RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 YEATS2Q9ULM3 1422 aa17.24■□□□□ 0.35
TVP23B-208ENST00000575261 ATP1B4Q9UN42 357 aaPredicted RBP17.24■□□□□ 0.35
TVP23B-208ENST00000575261 CDK11AQ9UQ88 783 aaPredicted RBP17.24■□□□□ 0.35
TVP23B-208ENST00000575261 SCAPERQ9BY12 1400 aa17.23■□□□□ 0.35
TVP23B-208ENST00000575261 SIGLEC1Q9BZZ2 1709 aa17.23■□□□□ 0.35
TVP23B-208ENST00000575261 CLIP1P30622 1438 aa17.21■□□□□ 0.35
TVP23B-208ENST00000575261 TROQ12816 1431 aaPredicted RBP17.21■□□□□ 0.35
TVP23B-208ENST00000575261 LMTK3Q96Q04 1460 aa17.21■□□□□ 0.35
TVP23B-208ENST00000575261 LRRIQ1Q96JM4 1722 aa17.21■□□□□ 0.35
TVP23B-208ENST00000575261 FER1L4A9Z1Z3 1794 aa17.18■□□□□ 0.34
TVP23B-208ENST00000575261 ARHGAP5Q13017 1502 aa17.18■□□□□ 0.34
TVP23B-208ENST00000575261 EFCAB2Q5VUJ9 269 aa17.18■□□□□ 0.34
TVP23B-208ENST00000575261 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
TVP23B-208ENST00000575261 CCDC18Q5T9S5 1454 aa17.17■□□□□ 0.34
TVP23B-208ENST00000575261 C9orf84Q5VXU9 1444 aa17.16■□□□□ 0.34
TVP23B-208ENST00000575261 KDM5CP41229 1560 aa17.15■□□□□ 0.34
TVP23B-208ENST00000575261 ATP10AO60312 1499 aa17.14■□□□□ 0.33
TVP23B-208ENST00000575261 CASKIN1Q8WXD9 1431 aa17.13■□□□□ 0.33
TVP23B-208ENST00000575261 ARHGEF12Q9NZN5 1544 aa17.13■□□□□ 0.33
TVP23B-208ENST00000575261 PREX2Q70Z35 1606 aa17.13■□□□□ 0.33
TVP23B-208ENST00000575261 CDC42BPBQ9Y5S2 1711 aa17.13■□□□□ 0.33
TVP23B-208ENST00000575261 MLECQ14165 292 aa17.11■□□□□ 0.33
TVP23B-208ENST00000575261 FYCO1Q9BQS8 1478 aa17.1■□□□□ 0.33
TVP23B-208ENST00000575261 ABCC1P33527 1531 aa17.1■□□□□ 0.33
TVP23B-208ENST00000575261 DIP2CQ9Y2E4 1556 aa17.09■□□□□ 0.33
TVP23B-208ENST00000575261 REREQ9P2R6 1566 aa17.08■□□□□ 0.32
TVP23B-208ENST00000575261 PLPPR3Q6T4P5 718 aa17.08■□□□□ 0.32
TVP23B-208ENST00000575261 ITSN2Q9NZM3 1697 aa17.07■□□□□ 0.32
TVP23B-208ENST00000575261 ABCA6Q8N139 1617 aa17.07■□□□□ 0.32
TVP23B-208ENST00000575261 PREX1Q8TCU6 1659 aa17.06■□□□□ 0.32
TVP23B-208ENST00000575261 MLH3Q9UHC1 1453 aa17.05■□□□□ 0.32
TVP23B-208ENST00000575261 CDC42BPAQ5VT25 1732 aa17.05■□□□□ 0.32
TVP23B-208ENST00000575261 AFAP1Q8N556 730 aa17.05■□□□□ 0.32
TVP23B-208ENST00000575261 FBXO41Q8TF61 875 aa17.05■□□□□ 0.32
TVP23B-208ENST00000575261 HSPA2P54652 639 aa17.04■□□□□ 0.32
TVP23B-208ENST00000575261 MYT1LQ9UL68 1186 aa17.03■□□□□ 0.32
TVP23B-208ENST00000575261 TRAPPC8Q9Y2L5 1435 aa17.02■□□□□ 0.31
TVP23B-208ENST00000575261 AGLP35573 1532 aa17■□□□□ 0.31
TVP23B-208ENST00000575261 KIDINS220Q9ULH0 1771 aa16.99■□□□□ 0.31
TVP23B-208ENST00000575261 SAMD9LQ8IVG5 1584 aa16.98■□□□□ 0.31
TVP23B-208ENST00000575261 SYCP2Q9BX26 1530 aa16.96■□□□□ 0.31
TVP23B-208ENST00000575261 C3P01024 1663 aa16.96■□□□□ 0.31
TVP23B-208ENST00000575261 GPATCH8Q9UKJ3 1502 aaKnown RBP16.96■□□□□ 0.3
TVP23B-208ENST00000575261 UHRF1BP1Q6BDS2 1440 aa16.96■□□□□ 0.3
TVP23B-208ENST00000575261 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
TVP23B-208ENST00000575261 SETD1BQ9UPS6 1966 aaKnown RBP16.93■□□□□ 0.3
TVP23B-208ENST00000575261 ESF1Q9H501 851 aaKnown RBP16.92■□□□□ 0.3
TVP23B-208ENST00000575261 PLEKHH2Q8IVE3 1493 aa16.92■□□□□ 0.3
TVP23B-208ENST00000575261 CNTLNQ9NXG0 1405 aa16.91■□□□□ 0.3
TVP23B-208ENST00000575261 ZNF777Q9ULD5 760 aaPredicted RBP16.91■□□□□ 0.3
TVP23B-208ENST00000575261 ATP7AQ04656 1500 aa16.91■□□□□ 0.3
TVP23B-208ENST00000575261 INO80Q9ULG1 1556 aaPredicted RBP16.9■□□□□ 0.3
TVP23B-208ENST00000575261 KIAA1107Q9UPP5 1409 aa16.9■□□□□ 0.3
TVP23B-208ENST00000575261 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.3
TVP23B-208ENST00000575261 STRCQ7RTU9 1775 aa16.89■□□□□ 0.3
TVP23B-208ENST00000575261 MROH2AA6NES4 1674 aa16.89■□□□□ 0.29
TVP23B-208ENST00000575261 EHBP1L1Q8N3D4 1523 aa16.89■□□□□ 0.29
TVP23B-208ENST00000575261 CCNB3Q8WWL7 1395 aa16.89■□□□□ 0.29
TVP23B-208ENST00000575261 PLXNC1O60486 1568 aa16.88■□□□□ 0.29
TVP23B-208ENST00000575261 SPAG9O60271 1321 aaKnown RBP16.88■□□□□ 0.29
TVP23B-208ENST00000575261 CFDP1Q9UEE9 299 aaPredicted RBP16.87■□□□□ 0.29
TVP23B-208ENST00000575261 SUPT6HQ7KZ85 1726 aaKnown RBP16.87■□□□□ 0.29
TVP23B-208ENST00000575261 TIAM1Q13009 1591 aa16.86■□□□□ 0.29
TVP23B-208ENST00000575261 CERKQ8TCT0 537 aa16.86■□□□□ 0.29
TVP23B-208ENST00000575261 HNRNPMP52272 730 aaKnown RBP eCLIP16.85■□□□□ 0.296e-8■■■□□ 15.2
TVP23B-208ENST00000575261 DMRT2Q9Y5R5 561 aa16.85■□□□□ 0.29
TVP23B-208ENST00000575261 A2MP01023 1474 aa16.83■□□□□ 0.28
TVP23B-208ENST00000575261 NPATQ14207 1427 aa16.83■□□□□ 0.28
TVP23B-208ENST00000575261 CEP162Q5TB80 1403 aa16.83■□□□□ 0.28
TVP23B-208ENST00000575261 ADGBQ8N7X0 1667 aa16.82■□□□□ 0.28
TVP23B-208ENST00000575261 CLTCQ00610 1675 aaKnown RBP16.81■□□□□ 0.28
TVP23B-208ENST00000575261 PTPRTO14522 1441 aa16.8■□□□□ 0.28
TVP23B-208ENST00000575261 NCOA1Q15788 1441 aa16.79■□□□□ 0.28
TVP23B-208ENST00000575261 ZMYM3Q14202 1370 aa16.78■□□□□ 0.28
TVP23B-208ENST00000575261 MBD5Q9P267 1494 aa16.78■□□□□ 0.28
TVP23B-208ENST00000575261 MYO3AQ8NEV4 1616 aa16.78■□□□□ 0.28
TVP23B-208ENST00000575261 ZNF142P52746 1687 aaPredicted RBP16.77■□□□□ 0.28
TVP23B-208ENST00000575261 CAMSAP1Q5T5Y3 1602 aa16.76■□□□□ 0.27
TVP23B-208ENST00000575261 RTEL1-TNFRSF6BF6WH68 1400 aa16.75■□□□□ 0.27
TVP23B-208ENST00000575261 ZNF644Q9H582 1327 aaPredicted RBP16.74■□□□□ 0.27
TVP23B-208ENST00000575261 NCOA2Q15596 1464 aa16.73■□□□□ 0.27
TVP23B-208ENST00000575261 CCDC141Q6ZP82 1450 aa16.73■□□□□ 0.27
TVP23B-208ENST00000575261 CEP170BQ9Y4F5 1589 aaPredicted RBP16.73■□□□□ 0.27
TVP23B-208ENST00000575261 CAMSAP2Q08AD1 1489 aa16.73■□□□□ 0.27
TVP23B-208ENST00000575261 PTPRKQ15262 1439 aa16.72■□□□□ 0.27
TVP23B-208ENST00000575261 GGT6Q6P531 493 aa16.72■□□□□ 0.27
TVP23B-208ENST00000575261 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
TVP23B-208ENST00000575261 LTBP4Q8N2S1 1624 aa16.7■□□□□ 0.26
TVP23B-208ENST00000575261 PLA2R1Q13018 1463 aa16.7■□□□□ 0.26
TVP23B-208ENST00000575261 FAM135AQ9P2D6 1515 aa16.7■□□□□ 0.26
TVP23B-208ENST00000575261 IQSEC2Q5JU85 1478 aa16.69■□□□□ 0.26
TVP23B-208ENST00000575261 DHX29Q7Z478 1369 aaKnown RBP16.69■□□□□ 0.26
TVP23B-208ENST00000575261 ARHGEF5Q12774 1597 aa16.68■□□□□ 0.26
TVP23B-208ENST00000575261 KDM5DQ9BY66 1539 aa16.67■□□□□ 0.26
TVP23B-208ENST00000575261 VPS8Q8N3P4 1428 aa16.67■□□□□ 0.26
TVP23B-208ENST00000575261 TCOF1Q13428 1488 aaKnown RBP16.66■□□□□ 0.26
TVP23B-208ENST00000575261 RSPH4AQ5TD94 716 aa16.65■□□□□ 0.26
TVP23B-208ENST00000575261 LRRC9Q6ZRR7 1453 aa16.65■□□□□ 0.26
TVP23B-208ENST00000575261 A2ML1A8K2U0 1454 aa16.64■□□□□ 0.25
TVP23B-208ENST00000575261 PZPP20742 1482 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms