDC27-219ENST00000576484 PPP4R3BQ5MIZ7 849 aa11.63□□□□□ -0.55
CDC27-219ENST00000576484 RBM26Q5T8P6 1007 aaKnown RBP11.62□□□□□ -0.55
CDC27-219ENST00000576484 ZNF687Q8N1G0 1237 aa11.61□□□□□ -0.55
CDC27-219ENST00000576484 OSBPP22059 807 aa11.6□□□□□ -0.55
CDC27-219ENST00000576484 FOSBP53539 338 aa11.6□□□□□ -0.55
CDC27-219ENST00000576484 AXIN2Q9Y2T1 843 aa11.6□□□□□ -0.55
CDC27-219ENST00000576484 PRIM1P49642 420 aaKnown RBP11.59□□□□□ -0.55
CDC27-219ENST00000576484 JPH4Q96JJ6 628 aa11.59□□□□□ -0.55
CDC27-219ENST00000576484 PCDHGA10Q9Y5H3 936 aa11.58□□□□□ -0.56
CDC27-219ENST00000576484 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
CDC27-219ENST00000576484 PHF14O94880 888 aa11.56□□□□□ -0.56
CDC27-219ENST00000576484 ZDHHC16Q969W1 377 aa11.56□□□□□ -0.56
CDC27-219ENST00000576484 TYW1BQ6NUM6 668 aa11.54□□□□□ -0.56
CDC27-219ENST00000576484 KCNK17Q96T54 332 aa11.54□□□□□ -0.56
CDC27-219ENST00000576484 ADAM33Q9BZ11 813 aa11.54□□□□□ -0.56
CDC27-219ENST00000576484 PCDH10Q9P2E7 1040 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms