RNA–Protein interactions for RNA: ENST00000574763.5

LITAF-215, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LITAF, Length 717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-215ENST00000574763 EFCAB2Q5VUJ9 269 aa28.18■■■□□ 2.1
LITAF-215ENST00000574763 ARID4BQ4LE39 1312 aaPredicted RBP28.18■■■□□ 2.1
LITAF-215ENST00000574763 ZFYVE16Q7Z3T8 1539 aa28.17■■■□□ 2.1
LITAF-215ENST00000574763 POGZQ7Z3K3 1410 aa28.17■■■□□ 2.1
LITAF-215ENST00000574763 FYCO1Q9BQS8 1478 aa28.16■■■□□ 2.1
LITAF-215ENST00000574763 MAGI2Q86UL8 1455 aa28.15■■■□□ 2.1
LITAF-215ENST00000574763 YEATS2Q9ULM3 1422 aa28.14■■■□□ 2.1
LITAF-215ENST00000574763 ARHGAP5Q13017 1502 aa28.13■■■□□ 2.09
LITAF-215ENST00000574763 PTPRMP28827 1452 aa28.12■■■□□ 2.09
LITAF-215ENST00000574763 MADDQ8WXG6 1647 aa28.11■■■□□ 2.09
LITAF-215ENST00000574763 CDC42BPBQ9Y5S2 1711 aa28.09■■■□□ 2.09
LITAF-215ENST00000574763 SIGLEC1Q9BZZ2 1709 aa28.07■■■□□ 2.08
LITAF-215ENST00000574763 PREX2Q70Z35 1606 aa28.07■■■□□ 2.08
LITAF-215ENST00000574763 ZNF518AQ6AHZ1 1483 aa28.03■■■□□ 2.08
LITAF-215ENST00000574763 RIMS1Q86UR5 1692 aaKnown RBP28.02■■■□□ 2.08
LITAF-215ENST00000574763 KDM5CP41229 1560 aa28■■■□□ 2.07
LITAF-215ENST00000574763 CDC42BPAQ5VT25 1732 aa28■■■□□ 2.07
LITAF-215ENST00000574763 ATP10AO60312 1499 aa27.99■■■□□ 2.07
LITAF-215ENST00000574763 AFAP1Q8N556 730 aa27.97■■■□□ 2.07
LITAF-215ENST00000574763 C9orf84Q5VXU9 1444 aa27.96■■■□□ 2.07
LITAF-215ENST00000574763 ABCC1P33527 1531 aa27.96■■■□□ 2.07
LITAF-215ENST00000574763 ITSN2Q9NZM3 1697 aa27.94■■■□□ 2.06
LITAF-215ENST00000574763 CEP162Q5TB80 1403 aa27.93■■■□□ 2.06
LITAF-215ENST00000574763 ARHGEF12Q9NZN5 1544 aa27.92■■■□□ 2.06
LITAF-215ENST00000574763 MLECQ14165 292 aa27.92■■■□□ 2.06
LITAF-215ENST00000574763 FER1L4A9Z1Z3 1794 aa27.91■■■□□ 2.06
LITAF-215ENST00000574763 TRAPPC8Q9Y2L5 1435 aa27.9■■■□□ 2.06
LITAF-215ENST00000574763 DIP2CQ9Y2E4 1556 aa27.9■■■□□ 2.06
LITAF-215ENST00000574763 MYT1LQ9UL68 1186 aa27.89■■■□□ 2.06
LITAF-215ENST00000574763 MLH3Q9UHC1 1453 aa27.89■■■□□ 2.05
LITAF-215ENST00000574763 GPATCH8Q9UKJ3 1502 aaKnown RBP27.87■■■□□ 2.05
LITAF-215ENST00000574763 ABCA6Q8N139 1617 aa27.86■■■□□ 2.05
LITAF-215ENST00000574763 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
LITAF-215ENST00000574763 SAMD9LQ8IVG5 1584 aa27.85■■■□□ 2.05
LITAF-215ENST00000574763 REREQ9P2R6 1566 aa27.84■■■□□ 2.05
LITAF-215ENST00000574763 LMTK3Q96Q04 1460 aa27.83■■■□□ 2.05
LITAF-215ENST00000574763 PLPPR3Q6T4P5 718 aa27.83■■■□□ 2.05
LITAF-215ENST00000574763 ZNF777Q9ULD5 760 aaPredicted RBP27.83■■■□□ 2.05
LITAF-215ENST00000574763 KIDINS220Q9ULH0 1771 aa27.81■■■□□ 2.04
LITAF-215ENST00000574763 CCNB3Q8WWL7 1395 aa27.8■■■□□ 2.04
LITAF-215ENST00000574763 SYCP2Q9BX26 1530 aa27.8■■■□□ 2.04
LITAF-215ENST00000574763 EHBP1L1Q8N3D4 1523 aa27.79■■■□□ 2.04
LITAF-215ENST00000574763 CFDP1Q9UEE9 299 aaPredicted RBP27.77■■■□□ 2.04
LITAF-215ENST00000574763 TIAM1Q13009 1591 aa27.74■■■□□ 2.03
LITAF-215ENST00000574763 AGLP35573 1532 aa27.74■■■□□ 2.03
LITAF-215ENST00000574763 PLEKHH2Q8IVE3 1493 aa27.74■■■□□ 2.03
LITAF-215ENST00000574763 LOC105371045A0A1W2PR82 267 aa27.73■■■□□ 2.03
LITAF-215ENST00000574763 HNRNPMP52272 730 aaKnown RBP eCLIP27.73■■■□□ 2.031e-6■■■□□ 15.6
LITAF-215ENST00000574763 KIAA1107Q9UPP5 1409 aa27.73■■■□□ 2.03
LITAF-215ENST00000574763 SPAG9O60271 1321 aaKnown RBP27.69■■■□□ 2.02
LITAF-215ENST00000574763 ILDR1Q86SU0 546 aaPredicted RBP27.69■■■□□ 2.02
LITAF-215ENST00000574763 ATP7AQ04656 1500 aa27.67■■■□□ 2.02
LITAF-215ENST00000574763 INO80Q9ULG1 1556 aaPredicted RBP27.66■■■□□ 2.02
LITAF-215ENST00000574763 CEBPAP49715 358 aaPredicted RBP27.66■■■□□ 2.02
LITAF-215ENST00000574763 HSPA2P54652 639 aa27.66■■■□□ 2.02
LITAF-215ENST00000574763 PREX1Q8TCU6 1659 aa27.64■■■□□ 2.02
LITAF-215ENST00000574763 SUPT6HQ7KZ85 1726 aaKnown RBP27.64■■■□□ 2.01
LITAF-215ENST00000574763 VPS8Q8N3P4 1428 aa27.63■■■□□ 2.01
LITAF-215ENST00000574763 ZNF644Q9H582 1327 aaPredicted RBP27.63■■■□□ 2.01
LITAF-215ENST00000574763 NCOA2Q15596 1464 aa27.61■■■□□ 2.01
LITAF-215ENST00000574763 C3P01024 1663 aa27.6■■■□□ 2.01
LITAF-215ENST00000574763 ESF1Q9H501 851 aaKnown RBP27.59■■■□□ 2.01
LITAF-215ENST00000574763 MBD5Q9P267 1494 aa27.57■■■□□ 2
LITAF-215ENST00000574763 PLXNC1O60486 1568 aa27.56■■■□□ 2
LITAF-215ENST00000574763 A2MP01023 1474 aa27.56■■■□□ 2
LITAF-215ENST00000574763 SETD1BQ9UPS6 1966 aaKnown RBP27.55■■■□□ 2
LITAF-215ENST00000574763 CNTLNQ9NXG0 1405 aa27.55■■■□□ 2
LITAF-215ENST00000574763 ADGBQ8N7X0 1667 aa27.53■■■□□ 2
LITAF-215ENST00000574763 UHRF1BP1Q6BDS2 1440 aa27.52■■■□□ 2
LITAF-215ENST00000574763 LRRC9Q6ZRR7 1453 aa27.51■■■□□ 2
LITAF-215ENST00000574763 CAMSAP2Q08AD1 1489 aa27.51■■□□□ 1.99
LITAF-215ENST00000574763 MROH2AA6NES4 1674 aa27.5■■□□□ 1.99
LITAF-215ENST00000574763 RTEL1-TNFRSF6BF6WH68 1400 aa27.49■■□□□ 1.99
LITAF-215ENST00000574763 MAP3K1Q13233 1512 aa27.47■■□□□ 1.99
LITAF-215ENST00000574763 CCDC141Q6ZP82 1450 aa27.47■■□□□ 1.99
LITAF-215ENST00000574763 CLTCQ00610 1675 aaKnown RBP27.44■■□□□ 1.98
LITAF-215ENST00000574763 ZMYM3Q14202 1370 aa27.41■■□□□ 1.98
LITAF-215ENST00000574763 KANK4Q5T7N3 995 aaPredicted RBP27.41■■□□□ 1.98
LITAF-215ENST00000574763 GGT6Q6P531 493 aa27.41■■□□□ 1.98
LITAF-215ENST00000574763 STRCQ7RTU9 1775 aa27.4■■□□□ 1.98
LITAF-215ENST00000574763 ARHGEF5Q12774 1597 aa27.4■■□□□ 1.98
LITAF-215ENST00000574763 RSPH4AQ5TD94 716 aa27.4■■□□□ 1.98
LITAF-215ENST00000574763 FBXO41Q8TF61 875 aa27.4■■□□□ 1.98
LITAF-215ENST00000574763 NPATQ14207 1427 aa27.4■■□□□ 1.98
LITAF-215ENST00000574763 DHX29Q7Z478 1369 aaKnown RBP27.38■■□□□ 1.97
LITAF-215ENST00000574763 PPP6R1Q9UPN7 881 aa27.34■■□□□ 1.97
LITAF-215ENST00000574763 DMRT2Q9Y5R5 561 aa27.32■■□□□ 1.96
LITAF-215ENST00000574763 MYOM3Q5VTT5 1437 aa27.32■■□□□ 1.96
LITAF-215ENST00000574763 TSPY4P0CV99 314 aa27.31■■□□□ 1.96
LITAF-215ENST00000574763 TSPY10P0CW01 314 aa27.31■■□□□ 1.96
LITAF-215ENST00000574763 PTPRKQ15262 1439 aa27.3■■□□□ 1.96
LITAF-215ENST00000574763 MIA2Q96PC5 1412 aa27.3■■□□□ 1.96
LITAF-215ENST00000574763 KIF3BO15066 747 aa27.29■■□□□ 1.96
LITAF-215ENST00000574763 MYO3AQ8NEV4 1616 aa27.27■■□□□ 1.96
LITAF-215ENST00000574763 MAST1Q9Y2H9 1570 aa27.27■■□□□ 1.96
LITAF-215ENST00000574763 APLP2Q06481 763 aa27.26■■□□□ 1.95
LITAF-215ENST00000574763 NCOA1Q15788 1441 aa27.25■■□□□ 1.95
LITAF-215ENST00000574763 ZNF142P52746 1687 aaPredicted RBP27.25■■□□□ 1.95
LITAF-215ENST00000574763 PTPRTO14522 1441 aa27.24■■□□□ 1.95
LITAF-215ENST00000574763 CERKQ8TCT0 537 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms