RNA–Protein interactions for RNA: ENST00000576112.2

TSR1-204, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 5 BASIC

Gene TSR1, Length 1,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-204ENST00000576112 PLCH2O75038 1416 aa24.44■■□□□ 1.5
TSR1-204ENST00000576112 FER1L4A9Z1Z3 1794 aa24.44■■□□□ 1.5
TSR1-204ENST00000576112 UBTFP17480 764 aaKnown RBP24.43■■□□□ 1.5
TSR1-204ENST00000576112 MAGI2Q86UL8 1455 aa24.41■■□□□ 1.5
TSR1-204ENST00000576112 SCAPERQ9BY12 1400 aa24.41■■□□□ 1.5
TSR1-204ENST00000576112 CHIC1Q5VXU3 224 aa24.39■■□□□ 1.49
TSR1-204ENST00000576112 ATP1B4Q9UN42 357 aaPredicted RBP24.38■■□□□ 1.49
TSR1-204ENST00000576112 TROQ12816 1431 aaPredicted RBP24.35■■□□□ 1.49
TSR1-204ENST00000576112 CDC42BPBQ9Y5S2 1711 aa24.34■■□□□ 1.49
TSR1-204ENST00000576112 ARHGAP5Q13017 1502 aa24.32■■□□□ 1.48
TSR1-204ENST00000576112 KDM5CP41229 1560 aa24.32■■□□□ 1.48
TSR1-204ENST00000576112 ARHGEF12Q9NZN5 1544 aa24.31■■□□□ 1.48
TSR1-204ENST00000576112 PLPPR3Q6T4P5 718 aa24.31■■□□□ 1.48
TSR1-204ENST00000576112 C9orf84Q5VXU9 1444 aa24.29■■□□□ 1.48
TSR1-204ENST00000576112 PREX2Q70Z35 1606 aa24.29■■□□□ 1.48
TSR1-204ENST00000576112 MLECQ14165 292 aa24.29■■□□□ 1.48
TSR1-204ENST00000576112 ATP10AO60312 1499 aa24.29■■□□□ 1.48
TSR1-204ENST00000576112 ZNF518AQ6AHZ1 1483 aa24.28■■□□□ 1.48
TSR1-204ENST00000576112 EFCAB2Q5VUJ9 269 aa24.27■■□□□ 1.48
TSR1-204ENST00000576112 DIP2CQ9Y2E4 1556 aa24.27■■□□□ 1.48
TSR1-204ENST00000576112 CLIP1P30622 1438 aa24.27■■□□□ 1.48
TSR1-204ENST00000576112 ABCA6Q8N139 1617 aa24.26■■□□□ 1.47
TSR1-204ENST00000576112 HSPA2P54652 639 aa24.26■■□□□ 1.47
TSR1-204ENST00000576112 CDK11AQ9UQ88 783 aaPredicted RBP24.25■■□□□ 1.47
TSR1-204ENST00000576112 FBXO41Q8TF61 875 aa24.24■■□□□ 1.47
TSR1-204ENST00000576112 ITSN2Q9NZM3 1697 aa24.24■■□□□ 1.47
TSR1-204ENST00000576112 ABCC1P33527 1531 aa24.23■■□□□ 1.47
TSR1-204ENST00000576112 PREX1Q8TCU6 1659 aa24.23■■□□□ 1.47
TSR1-204ENST00000576112 CDC42BPAQ5VT25 1732 aa24.23■■□□□ 1.47
TSR1-204ENST00000576112 CASKIN1Q8WXD9 1431 aa24.21■■□□□ 1.47
TSR1-204ENST00000576112 CCDC18Q5T9S5 1454 aa24.2■■□□□ 1.47
TSR1-204ENST00000576112 AFAP1Q8N556 730 aa24.19■■□□□ 1.46
TSR1-204ENST00000576112 REREQ9P2R6 1566 aa24.19■■□□□ 1.46
TSR1-204ENST00000576112 FYCO1Q9BQS8 1478 aa24.15■■□□□ 1.46
TSR1-204ENST00000576112 TRAPPC8Q9Y2L5 1435 aa24.15■■□□□ 1.46
TSR1-204ENST00000576112 KIDINS220Q9ULH0 1771 aa24.14■■□□□ 1.46
TSR1-204ENST00000576112 MLH3Q9UHC1 1453 aa24.13■■□□□ 1.45
TSR1-204ENST00000576112 C3P01024 1663 aa24.13■■□□□ 1.45
TSR1-204ENST00000576112 CEBPAP49715 358 aaPredicted RBP24.12■■□□□ 1.45
TSR1-204ENST00000576112 SAMD9LQ8IVG5 1584 aa24.11■■□□□ 1.45
TSR1-204ENST00000576112 STRCQ7RTU9 1775 aa24.1■■□□□ 1.45
TSR1-204ENST00000576112 AGLP35573 1532 aa24.07■■□□□ 1.44
TSR1-204ENST00000576112 MYT1LQ9UL68 1186 aa24.07■■□□□ 1.44
TSR1-204ENST00000576112 SYCP2Q9BX26 1530 aa24.06■■□□□ 1.44
TSR1-204ENST00000576112 SETD1BQ9UPS6 1966 aaKnown RBP24.01■■□□□ 1.43
TSR1-204ENST00000576112 UHRF1BP1Q6BDS2 1440 aa24.01■■□□□ 1.43
TSR1-204ENST00000576112 GPATCH8Q9UKJ3 1502 aaKnown RBP24■■□□□ 1.43
TSR1-204ENST00000576112 SUPT6HQ7KZ85 1726 aaKnown RBP23.98■■□□□ 1.43
TSR1-204ENST00000576112 INO80Q9ULG1 1556 aaPredicted RBP23.98■■□□□ 1.43
TSR1-204ENST00000576112 MROH2AA6NES4 1674 aa23.95■■□□□ 1.43
TSR1-204ENST00000576112 CERKQ8TCT0 537 aa23.95■■□□□ 1.42
TSR1-204ENST00000576112 ATP7AQ04656 1500 aa23.94■■□□□ 1.42
TSR1-204ENST00000576112 ZNF777Q9ULD5 760 aaPredicted RBP23.94■■□□□ 1.42
TSR1-204ENST00000576112 PLXNC1O60486 1568 aa23.94■■□□□ 1.42
TSR1-204ENST00000576112 TIAM1Q13009 1591 aa23.91■■□□□ 1.42
TSR1-204ENST00000576112 CLTCQ00610 1675 aaKnown RBP23.9■■□□□ 1.42
TSR1-204ENST00000576112 CNTLNQ9NXG0 1405 aa23.89■■□□□ 1.41
TSR1-204ENST00000576112 HNRNPMP52272 730 aaKnown RBP eCLIP23.88■■□□□ 1.41
TSR1-204ENST00000576112 SPAG9O60271 1321 aaKnown RBP23.86■■□□□ 1.41
TSR1-204ENST00000576112 KIAA1107Q9UPP5 1409 aa23.86■■□□□ 1.41
TSR1-204ENST00000576112 EHBP1L1Q8N3D4 1523 aa23.85■■□□□ 1.41
TSR1-204ENST00000576112 CCNB3Q8WWL7 1395 aa23.85■■□□□ 1.41
TSR1-204ENST00000576112 PLEKHH2Q8IVE3 1493 aa23.85■■□□□ 1.41
TSR1-204ENST00000576112 ADGBQ8N7X0 1667 aa23.84■■□□□ 1.41
TSR1-204ENST00000576112 MTUS2Q5JR59 1369 aa23.84■■□□□ 1.41
TSR1-204ENST00000576112 ESF1Q9H501 851 aaKnown RBP23.84■■□□□ 1.41
TSR1-204ENST00000576112 MYO3AQ8NEV4 1616 aa23.84■■□□□ 1.41
TSR1-204ENST00000576112 A2MP01023 1474 aa23.83■■□□□ 1.41
TSR1-204ENST00000576112 NCOA1Q15788 1441 aa23.83■■□□□ 1.4
TSR1-204ENST00000576112 ZNF142P52746 1687 aaPredicted RBP23.83■■□□□ 1.4
TSR1-204ENST00000576112 CFDP1Q9UEE9 299 aaPredicted RBP23.82■■□□□ 1.4
TSR1-204ENST00000576112 PTPRTO14522 1441 aa23.82■■□□□ 1.4
TSR1-204ENST00000576112 CAMSAP1Q5T5Y3 1602 aa23.81■■□□□ 1.4
TSR1-204ENST00000576112 NPATQ14207 1427 aa23.8■■□□□ 1.4
TSR1-204ENST00000576112 LTBP4Q8N2S1 1624 aa23.8■■□□□ 1.4
TSR1-204ENST00000576112 DMRT2Q9Y5R5 561 aa23.79■■□□□ 1.4
TSR1-204ENST00000576112 ZNF644Q9H582 1327 aaPredicted RBP23.78■■□□□ 1.4
TSR1-204ENST00000576112 ZMYM3Q14202 1370 aa23.78■■□□□ 1.4
TSR1-204ENST00000576112 CEP162Q5TB80 1403 aa23.77■■□□□ 1.4
TSR1-204ENST00000576112 MBD5Q9P267 1494 aa23.77■■□□□ 1.4
TSR1-204ENST00000576112 CEP170BQ9Y4F5 1589 aaPredicted RBP23.74■■□□□ 1.39
TSR1-204ENST00000576112 PTPRKQ15262 1439 aa23.72■■□□□ 1.39
TSR1-204ENST00000576112 CAMSAP2Q08AD1 1489 aa23.68■■□□□ 1.38
TSR1-204ENST00000576112 GGT6Q6P531 493 aa23.68■■□□□ 1.38
TSR1-204ENST00000576112 NCOA2Q15596 1464 aa23.68■■□□□ 1.38
TSR1-204ENST00000576112 RTEL1-TNFRSF6BF6WH68 1400 aa23.66■■□□□ 1.38
TSR1-204ENST00000576112 CCDC141Q6ZP82 1450 aa23.65■■□□□ 1.38
TSR1-204ENST00000576112 NCKAP5LQ9HCH0 1330 aa23.64■■□□□ 1.38
TSR1-204ENST00000576112 PLA2R1Q13018 1463 aa23.64■■□□□ 1.38
TSR1-204ENST00000576112 TCOF1Q13428 1488 aaKnown RBP23.64■■□□□ 1.38
TSR1-204ENST00000576112 IQSEC2Q5JU85 1478 aa23.63■■□□□ 1.37
TSR1-204ENST00000576112 DNMT1P26358 1616 aaKnown RBP23.62■■□□□ 1.37
TSR1-204ENST00000576112 POLR1AO95602 1720 aaPredicted RBP23.6■■□□□ 1.37
TSR1-204ENST00000576112 DHX29Q7Z478 1369 aaKnown RBP23.6■■□□□ 1.37
TSR1-204ENST00000576112 KDM5DQ9BY66 1539 aa23.59■■□□□ 1.37
TSR1-204ENST00000576112 ARHGEF5Q12774 1597 aa23.59■■□□□ 1.37
TSR1-204ENST00000576112 ZNF335Q9H4Z2 1342 aaPredicted RBP23.59■■□□□ 1.37
TSR1-204ENST00000576112 A2ML1A8K2U0 1454 aa23.58■■□□□ 1.37
TSR1-204ENST00000576112 SPATA31D1Q6ZQQ2 1576 aa23.56■■□□□ 1.36
TSR1-204ENST00000576112 NEURL4Q96JN8 1562 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms