RNA–Protein interactions for RNA: ENST00000575643.1

PSMB6-204, Transcript of proteasome subunit beta 6, humanhuman

TSL 2

Gene PSMB6, Length 666 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-204ENST00000575643 CCDC18Q5T9S5 1454 aa21.71■■□□□ 1.07
PSMB6-204ENST00000575643 YEATS2Q9ULM3 1422 aa21.7■■□□□ 1.06
PSMB6-204ENST00000575643 FYCO1Q9BQS8 1478 aa21.7■■□□□ 1.06
PSMB6-204ENST00000575643 PREX2Q70Z35 1606 aa21.69■■□□□ 1.06
PSMB6-204ENST00000575643 CLIP1P30622 1438 aa21.69■■□□□ 1.06
PSMB6-204ENST00000575643 CDC42BPBQ9Y5S2 1711 aa21.69■■□□□ 1.06
PSMB6-204ENST00000575643 ARHGAP5Q13017 1502 aa21.68■■□□□ 1.06
PSMB6-204ENST00000575643 RIMS1Q86UR5 1692 aaKnown RBP21.66■■□□□ 1.06
PSMB6-204ENST00000575643 PTPRMP28827 1452 aa21.65■■□□□ 1.06
PSMB6-204ENST00000575643 SCAPERQ9BY12 1400 aa21.65■■□□□ 1.06
PSMB6-204ENST00000575643 CDC42BPAQ5VT25 1732 aa21.64■■□□□ 1.06
PSMB6-204ENST00000575643 CDK11AQ9UQ88 783 aaPredicted RBP21.63■■□□□ 1.05
PSMB6-204ENST00000575643 KDM5CP41229 1560 aa21.62■■□□□ 1.05
PSMB6-204ENST00000575643 MAGI2Q86UL8 1455 aa21.61■■□□□ 1.05
PSMB6-204ENST00000575643 ITSN2Q9NZM3 1697 aa21.6■■□□□ 1.05
PSMB6-204ENST00000575643 ABCC1P33527 1531 aa21.6■■□□□ 1.05
PSMB6-204ENST00000575643 ARID4BQ4LE39 1312 aaPredicted RBP21.59■■□□□ 1.05
PSMB6-204ENST00000575643 FER1L4A9Z1Z3 1794 aa21.58■■□□□ 1.04
PSMB6-204ENST00000575643 ZNF518AQ6AHZ1 1483 aa21.57■■□□□ 1.04
PSMB6-204ENST00000575643 ABCA6Q8N139 1617 aa21.55■■□□□ 1.04
PSMB6-204ENST00000575643 EFCAB2Q5VUJ9 269 aa21.55■■□□□ 1.04
PSMB6-204ENST00000575643 DIP2CQ9Y2E4 1556 aa21.55■■□□□ 1.04
PSMB6-204ENST00000575643 ARHGEF12Q9NZN5 1544 aa21.54■■□□□ 1.04
PSMB6-204ENST00000575643 C9orf84Q5VXU9 1444 aa21.53■■□□□ 1.04
PSMB6-204ENST00000575643 CEP162Q5TB80 1403 aa21.52■■□□□ 1.04
PSMB6-204ENST00000575643 SAMD9LQ8IVG5 1584 aa21.52■■□□□ 1.04
PSMB6-204ENST00000575643 ATP10AO60312 1499 aa21.5■■□□□ 1.03
PSMB6-204ENST00000575643 TRAPPC8Q9Y2L5 1435 aa21.48■■□□□ 1.03
PSMB6-204ENST00000575643 LMTK3Q96Q04 1460 aa21.47■■□□□ 1.03
PSMB6-204ENST00000575643 SYCP2Q9BX26 1530 aa21.47■■□□□ 1.03
PSMB6-204ENST00000575643 KIDINS220Q9ULH0 1771 aa21.46■■□□□ 1.03
PSMB6-204ENST00000575643 REREQ9P2R6 1566 aa21.46■■□□□ 1.03
PSMB6-204ENST00000575643 AFAP1Q8N556 730 aa21.45■■□□□ 1.02
PSMB6-204ENST00000575643 GPATCH8Q9UKJ3 1502 aaKnown RBP21.45■■□□□ 1.02
PSMB6-204ENST00000575643 TIAM1Q13009 1591 aa21.44■■□□□ 1.02
PSMB6-204ENST00000575643 EHBP1L1Q8N3D4 1523 aa21.44■■□□□ 1.02
PSMB6-204ENST00000575643 MLECQ14165 292 aa21.43■■□□□ 1.02
PSMB6-204ENST00000575643 MLH3Q9UHC1 1453 aa21.43■■□□□ 1.02
PSMB6-204ENST00000575643 MTUS2Q5JR59 1369 aa21.39■■□□□ 1.02
PSMB6-204ENST00000575643 PLPPR3Q6T4P5 718 aa21.38■■□□□ 1.01
PSMB6-204ENST00000575643 INO80Q9ULG1 1556 aaPredicted RBP21.38■■□□□ 1.01
PSMB6-204ENST00000575643 AGLP35573 1532 aa21.34■■□□□ 1.01
PSMB6-204ENST00000575643 PREX1Q8TCU6 1659 aa21.34■■□□□ 1.01
PSMB6-204ENST00000575643 MYT1LQ9UL68 1186 aa21.34■■□□□ 1.01
PSMB6-204ENST00000575643 ZNF777Q9ULD5 760 aaPredicted RBP21.34■■□□□ 1.01
PSMB6-204ENST00000575643 CCNB3Q8WWL7 1395 aa21.34■■□□□ 1.01
PSMB6-204ENST00000575643 ATP7AQ04656 1500 aa21.34■■□□□ 1.01
PSMB6-204ENST00000575643 C3P01024 1663 aa21.32■■□□□ 1
PSMB6-204ENST00000575643 SUPT6HQ7KZ85 1726 aaKnown RBP21.32■■□□□ 1
PSMB6-204ENST00000575643 PLEKHH2Q8IVE3 1493 aa21.3■■□□□ 1
PSMB6-204ENST00000575643 PLXNC1O60486 1568 aa21.3■■□□□ 1
PSMB6-204ENST00000575643 KIAA1107Q9UPP5 1409 aa21.29■■□□□ 1
PSMB6-204ENST00000575643 ILDR1Q86SU0 546 aaPredicted RBP21.27■■□□□ 1
PSMB6-204ENST00000575643 CFDP1Q9UEE9 299 aaPredicted RBP21.27■■□□□ 1
PSMB6-204ENST00000575643 VPS8Q8N3P4 1428 aa21.27■■□□□ 1
PSMB6-204ENST00000575643 NCOA2Q15596 1464 aa21.26■□□□□ 0.99
PSMB6-204ENST00000575643 LOC105371045A0A1W2PR82 267 aa21.26■□□□□ 0.99
PSMB6-204ENST00000575643 HNRNPMP52272 730 aaKnown RBP eCLIP21.26■□□□□ 0.99
PSMB6-204ENST00000575643 HSPA2P54652 639 aa21.26■□□□□ 0.99
PSMB6-204ENST00000575643 CEBPAP49715 358 aaPredicted RBP21.24■□□□□ 0.99
PSMB6-204ENST00000575643 ADGBQ8N7X0 1667 aa21.24■□□□□ 0.99
PSMB6-204ENST00000575643 SPAG9O60271 1321 aaKnown RBP21.24■□□□□ 0.99
PSMB6-204ENST00000575643 MBD5Q9P267 1494 aa21.23■□□□□ 0.99
PSMB6-204ENST00000575643 ZNF644Q9H582 1327 aaPredicted RBP21.23■□□□□ 0.99
PSMB6-204ENST00000575643 MROH2AA6NES4 1674 aa21.22■□□□□ 0.99
PSMB6-204ENST00000575643 CAMSAP2Q08AD1 1489 aa21.22■□□□□ 0.99
PSMB6-204ENST00000575643 CLTCQ00610 1675 aaKnown RBP21.2■□□□□ 0.98
PSMB6-204ENST00000575643 A2MP01023 1474 aa21.2■□□□□ 0.98
PSMB6-204ENST00000575643 LRRC9Q6ZRR7 1453 aa21.18■□□□□ 0.98
PSMB6-204ENST00000575643 STRCQ7RTU9 1775 aa21.16■□□□□ 0.98
PSMB6-204ENST00000575643 UHRF1BP1Q6BDS2 1440 aa21.16■□□□□ 0.98
PSMB6-204ENST00000575643 CCDC141Q6ZP82 1450 aa21.15■□□□□ 0.98
PSMB6-204ENST00000575643 CNTLNQ9NXG0 1405 aa21.15■□□□□ 0.98
PSMB6-204ENST00000575643 ARHGEF5Q12774 1597 aa21.12■□□□□ 0.97
PSMB6-204ENST00000575643 MAP3K1Q13233 1512 aa21.11■□□□□ 0.97
PSMB6-204ENST00000575643 SETD1BQ9UPS6 1966 aaKnown RBP21.11■□□□□ 0.97
PSMB6-204ENST00000575643 MYO3AQ8NEV4 1616 aa21.11■□□□□ 0.97
PSMB6-204ENST00000575643 RTEL1-TNFRSF6BF6WH68 1400 aa21.09■□□□□ 0.97
PSMB6-204ENST00000575643 ESF1Q9H501 851 aaKnown RBP21.08■□□□□ 0.97
PSMB6-204ENST00000575643 ZNF142P52746 1687 aaPredicted RBP21.08■□□□□ 0.96
PSMB6-204ENST00000575643 KANK4Q5T7N3 995 aaPredicted RBP21.05■□□□□ 0.96
PSMB6-204ENST00000575643 NPATQ14207 1427 aa21.04■□□□□ 0.96
PSMB6-204ENST00000575643 MAST1Q9Y2H9 1570 aa21.03■□□□□ 0.96
PSMB6-204ENST00000575643 ZMYM3Q14202 1370 aa21.03■□□□□ 0.96
PSMB6-204ENST00000575643 MYOM3Q5VTT5 1437 aa21.02■□□□□ 0.96
PSMB6-204ENST00000575643 CROCC2H7BZ55 1655 aa21.01■□□□□ 0.95
PSMB6-204ENST00000575643 DHX29Q7Z478 1369 aaKnown RBP21■□□□□ 0.95
PSMB6-204ENST00000575643 KDM5DQ9BY66 1539 aa21■□□□□ 0.95
PSMB6-204ENST00000575643 GGT6Q6P531 493 aa21■□□□□ 0.95
PSMB6-204ENST00000575643 PTPRKQ15262 1439 aa21■□□□□ 0.95
PSMB6-204ENST00000575643 CEP170BQ9Y4F5 1589 aaPredicted RBP21■□□□□ 0.95
PSMB6-204ENST00000575643 CAMSAP1Q5T5Y3 1602 aa21■□□□□ 0.95
PSMB6-204ENST00000575643 NCOA1Q15788 1441 aa20.99■□□□□ 0.95
PSMB6-204ENST00000575643 FBXO41Q8TF61 875 aa20.99■□□□□ 0.95
PSMB6-204ENST00000575643 RNF17Q9BXT8 1623 aaKnown RBP20.98■□□□□ 0.95
PSMB6-204ENST00000575643 FAM135AQ9P2D6 1515 aa20.96■□□□□ 0.95
PSMB6-204ENST00000575643 PTPN23Q9H3S7 1636 aa20.96■□□□□ 0.95
PSMB6-204ENST00000575643 MIA2Q96PC5 1412 aa20.95■□□□□ 0.95
PSMB6-204ENST00000575643 EIF2AK4Q9P2K8 1649 aaKnown RBP20.95■□□□□ 0.94
PSMB6-204ENST00000575643 MROH1Q8NDA8 1641 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms