RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 ARHGAP5Q13017 1502 aa13.16□□□□□ -0.3
PRPF8-213ENST00000576407 ARAP3Q8WWN8 1544 aa13.16□□□□□ -0.3
PRPF8-213ENST00000576407 TSPOAP1O95153 1857 aa13.16□□□□□ -0.3
PRPF8-213ENST00000576407 PPRC1Q5VV67 1664 aaKnown RBP13.15□□□□□ -0.3
PRPF8-213ENST00000576407 FANCAO15360 1455 aa13.14□□□□□ -0.31
PRPF8-213ENST00000576407 MIA2Q96PC5 1412 aa13.13□□□□□ -0.31
PRPF8-213ENST00000576407 TEX14Q8IWB6 1497 aa13.13□□□□□ -0.31
PRPF8-213ENST00000576407 EFCAB2Q5VUJ9 269 aa13.13□□□□□ -0.31
PRPF8-213ENST00000576407 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
PRPF8-213ENST00000576407 ZNF777Q9ULD5 760 aaPredicted RBP13.12□□□□□ -0.31
PRPF8-213ENST00000576407 CFAP74Q9C0B2 1584 aa13.11□□□□□ -0.31
PRPF8-213ENST00000576407 NEO1Q92859 1461 aa13.11□□□□□ -0.31
PRPF8-213ENST00000576407 SAMD9LQ8IVG5 1584 aa13.11□□□□□ -0.31
PRPF8-213ENST00000576407 ZNF644Q9H582 1327 aaPredicted RBP13.11□□□□□ -0.31
PRPF8-213ENST00000576407 PTPN23Q9H3S7 1636 aa13.1□□□□□ -0.31
PRPF8-213ENST00000576407 AKNAQ7Z591 1439 aa13.09□□□□□ -0.31
PRPF8-213ENST00000576407 CAMSAP2Q08AD1 1489 aa13.09□□□□□ -0.31
PRPF8-213ENST00000576407 RRBP1Q9P2E9 1410 aaKnown RBP13.08□□□□□ -0.32
PRPF8-213ENST00000576407 TCOF1Q13428 1488 aaKnown RBP13.08□□□□□ -0.32
PRPF8-213ENST00000576407 ABCC1P33527 1531 aa13.08□□□□□ -0.32
PRPF8-213ENST00000576407 ADGRL1O94910 1474 aa13.07□□□□□ -0.32
PRPF8-213ENST00000576407 PLEKHH2Q8IVE3 1493 aa13.07□□□□□ -0.32
PRPF8-213ENST00000576407 FAM50AQ14320 339 aaKnown RBP13.06□□□□□ -0.32
PRPF8-213ENST00000576407 SYCP2Q9BX26 1530 aa13.06□□□□□ -0.32
PRPF8-213ENST00000576407 ARHGEF12Q9NZN5 1544 aa13.06□□□□□ -0.32
PRPF8-213ENST00000576407 SCAPERQ9BY12 1400 aa13.05□□□□□ -0.32
PRPF8-213ENST00000576407 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
PRPF8-213ENST00000576407 HNRNPMP52272 730 aaKnown RBP eCLIP13.05□□□□□ -0.32
PRPF8-213ENST00000576407 MBD5Q9P267 1494 aa13.04□□□□□ -0.32
PRPF8-213ENST00000576407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.03□□□□□ -0.32
PRPF8-213ENST00000576407 DENND4BO75064 1496 aaPredicted RBP13.03□□□□□ -0.32
PRPF8-213ENST00000576407 COL17A1Q9UMD9 1497 aaPredicted RBP13.03□□□□□ -0.32
PRPF8-213ENST00000576407 TRAPPC8Q9Y2L5 1435 aa13.02□□□□□ -0.33
PRPF8-213ENST00000576407 ARHGEF5Q12774 1597 aa13.02□□□□□ -0.33
PRPF8-213ENST00000576407 RAPGEF3O95398 923 aa13.01□□□□□ -0.33
PRPF8-213ENST00000576407 POGZQ7Z3K3 1410 aa13.01□□□□□ -0.33
PRPF8-213ENST00000576407 KDM6BO15054 1643 aa13□□□□□ -0.33
PRPF8-213ENST00000576407 DNMT1P26358 1616 aaKnown RBP13□□□□□ -0.33
PRPF8-213ENST00000576407 ZNF518AQ6AHZ1 1483 aa13□□□□□ -0.33
PRPF8-213ENST00000576407 CCDC141Q6ZP82 1450 aa13□□□□□ -0.33
PRPF8-213ENST00000576407 AFAP1Q8N556 730 aa13□□□□□ -0.33
PRPF8-213ENST00000576407 RICTORQ6R327 1708 aa12.99□□□□□ -0.33
PRPF8-213ENST00000576407 FRMPD1Q5SYB0 1578 aa12.99□□□□□ -0.33
PRPF8-213ENST00000576407 ABCC5O15440 1437 aa12.99□□□□□ -0.33
PRPF8-213ENST00000576407 DAPK1P53355 1430 aa12.99□□□□□ -0.33
PRPF8-213ENST00000576407 RSPH4AQ5TD94 716 aa12.99□□□□□ -0.33
PRPF8-213ENST00000576407 KDM5CP41229 1560 aa12.98□□□□□ -0.33
PRPF8-213ENST00000576407 CROCC2H7BZ55 1655 aa12.97□□□□□ -0.33
PRPF8-213ENST00000576407 ITGAEP38570 1179 aa12.97□□□□□ -0.33
PRPF8-213ENST00000576407 TSPY4P0CV99 314 aa12.96□□□□□ -0.33
PRPF8-213ENST00000576407 TSPY10P0CW01 314 aa12.96□□□□□ -0.33
PRPF8-213ENST00000576407 PTPRKQ15262 1439 aa12.96□□□□□ -0.34
PRPF8-213ENST00000576407 SPAG9O60271 1321 aaKnown RBP12.95□□□□□ -0.34
PRPF8-213ENST00000576407 ZMYM4Q5VZL5 1548 aa12.95□□□□□ -0.34
PRPF8-213ENST00000576407 TRIM26Q12899 539 aaPredicted RBP12.95□□□□□ -0.34
PRPF8-213ENST00000576407 SHANK2Q9UPX8 1470 aa12.95□□□□□ -0.34
PRPF8-213ENST00000576407 MAST1Q9Y2H9 1570 aa12.94□□□□□ -0.34
PRPF8-213ENST00000576407 MLH3Q9UHC1 1453 aa12.94□□□□□ -0.34
PRPF8-213ENST00000576407 C9orf84Q5VXU9 1444 aa12.94□□□□□ -0.34
PRPF8-213ENST00000576407 HECW2Q9P2P5 1572 aa12.94□□□□□ -0.34
PRPF8-213ENST00000576407 INO80Q9ULG1 1556 aaPredicted RBP12.94□□□□□ -0.34
PRPF8-213ENST00000576407 ZFYVE16Q7Z3T8 1539 aa12.93□□□□□ -0.34
PRPF8-213ENST00000576407 CHIC2Q9UKJ5 165 aa12.93□□□□□ -0.34
PRPF8-213ENST00000576407 RTEL1-TNFRSF6BF6WH68 1400 aa12.93□□□□□ -0.34
PRPF8-213ENST00000576407 ATP7AQ04656 1500 aa12.93□□□□□ -0.34
PRPF8-213ENST00000576407 KIDINS220Q9ULH0 1771 aa12.92□□□□□ -0.34
PRPF8-213ENST00000576407 MYT1LQ9UL68 1186 aa12.92□□□□□ -0.34
PRPF8-213ENST00000576407 MAGI2Q86UL8 1455 aa12.91□□□□□ -0.34
PRPF8-213ENST00000576407 ADGBQ8N7X0 1667 aa12.9□□□□□ -0.34
PRPF8-213ENST00000576407 ADGRL2O95490 1459 aa12.9□□□□□ -0.34
PRPF8-213ENST00000576407 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
PRPF8-213ENST00000576407 YEATS2Q9ULM3 1422 aa12.89□□□□□ -0.35
PRPF8-213ENST00000576407 ROCK1Q13464 1354 aa12.89□□□□□ -0.35
PRPF8-213ENST00000576407 ANKRD30AQ9BXX3 1397 aa12.89□□□□□ -0.35
PRPF8-213ENST00000576407 PLXNC1O60486 1568 aa12.89□□□□□ -0.35
PRPF8-213ENST00000576407 ABCA6Q8N139 1617 aa12.88□□□□□ -0.35
PRPF8-213ENST00000576407 RRP7BPQ9NSQ0 103 aa12.88□□□□□ -0.35
PRPF8-213ENST00000576407 DIP2CQ9Y2E4 1556 aa12.88□□□□□ -0.35
PRPF8-213ENST00000576407 ARHGEF40Q8TER5 1519 aa12.88□□□□□ -0.35
PRPF8-213ENST00000576407 KIF15Q9NS87 1388 aa12.86□□□□□ -0.35
PRPF8-213ENST00000576407 ATP10AO60312 1499 aa12.85□□□□□ -0.35
PRPF8-213ENST00000576407 DUOX2Q9NRD8 1548 aa12.84□□□□□ -0.35
PRPF8-213ENST00000576407 PCGF6Q9BYE7 350 aa12.84□□□□□ -0.35
PRPF8-213ENST00000576407 HFM1A2PYH4 1435 aa12.84□□□□□ -0.35
PRPF8-213ENST00000576407 A2MP01023 1474 aa12.84□□□□□ -0.35
PRPF8-213ENST00000576407 NAIPQ13075 1403 aa12.83□□□□□ -0.36
PRPF8-213ENST00000576407 GCC2Q8IWJ2 1684 aa12.83□□□□□ -0.36
PRPF8-213ENST00000576407 DHX29Q7Z478 1369 aaKnown RBP12.82□□□□□ -0.36
PRPF8-213ENST00000576407 REREQ9P2R6 1566 aa12.82□□□□□ -0.36
PRPF8-213ENST00000576407 ANKRD50Q9ULJ7 1429 aa12.81□□□□□ -0.36
PRPF8-213ENST00000576407 ERBINQ96RT1 1412 aa12.8□□□□□ -0.36
PRPF8-213ENST00000576407 SIGLEC1Q9BZZ2 1709 aa12.8□□□□□ -0.36
PRPF8-213ENST00000576407 SETD5Q9C0A6 1442 aa12.79□□□□□ -0.36
PRPF8-213ENST00000576407 PELP1Q8IZL8 1130 aaKnown RBP12.79□□□□□ -0.36
PRPF8-213ENST00000576407 EIF2AK4Q9P2K8 1649 aaKnown RBP12.78□□□□□ -0.36
PRPF8-213ENST00000576407 AGLP35573 1532 aa12.78□□□□□ -0.36
PRPF8-213ENST00000576407 KIF3BO15066 747 aa12.77□□□□□ -0.37
PRPF8-213ENST00000576407 BCORL1Q5H9F3 1711 aa12.76□□□□□ -0.37
PRPF8-213ENST00000576407 ARID4BQ4LE39 1312 aaPredicted RBP12.76□□□□□ -0.37
PRPF8-213ENST00000576407 RAB3GAP2Q9H2M9 1393 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms