RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 EFCAB2Q5VUJ9 269 aa22.49■■□□□ 1.19
NPLOC4-218ENST00000574964 FANCAO15360 1455 aa22.47■■□□□ 1.19
NPLOC4-218ENST00000574964 ARAP3Q8WWN8 1544 aa22.47■■□□□ 1.19
NPLOC4-218ENST00000574964 GPATCH8Q9UKJ3 1502 aaKnown RBP22.47■■□□□ 1.19
NPLOC4-218ENST00000574964 CFDP1Q9UEE9 299 aaPredicted RBP22.46■■□□□ 1.19
NPLOC4-218ENST00000574964 NEO1Q92859 1461 aa22.46■■□□□ 1.19
NPLOC4-218ENST00000574964 ZNF777Q9ULD5 760 aaPredicted RBP22.45■■□□□ 1.18
NPLOC4-218ENST00000574964 PHLDB1Q86UU1 1377 aa22.44■■□□□ 1.18
NPLOC4-218ENST00000574964 KDM6BO15054 1643 aa22.42■■□□□ 1.18
NPLOC4-218ENST00000574964 AKNAQ7Z591 1439 aa22.42■■□□□ 1.18
NPLOC4-218ENST00000574964 MYOM3Q5VTT5 1437 aa22.39■■□□□ 1.17
NPLOC4-218ENST00000574964 ADGRL1O94910 1474 aa22.38■■□□□ 1.17
NPLOC4-218ENST00000574964 SAMD9LQ8IVG5 1584 aa22.35■■□□□ 1.17
NPLOC4-218ENST00000574964 SCAPERQ9BY12 1400 aa22.34■■□□□ 1.17
NPLOC4-218ENST00000574964 DENND4BO75064 1496 aaPredicted RBP22.33■■□□□ 1.16
NPLOC4-218ENST00000574964 PLEKHH2Q8IVE3 1493 aa22.33■■□□□ 1.16
NPLOC4-218ENST00000574964 MIA2Q96PC5 1412 aa22.32■■□□□ 1.16
NPLOC4-218ENST00000574964 ABCC1P33527 1531 aa22.31■■□□□ 1.16
NPLOC4-218ENST00000574964 COL17A1Q9UMD9 1497 aaPredicted RBP22.3■■□□□ 1.16
NPLOC4-218ENST00000574964 ZNF644Q9H582 1327 aaPredicted RBP22.3■■□□□ 1.16
NPLOC4-218ENST00000574964 CAMSAP2Q08AD1 1489 aa22.29■■□□□ 1.16
NPLOC4-218ENST00000574964 PTPN23Q9H3S7 1636 aa22.29■■□□□ 1.16
NPLOC4-218ENST00000574964 RAPGEF3O95398 923 aa22.29■■□□□ 1.16
NPLOC4-218ENST00000574964 FGD6Q6ZV73 1430 aa22.29■■□□□ 1.16
NPLOC4-218ENST00000574964 RICTORQ6R327 1708 aa22.28■■□□□ 1.16
NPLOC4-218ENST00000574964 SYCP2Q9BX26 1530 aa22.28■■□□□ 1.16
NPLOC4-218ENST00000574964 HNRNPMP52272 730 aaKnown RBP eCLIP22.28■■□□□ 1.16
NPLOC4-218ENST00000574964 KIAA1107Q9UPP5 1409 aa22.26■■□□□ 1.15
NPLOC4-218ENST00000574964 MYT1LQ9UL68 1186 aa22.26■■□□□ 1.15
NPLOC4-218ENST00000574964 POGZQ7Z3K3 1410 aa22.24■■□□□ 1.15
NPLOC4-218ENST00000574964 FAM50AQ14320 339 aaKnown RBP22.24■■□□□ 1.15
NPLOC4-218ENST00000574964 ARHGEF12Q9NZN5 1544 aa22.24■■□□□ 1.15
NPLOC4-218ENST00000574964 ZNF518AQ6AHZ1 1483 aa22.23■■□□□ 1.15
NPLOC4-218ENST00000574964 AFAP1Q8N556 730 aa22.22■■□□□ 1.15
NPLOC4-218ENST00000574964 TRAPPC8Q9Y2L5 1435 aa22.22■■□□□ 1.15
NPLOC4-218ENST00000574964 FRMPD1Q5SYB0 1578 aa22.21■■□□□ 1.15
NPLOC4-218ENST00000574964 RSPH4AQ5TD94 716 aa22.21■■□□□ 1.15
NPLOC4-218ENST00000574964 TCOF1Q13428 1488 aaKnown RBP22.19■■□□□ 1.14
NPLOC4-218ENST00000574964 ARHGEF5Q12774 1597 aa22.17■■□□□ 1.14
NPLOC4-218ENST00000574964 CCDC141Q6ZP82 1450 aa22.17■■□□□ 1.14
NPLOC4-218ENST00000574964 MBD5Q9P267 1494 aa22.17■■□□□ 1.14
NPLOC4-218ENST00000574964 KDM5CP41229 1560 aa22.16■■□□□ 1.14
NPLOC4-218ENST00000574964 SPAG9O60271 1321 aaKnown RBP22.16■■□□□ 1.14
NPLOC4-218ENST00000574964 TSPY4P0CV99 314 aa22.16■■□□□ 1.14
NPLOC4-218ENST00000574964 TSPY10P0CW01 314 aa22.16■■□□□ 1.14
NPLOC4-218ENST00000574964 ZMYM4Q5VZL5 1548 aa22.16■■□□□ 1.14
NPLOC4-218ENST00000574964 HECW2Q9P2P5 1572 aa22.15■■□□□ 1.14
NPLOC4-218ENST00000574964 MAGI2Q86UL8 1455 aa22.13■■□□□ 1.13
NPLOC4-218ENST00000574964 DNMT1P26358 1616 aaKnown RBP22.13■■□□□ 1.13
NPLOC4-218ENST00000574964 ZFYVE16Q7Z3T8 1539 aa22.12■■□□□ 1.13
NPLOC4-218ENST00000574964 RRBP1Q9P2E9 1410 aaKnown RBP22.12■■□□□ 1.13
NPLOC4-218ENST00000574964 MLH3Q9UHC1 1453 aa22.1■■□□□ 1.13
NPLOC4-218ENST00000574964 KIDINS220Q9ULH0 1771 aa22.1■■□□□ 1.13
NPLOC4-218ENST00000574964 CROCC2H7BZ55 1655 aa22.1■■□□□ 1.13
NPLOC4-218ENST00000574964 DAPK1P53355 1430 aa22.09■■□□□ 1.13
NPLOC4-218ENST00000574964 ATP7AQ04656 1500 aa22.09■■□□□ 1.13
NPLOC4-218ENST00000574964 ITGAEP38570 1179 aa22.08■■□□□ 1.13
NPLOC4-218ENST00000574964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.08■■□□□ 1.12
NPLOC4-218ENST00000574964 ABCC5O15440 1437 aa22.07■■□□□ 1.12
NPLOC4-218ENST00000574964 YEATS2Q9ULM3 1422 aa22.07■■□□□ 1.12
NPLOC4-218ENST00000574964 ARHGEF40Q8TER5 1519 aa22.07■■□□□ 1.12
NPLOC4-218ENST00000574964 INO80Q9ULG1 1556 aaPredicted RBP22.07■■□□□ 1.12
NPLOC4-218ENST00000574964 RTEL1-TNFRSF6BF6WH68 1400 aa22.06■■□□□ 1.12
NPLOC4-218ENST00000574964 C9orf84Q5VXU9 1444 aa22.06■■□□□ 1.12
NPLOC4-218ENST00000574964 MAST1Q9Y2H9 1570 aa22.04■■□□□ 1.12
NPLOC4-218ENST00000574964 CHIC2Q9UKJ5 165 aa22.04■■□□□ 1.12
NPLOC4-218ENST00000574964 ABCA6Q8N139 1617 aa22.04■■□□□ 1.12
NPLOC4-218ENST00000574964 DIP2CQ9Y2E4 1556 aa22.03■■□□□ 1.12
NPLOC4-218ENST00000574964 ATP10AO60312 1499 aa22.03■■□□□ 1.12
NPLOC4-218ENST00000574964 SHANK2Q9UPX8 1470 aa22.03■■□□□ 1.12
NPLOC4-218ENST00000574964 ADGBQ8N7X0 1667 aa22.02■■□□□ 1.12
NPLOC4-218ENST00000574964 ARID4BQ4LE39 1312 aaPredicted RBP22■■□□□ 1.11
NPLOC4-218ENST00000574964 ANKRD30AQ9BXX3 1397 aa21.98■■□□□ 1.11
NPLOC4-218ENST00000574964 PLXNC1O60486 1568 aa21.96■■□□□ 1.11
NPLOC4-218ENST00000574964 A2MP01023 1474 aa21.96■■□□□ 1.11
NPLOC4-218ENST00000574964 RRP7BPQ9NSQ0 103 aa21.95■■□□□ 1.1
NPLOC4-218ENST00000574964 PTPRKQ15262 1439 aa21.94■■□□□ 1.1
NPLOC4-218ENST00000574964 REREQ9P2R6 1566 aa21.93■■□□□ 1.1
NPLOC4-218ENST00000574964 KIF15Q9NS87 1388 aa21.92■■□□□ 1.1
NPLOC4-218ENST00000574964 ADGRL2O95490 1459 aa21.91■■□□□ 1.1
NPLOC4-218ENST00000574964 NCOA1Q15788 1441 aa21.9■■□□□ 1.1
NPLOC4-218ENST00000574964 DHX29Q7Z478 1369 aaKnown RBP21.9■■□□□ 1.1
NPLOC4-218ENST00000574964 DUOX2Q9NRD8 1548 aa21.9■■□□□ 1.1
NPLOC4-218ENST00000574964 SIGLEC1Q9BZZ2 1709 aa21.89■■□□□ 1.1
NPLOC4-218ENST00000574964 ROCK1Q13464 1354 aa21.88■■□□□ 1.09
NPLOC4-218ENST00000574964 MLECQ14165 292 aa21.88■■□□□ 1.09
NPLOC4-218ENST00000574964 AGLP35573 1532 aa21.86■■□□□ 1.09
NPLOC4-218ENST00000574964 KIF3BO15066 747 aa21.85■■□□□ 1.09
NPLOC4-218ENST00000574964 BCORL1Q5H9F3 1711 aa21.84■■□□□ 1.09
NPLOC4-218ENST00000574964 EIF2AK4Q9P2K8 1649 aaKnown RBP21.83■■□□□ 1.08
NPLOC4-218ENST00000574964 GGT6Q6P531 493 aa21.82■■□□□ 1.08
NPLOC4-218ENST00000574964 ERBINQ96RT1 1412 aa21.81■■□□□ 1.08
NPLOC4-218ENST00000574964 ANKRD50Q9ULJ7 1429 aa21.8■■□□□ 1.08
NPLOC4-218ENST00000574964 GCC2Q8IWJ2 1684 aa21.8■■□□□ 1.08
NPLOC4-218ENST00000574964 TRIM26Q12899 539 aaPredicted RBP21.79■■□□□ 1.08
NPLOC4-218ENST00000574964 ESF1Q9H501 851 aaKnown RBP21.79■■□□□ 1.08
NPLOC4-218ENST00000574964 FER1L4A9Z1Z3 1794 aa21.78■■□□□ 1.08
NPLOC4-218ENST00000574964 ADAMTSL3P82987 1691 aa21.75■■□□□ 1.07
NPLOC4-218ENST00000574964 HFM1A2PYH4 1435 aa21.74■■□□□ 1.07
NPLOC4-218ENST00000574964 NAIPQ13075 1403 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms