RNA–Protein interactions for RNA: ENST00000574703.5

LITAF-214, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-214ENST00000574703 DENND4BO75064 1496 aaPredicted RBP25.42■■□□□ 1.66
LITAF-214ENST00000574703 LRRC9Q6ZRR7 1453 aa25.42■■□□□ 1.66
LITAF-214ENST00000574703 CDC42BPBQ9Y5S2 1711 aa25.42■■□□□ 1.66
LITAF-214ENST00000574703 CCNB3Q8WWL7 1395 aa25.42■■□□□ 1.66
LITAF-214ENST00000574703 GPATCH8Q9UKJ3 1502 aaKnown RBP25.42■■□□□ 1.66
LITAF-214ENST00000574703 ADGRL1O94910 1474 aa25.41■■□□□ 1.66
LITAF-214ENST00000574703 CDC42BPAQ5VT25 1732 aa25.4■■□□□ 1.66
LITAF-214ENST00000574703 SCAPERQ9BY12 1400 aa25.39■■□□□ 1.66
LITAF-214ENST00000574703 KANK4Q5T7N3 995 aaPredicted RBP25.38■■□□□ 1.65
LITAF-214ENST00000574703 SUPT6HQ7KZ85 1726 aaKnown RBP25.37■■□□□ 1.65
LITAF-214ENST00000574703 NCOA2Q15596 1464 aa25.35■■□□□ 1.65
LITAF-214ENST00000574703 CFDP1Q9UEE9 299 aaPredicted RBP25.35■■□□□ 1.65
LITAF-214ENST00000574703 FRMPD1Q5SYB0 1578 aa25.35■■□□□ 1.65
LITAF-214ENST00000574703 RICTORQ6R327 1708 aa25.34■■□□□ 1.65
LITAF-214ENST00000574703 ZNF777Q9ULD5 760 aaPredicted RBP25.32■■□□□ 1.64
LITAF-214ENST00000574703 POGZQ7Z3K3 1410 aa25.31■■□□□ 1.64
LITAF-214ENST00000574703 ITSN2Q9NZM3 1697 aa25.29■■□□□ 1.64
LITAF-214ENST00000574703 ABCC1P33527 1531 aa25.28■■□□□ 1.64
LITAF-214ENST00000574703 ZNF518AQ6AHZ1 1483 aa25.27■■□□□ 1.64
LITAF-214ENST00000574703 ZMYM4Q5VZL5 1548 aa25.27■■□□□ 1.64
LITAF-214ENST00000574703 PLEKHH2Q8IVE3 1493 aa25.26■■□□□ 1.63
LITAF-214ENST00000574703 SAMD9LQ8IVG5 1584 aa25.26■■□□□ 1.63
LITAF-214ENST00000574703 AFAP1Q8N556 730 aa25.25■■□□□ 1.63
LITAF-214ENST00000574703 MAGI2Q86UL8 1455 aa25.25■■□□□ 1.63
LITAF-214ENST00000574703 ARHGEF12Q9NZN5 1544 aa25.24■■□□□ 1.63
LITAF-214ENST00000574703 KIAA1107Q9UPP5 1409 aa25.23■■□□□ 1.63
LITAF-214ENST00000574703 TRAPPC8Q9Y2L5 1435 aa25.21■■□□□ 1.63
LITAF-214ENST00000574703 HNRNPMP52272 730 aaKnown RBP eCLIP25.2■■□□□ 1.621e-6■■■□□ 15.6
LITAF-214ENST00000574703 KDM5CP41229 1560 aa25.19■■□□□ 1.62
LITAF-214ENST00000574703 ZNF644Q9H582 1327 aaPredicted RBP25.19■■□□□ 1.62
LITAF-214ENST00000574703 SYCP2Q9BX26 1530 aa25.19■■□□□ 1.62
LITAF-214ENST00000574703 ZFYVE16Q7Z3T8 1539 aa25.18■■□□□ 1.62
LITAF-214ENST00000574703 ARHGEF40Q8TER5 1519 aa25.17■■□□□ 1.62
LITAF-214ENST00000574703 MYOM3Q5VTT5 1437 aa25.16■■□□□ 1.62
LITAF-214ENST00000574703 YEATS2Q9ULM3 1422 aa25.16■■□□□ 1.62
LITAF-214ENST00000574703 MYT1LQ9UL68 1186 aa25.15■■□□□ 1.62
LITAF-214ENST00000574703 MLH3Q9UHC1 1453 aa25.15■■□□□ 1.62
LITAF-214ENST00000574703 MIA2Q96PC5 1412 aa25.14■■□□□ 1.62
LITAF-214ENST00000574703 CAMSAP2Q08AD1 1489 aa25.13■■□□□ 1.61
LITAF-214ENST00000574703 HECW2Q9P2P5 1572 aa25.12■■□□□ 1.61
LITAF-214ENST00000574703 MBD5Q9P267 1494 aa25.11■■□□□ 1.61
LITAF-214ENST00000574703 RSPH4AQ5TD94 716 aa25.11■■□□□ 1.61
LITAF-214ENST00000574703 ATP10AO60312 1499 aa25.1■■□□□ 1.61
LITAF-214ENST00000574703 KDM4FA0A1W2PPD8 638 aa25.1■■□□□ 1.61
LITAF-214ENST00000574703 SPAG9O60271 1321 aaKnown RBP25.1■■□□□ 1.61
LITAF-214ENST00000574703 ARID4BQ4LE39 1312 aaPredicted RBP25.08■■□□□ 1.6
LITAF-214ENST00000574703 C9orf84Q5VXU9 1444 aa25.04■■□□□ 1.6
LITAF-214ENST00000574703 KIDINS220Q9ULH0 1771 aa25.04■■□□□ 1.6
LITAF-214ENST00000574703 CCDC141Q6ZP82 1450 aa25.03■■□□□ 1.6
LITAF-214ENST00000574703 DIP2CQ9Y2E4 1556 aa25.03■■□□□ 1.6
LITAF-214ENST00000574703 FGD6Q6ZV73 1430 aa25.03■■□□□ 1.6
LITAF-214ENST00000574703 ARHGEF5Q12774 1597 aa25.02■■□□□ 1.6
LITAF-214ENST00000574703 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
LITAF-214ENST00000574703 ABCA6Q8N139 1617 aa25.01■■□□□ 1.59
LITAF-214ENST00000574703 ATP7AQ04656 1500 aa25.01■■□□□ 1.59
LITAF-214ENST00000574703 RTEL1-TNFRSF6BF6WH68 1400 aa25■■□□□ 1.59
LITAF-214ENST00000574703 INO80Q9ULG1 1556 aaPredicted RBP25■■□□□ 1.59
LITAF-214ENST00000574703 TSPY4P0CV99 314 aa24.99■■□□□ 1.59
LITAF-214ENST00000574703 TSPY10P0CW01 314 aa24.99■■□□□ 1.59
LITAF-214ENST00000574703 PTPN23Q9H3S7 1636 aa24.99■■□□□ 1.59
LITAF-214ENST00000574703 REREQ9P2R6 1566 aa24.99■■□□□ 1.59
LITAF-214ENST00000574703 PPARGC1BQ86YN6 1023 aaKnown RBP24.98■■□□□ 1.59
LITAF-214ENST00000574703 TCOF1Q13428 1488 aaKnown RBP24.96■■□□□ 1.59
LITAF-214ENST00000574703 SIGLEC1Q9BZZ2 1709 aa24.96■■□□□ 1.59
LITAF-214ENST00000574703 BCORL1Q5H9F3 1711 aa24.95■■□□□ 1.59
LITAF-214ENST00000574703 ADAMTSL3P82987 1691 aa24.92■■□□□ 1.58
LITAF-214ENST00000574703 AGLP35573 1532 aa24.91■■□□□ 1.58
LITAF-214ENST00000574703 A2MP01023 1474 aa24.9■■□□□ 1.58
LITAF-214ENST00000574703 MLECQ14165 292 aa24.9■■□□□ 1.58
LITAF-214ENST00000574703 MAST1Q9Y2H9 1570 aa24.88■■□□□ 1.57
LITAF-214ENST00000574703 FAM50AQ14320 339 aaKnown RBP24.88■■□□□ 1.57
LITAF-214ENST00000574703 ADGBQ8N7X0 1667 aa24.88■■□□□ 1.57
LITAF-214ENST00000574703 ABCC5O15440 1437 aa24.87■■□□□ 1.57
LITAF-214ENST00000574703 DAPK1P53355 1430 aa24.86■■□□□ 1.57
LITAF-214ENST00000574703 PLXNC1O60486 1568 aa24.84■■□□□ 1.57
LITAF-214ENST00000574703 DHX29Q7Z478 1369 aaKnown RBP24.84■■□□□ 1.57
LITAF-214ENST00000574703 DNMT1P26358 1616 aaKnown RBP24.84■■□□□ 1.57
LITAF-214ENST00000574703 MADDQ8WXG6 1647 aa24.84■■□□□ 1.57
LITAF-214ENST00000574703 SHANK2Q9UPX8 1470 aa24.83■■□□□ 1.57
LITAF-214ENST00000574703 CROCC2H7BZ55 1655 aa24.81■■□□□ 1.56
LITAF-214ENST00000574703 PTPRMP28827 1452 aa24.8■■□□□ 1.56
LITAF-214ENST00000574703 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.78■■□□□ 1.56
LITAF-214ENST00000574703 FER1L4A9Z1Z3 1794 aa24.77■■□□□ 1.56
LITAF-214ENST00000574703 RIMS1Q86UR5 1692 aaKnown RBP24.76■■□□□ 1.55
LITAF-214ENST00000574703 ESF1Q9H501 851 aaKnown RBP24.75■■□□□ 1.55
LITAF-214ENST00000574703 KIF3BO15066 747 aa24.74■■□□□ 1.55
LITAF-214ENST00000574703 GGT6Q6P531 493 aa24.74■■□□□ 1.55
LITAF-214ENST00000574703 CHIC2Q9UKJ5 165 aa24.74■■□□□ 1.55
LITAF-214ENST00000574703 ANKRD30AQ9BXX3 1397 aa24.74■■□□□ 1.55
LITAF-214ENST00000574703 RRP7BPQ9NSQ0 103 aa24.73■■□□□ 1.55
LITAF-214ENST00000574703 DUOX2Q9NRD8 1548 aa24.72■■□□□ 1.55
LITAF-214ENST00000574703 RRBP1Q9P2E9 1410 aaKnown RBP24.72■■□□□ 1.55
LITAF-214ENST00000574703 KIF15Q9NS87 1388 aa24.72■■□□□ 1.55
LITAF-214ENST00000574703 PPP6R1Q9UPN7 881 aa24.72■■□□□ 1.55
LITAF-214ENST00000574703 NCOA1Q15788 1441 aa24.69■■□□□ 1.54
LITAF-214ENST00000574703 CNTLNQ9NXG0 1405 aa24.69■■□□□ 1.54
LITAF-214ENST00000574703 ADGRL2O95490 1459 aa24.69■■□□□ 1.54
LITAF-214ENST00000574703 PTPRKQ15262 1439 aa24.66■■□□□ 1.54
LITAF-214ENST00000574703 EIF2AK4Q9P2K8 1649 aaKnown RBP24.65■■□□□ 1.54
LITAF-214ENST00000574703 PLPPR3Q6T4P5 718 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms