RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-223ENST00000575701 RAPGEF3O95398 923 aa40.2■■■■■ 4.03
SRRM2-223ENST00000575701 CDC42BPBQ9Y5S2 1711 aa40.19■■■■■ 4.02
SRRM2-223ENST00000575701 CDC42BPAQ5VT25 1732 aa40.15■■■■■ 4.02
SRRM2-223ENST00000575701 TIAM1Q13009 1591 aa40.14■■■■■ 4.02
SRRM2-223ENST00000575701 SCAPERQ9BY12 1400 aa40.13■■■■■ 4.01
SRRM2-223ENST00000575701 ZMYM4Q5VZL5 1548 aa40.11■■■■■ 4.01
SRRM2-223ENST00000575701 POGZQ7Z3K3 1410 aa40.1■■■■■ 4.01
SRRM2-223ENST00000575701 MAP3K1Q13233 1512 aa40.06■■■■■ 4
SRRM2-223ENST00000575701 GPATCH8Q9UKJ3 1502 aaKnown RBP40.05■■■■■ 4
SRRM2-223ENST00000575701 CCNB3Q8WWL7 1395 aa40.03■■■■■ 4
SRRM2-223ENST00000575701 AEBP2Q6ZN18 517 aaPredicted RBP40.03■■■■■ 4
SRRM2-223ENST00000575701 ARHGEF40Q8TER5 1519 aa40.02■■■■■ 4
SRRM2-223ENST00000575701 MAGI2Q86UL8 1455 aa40.02■■■■■ 4
SRRM2-223ENST00000575701 ABCC1P33527 1531 aa40.01■■■■□ 3.99
SRRM2-223ENST00000575701 ZNF518AQ6AHZ1 1483 aa40■■■■□ 3.99
SRRM2-223ENST00000575701 SUPT6HQ7KZ85 1726 aaKnown RBP40■■■■□ 3.99
SRRM2-223ENST00000575701 ITSN2Q9NZM3 1697 aa39.98■■■■□ 3.99
SRRM2-223ENST00000575701 LRRC9Q6ZRR7 1453 aa39.95■■■■□ 3.99
SRRM2-223ENST00000575701 KDM4FA0A1W2PPD8 638 aa39.95■■■■□ 3.99
SRRM2-223ENST00000575701 ZFYVE16Q7Z3T8 1539 aa39.95■■■■□ 3.99
SRRM2-223ENST00000575701 KDM5CP41229 1560 aa39.93■■■■□ 3.98
SRRM2-223ENST00000575701 NCOA2Q15596 1464 aa39.91■■■■□ 3.98
SRRM2-223ENST00000575701 SAMD9LQ8IVG5 1584 aa39.91■■■■□ 3.98
SRRM2-223ENST00000575701 CFDP1Q9UEE9 299 aaPredicted RBP39.9■■■■□ 3.98
SRRM2-223ENST00000575701 PLEKHH2Q8IVE3 1493 aa39.88■■■■□ 3.98
SRRM2-223ENST00000575701 ARHGEF12Q9NZN5 1544 aa39.86■■■■□ 3.97
SRRM2-223ENST00000575701 YEATS2Q9ULM3 1422 aa39.84■■■■□ 3.97
SRRM2-223ENST00000575701 APLP2Q06481 763 aa39.84■■■■□ 3.97
SRRM2-223ENST00000575701 ZNF777Q9ULD5 760 aaPredicted RBP39.84■■■■□ 3.97
SRRM2-223ENST00000575701 HECW2Q9P2P5 1572 aa39.84■■■■□ 3.97
SRRM2-223ENST00000575701 KIAA1107Q9UPP5 1409 aa39.82■■■■□ 3.97
SRRM2-223ENST00000575701 AFAP1Q8N556 730 aa39.82■■■■□ 3.97
SRRM2-223ENST00000575701 SYCP2Q9BX26 1530 aa39.81■■■■□ 3.96
SRRM2-223ENST00000575701 TRAPPC8Q9Y2L5 1435 aa39.81■■■■□ 3.96
SRRM2-223ENST00000575701 MLH3Q9UHC1 1453 aa39.78■■■■□ 3.96
SRRM2-223ENST00000575701 KANK4Q5T7N3 995 aaPredicted RBP39.74■■■■□ 3.95
SRRM2-223ENST00000575701 ATP10AO60312 1499 aa39.74■■■■□ 3.95
SRRM2-223ENST00000575701 C9orf84Q5VXU9 1444 aa39.72■■■■□ 3.95
SRRM2-223ENST00000575701 BCORL1Q5H9F3 1711 aa39.71■■■■□ 3.95
SRRM2-223ENST00000575701 ARID4BQ4LE39 1312 aaPredicted RBP39.7■■■■□ 3.95
SRRM2-223ENST00000575701 MYT1LQ9UL68 1186 aa39.68■■■■□ 3.94
SRRM2-223ENST00000575701 DIP2CQ9Y2E4 1556 aa39.67■■■■□ 3.94
SRRM2-223ENST00000575701 HNRNPMP52272 730 aaKnown RBP eCLIP39.67■■■■□ 3.948e-9■■■■■ 32.4
SRRM2-223ENST00000575701 ADAMTSL3P82987 1691 aa39.67■■■■□ 3.94
SRRM2-223ENST00000575701 ABCA6Q8N139 1617 aa39.65■■■■□ 3.94
SRRM2-223ENST00000575701 REREQ9P2R6 1566 aa39.64■■■■□ 3.94
SRRM2-223ENST00000575701 KIDINS220Q9ULH0 1771 aa39.64■■■■□ 3.94
SRRM2-223ENST00000575701 SIGLEC1Q9BZZ2 1709 aa39.62■■■■□ 3.93
SRRM2-223ENST00000575701 CAMSAP2Q08AD1 1489 aa39.62■■■■□ 3.93
SRRM2-223ENST00000575701 ZNF644Q9H582 1327 aaPredicted RBP39.62■■■■□ 3.93
SRRM2-223ENST00000575701 MBD5Q9P267 1494 aa39.6■■■■□ 3.93
SRRM2-223ENST00000575701 SPAG9O60271 1321 aaKnown RBP39.6■■■■□ 3.93
SRRM2-223ENST00000575701 MYOM3Q5VTT5 1437 aa39.58■■■■□ 3.93
SRRM2-223ENST00000575701 INO80Q9ULG1 1556 aaPredicted RBP39.57■■■■□ 3.92
SRRM2-223ENST00000575701 MIA2Q96PC5 1412 aa39.57■■■■□ 3.92
SRRM2-223ENST00000575701 ATP7AQ04656 1500 aa39.56■■■■□ 3.92
SRRM2-223ENST00000575701 MADDQ8WXG6 1647 aa39.52■■■■□ 3.92
SRRM2-223ENST00000575701 RSPH4AQ5TD94 716 aa39.52■■■■□ 3.92
SRRM2-223ENST00000575701 CCDC141Q6ZP82 1450 aa39.51■■■■□ 3.92
SRRM2-223ENST00000575701 ARHGEF5Q12774 1597 aa39.5■■■■□ 3.91
SRRM2-223ENST00000575701 AGLP35573 1532 aa39.49■■■■□ 3.91
SRRM2-223ENST00000575701 RTEL1-TNFRSF6BF6WH68 1400 aa39.46■■■■□ 3.91
SRRM2-223ENST00000575701 PTPRMP28827 1452 aa39.44■■■■□ 3.9
SRRM2-223ENST00000575701 RIMS1Q86UR5 1692 aaKnown RBP39.41■■■■□ 3.9
SRRM2-223ENST00000575701 ADGBQ8N7X0 1667 aa39.4■■■■□ 3.9
SRRM2-223ENST00000575701 FER1L4A9Z1Z3 1794 aa39.4■■■■□ 3.9
SRRM2-223ENST00000575701 MLECQ14165 292 aa39.38■■■■□ 3.89
SRRM2-223ENST00000575701 PLXNC1O60486 1568 aa39.36■■■■□ 3.89
SRRM2-223ENST00000575701 A2MP01023 1474 aa39.36■■■■□ 3.89
SRRM2-223ENST00000575701 PTPN23Q9H3S7 1636 aa39.35■■■■□ 3.89
SRRM2-223ENST00000575701 FGD6Q6ZV73 1430 aa39.33■■■■□ 3.89
SRRM2-223ENST00000575701 TSPY4P0CV99 314 aa39.31■■■■□ 3.88
SRRM2-223ENST00000575701 TSPY10P0CW01 314 aa39.31■■■■□ 3.88
SRRM2-223ENST00000575701 MAST1Q9Y2H9 1570 aa39.29■■■■□ 3.88
SRRM2-223ENST00000575701 TCOF1Q13428 1488 aaKnown RBP39.28■■■■□ 3.88
SRRM2-223ENST00000575701 DHX29Q7Z478 1369 aaKnown RBP39.21■■■■□ 3.87
SRRM2-223ENST00000575701 CROCC2H7BZ55 1655 aa39.19■■■■□ 3.86
SRRM2-223ENST00000575701 SHANK2Q9UPX8 1470 aa39.17■■■■□ 3.86
SRRM2-223ENST00000575701 DNMT1P26358 1616 aaKnown RBP39.17■■■■□ 3.86
SRRM2-223ENST00000575701 CNTLNQ9NXG0 1405 aa39.15■■■■□ 3.86
SRRM2-223ENST00000575701 ESF1Q9H501 851 aaKnown RBP39.15■■■■□ 3.86
SRRM2-223ENST00000575701 ABCC5O15440 1437 aa39.12■■■■□ 3.85
SRRM2-223ENST00000575701 DAPK1P53355 1430 aa39.11■■■■□ 3.85
SRRM2-223ENST00000575701 MROH2AA6NES4 1674 aa39.07■■■■□ 3.85
SRRM2-223ENST00000575701 PPP6R1Q9UPN7 881 aa39.06■■■■□ 3.84
SRRM2-223ENST00000575701 C3P01024 1663 aa39.03■■■■□ 3.84
SRRM2-223ENST00000575701 GGT6Q6P531 493 aa39.02■■■■□ 3.84
SRRM2-223ENST00000575701 EIF2AK4Q9P2K8 1649 aaKnown RBP39.01■■■■□ 3.84
SRRM2-223ENST00000575701 PLPPR3Q6T4P5 718 aa39.01■■■■□ 3.84
SRRM2-223ENST00000575701 DUOX2Q9NRD8 1548 aa39■■■■□ 3.83
SRRM2-223ENST00000575701 FAM135AQ9P2D6 1515 aa39■■■■□ 3.83
SRRM2-223ENST00000575701 KIF3BO15066 747 aa38.99■■■■□ 3.83
SRRM2-223ENST00000575701 FAM50AQ14320 339 aaKnown RBP38.98■■■■□ 3.83
SRRM2-223ENST00000575701 CLTCQ00610 1675 aaKnown RBP38.97■■■■□ 3.83
SRRM2-223ENST00000575701 CEBPAP49715 358 aaPredicted RBP38.95■■■■□ 3.83
SRRM2-223ENST00000575701 KIF15Q9NS87 1388 aa38.95■■■■□ 3.83
SRRM2-223ENST00000575701 LMTK3Q96Q04 1460 aa38.94■■■■□ 3.82
SRRM2-223ENST00000575701 RNF17Q9BXT8 1623 aaKnown RBP38.92■■■■□ 3.82
SRRM2-223ENST00000575701 PPARGC1BQ86YN6 1023 aaKnown RBP38.92■■■■□ 3.82
SRRM2-223ENST00000575701 PREX1Q8TCU6 1659 aa38.92■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms