RNA–Protein interactions for RNA: ENST00000574293.1

GSE1-214, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 3

Gene GSE1, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-214ENST00000574293 CFAP74Q9C0B2 1584 aa24.44■■□□□ 1.5
GSE1-214ENST00000574293 GPATCH8Q9UKJ3 1502 aaKnown RBP24.42■■□□□ 1.5
GSE1-214ENST00000574293 CDC42BPBQ9Y5S2 1711 aa24.41■■□□□ 1.5
GSE1-214ENST00000574293 RAPGEF3O95398 923 aa24.41■■□□□ 1.5
GSE1-214ENST00000574293 PREX2Q70Z35 1606 aa24.41■■□□□ 1.5
GSE1-214ENST00000574293 CDC42BPAQ5VT25 1732 aa24.41■■□□□ 1.5
GSE1-214ENST00000574293 SUPT6HQ7KZ85 1726 aaKnown RBP24.41■■□□□ 1.5
GSE1-214ENST00000574293 NCOA2Q15596 1464 aa24.4■■□□□ 1.5
GSE1-214ENST00000574293 CFDP1Q9UEE9 299 aaPredicted RBP24.39■■□□□ 1.49
GSE1-214ENST00000574293 ZNF777Q9ULD5 760 aaPredicted RBP24.39■■□□□ 1.49
GSE1-214ENST00000574293 ADGRL1O94910 1474 aa24.38■■□□□ 1.49
GSE1-214ENST00000574293 SCAPERQ9BY12 1400 aa24.37■■□□□ 1.49
GSE1-214ENST00000574293 DENND4BO75064 1496 aaPredicted RBP24.37■■□□□ 1.49
GSE1-214ENST00000574293 ITSN2Q9NZM3 1697 aa24.3■■□□□ 1.48
GSE1-214ENST00000574293 FRMPD1Q5SYB0 1578 aa24.29■■□□□ 1.48
GSE1-214ENST00000574293 POGZQ7Z3K3 1410 aa24.27■■□□□ 1.48
GSE1-214ENST00000574293 SAMD9LQ8IVG5 1584 aa24.27■■□□□ 1.48
GSE1-214ENST00000574293 ZNF644Q9H582 1327 aaPredicted RBP24.27■■□□□ 1.48
GSE1-214ENST00000574293 RICTORQ6R327 1708 aa24.27■■□□□ 1.48
GSE1-214ENST00000574293 ABCC1P33527 1531 aa24.26■■□□□ 1.47
GSE1-214ENST00000574293 HNRNPMP52272 730 aaKnown RBP eCLIP24.26■■□□□ 1.47
GSE1-214ENST00000574293 AFAP1Q8N556 730 aa24.26■■□□□ 1.47
GSE1-214ENST00000574293 ARHGEF12Q9NZN5 1544 aa24.25■■□□□ 1.47
GSE1-214ENST00000574293 PPARGC1BQ86YN6 1023 aaKnown RBP24.25■■□□□ 1.47
GSE1-214ENST00000574293 ZNF518AQ6AHZ1 1483 aa24.22■■□□□ 1.47
GSE1-214ENST00000574293 PLEKHH2Q8IVE3 1493 aa24.22■■□□□ 1.47
GSE1-214ENST00000574293 MYOM3Q5VTT5 1437 aa24.22■■□□□ 1.47
GSE1-214ENST00000574293 TRAPPC8Q9Y2L5 1435 aa24.22■■□□□ 1.47
GSE1-214ENST00000574293 SYCP2Q9BX26 1530 aa24.21■■□□□ 1.47
GSE1-214ENST00000574293 MYT1LQ9UL68 1186 aa24.21■■□□□ 1.47
GSE1-214ENST00000574293 KIAA1107Q9UPP5 1409 aa24.19■■□□□ 1.46
GSE1-214ENST00000574293 ZMYM4Q5VZL5 1548 aa24.18■■□□□ 1.46
GSE1-214ENST00000574293 CAMSAP2Q08AD1 1489 aa24.17■■□□□ 1.46
GSE1-214ENST00000574293 MIA2Q96PC5 1412 aa24.16■■□□□ 1.46
GSE1-214ENST00000574293 MAGI2Q86UL8 1455 aa24.15■■□□□ 1.46
GSE1-214ENST00000574293 YEATS2Q9ULM3 1422 aa24.15■■□□□ 1.46
GSE1-214ENST00000574293 KDM5CP41229 1560 aa24.14■■□□□ 1.45
GSE1-214ENST00000574293 ZFYVE16Q7Z3T8 1539 aa24.14■■□□□ 1.45
GSE1-214ENST00000574293 MBD5Q9P267 1494 aa24.12■■□□□ 1.45
GSE1-214ENST00000574293 SPAG9O60271 1321 aaKnown RBP24.1■■□□□ 1.45
GSE1-214ENST00000574293 ARHGEF40Q8TER5 1519 aa24.1■■□□□ 1.45
GSE1-214ENST00000574293 FGD6Q6ZV73 1430 aa24.1■■□□□ 1.45
GSE1-214ENST00000574293 HECW2Q9P2P5 1572 aa24.09■■□□□ 1.45
GSE1-214ENST00000574293 MLH3Q9UHC1 1453 aa24.09■■□□□ 1.45
GSE1-214ENST00000574293 RSPH4AQ5TD94 716 aa24.08■■□□□ 1.45
GSE1-214ENST00000574293 ARID4BQ4LE39 1312 aaPredicted RBP24.07■■□□□ 1.44
GSE1-214ENST00000574293 PTPN23Q9H3S7 1636 aa24.06■■□□□ 1.44
GSE1-214ENST00000574293 ATP10AO60312 1499 aa24.06■■□□□ 1.44
GSE1-214ENST00000574293 CCDC141Q6ZP82 1450 aa24.06■■□□□ 1.44
GSE1-214ENST00000574293 TSPY4P0CV99 314 aa24.03■■□□□ 1.44
GSE1-214ENST00000574293 TSPY10P0CW01 314 aa24.03■■□□□ 1.44
GSE1-214ENST00000574293 KIDINS220Q9ULH0 1771 aa24.03■■□□□ 1.44
GSE1-214ENST00000574293 ARHGEF5Q12774 1597 aa24.03■■□□□ 1.44
GSE1-214ENST00000574293 FAM50AQ14320 339 aaKnown RBP24.02■■□□□ 1.44
GSE1-214ENST00000574293 TCOF1Q13428 1488 aaKnown RBP24.01■■□□□ 1.43
GSE1-214ENST00000574293 ATP7AQ04656 1500 aa24.01■■□□□ 1.43
GSE1-214ENST00000574293 DIP2CQ9Y2E4 1556 aa24.01■■□□□ 1.43
GSE1-214ENST00000574293 ABCA6Q8N139 1617 aa24.01■■□□□ 1.43
GSE1-214ENST00000574293 C9orf84Q5VXU9 1444 aa24.01■■□□□ 1.43
GSE1-214ENST00000574293 KDM4FA0A1W2PPD8 638 aa23.99■■□□□ 1.43
GSE1-214ENST00000574293 INO80Q9ULG1 1556 aaPredicted RBP23.99■■□□□ 1.43
GSE1-214ENST00000574293 RTEL1-TNFRSF6BF6WH68 1400 aa23.97■■□□□ 1.43
GSE1-214ENST00000574293 MLECQ14165 292 aa23.95■■□□□ 1.42
GSE1-214ENST00000574293 SIGLEC1Q9BZZ2 1709 aa23.95■■□□□ 1.42
GSE1-214ENST00000574293 ABCC5O15440 1437 aa23.93■■□□□ 1.42
GSE1-214ENST00000574293 DAPK1P53355 1430 aa23.92■■□□□ 1.42
GSE1-214ENST00000574293 REREQ9P2R6 1566 aa23.91■■□□□ 1.42
GSE1-214ENST00000574293 DNMT1P26358 1616 aaKnown RBP23.9■■□□□ 1.42
GSE1-214ENST00000574293 A2MP01023 1474 aa23.89■■□□□ 1.42
GSE1-214ENST00000574293 CHIC2Q9UKJ5 165 aa23.89■■□□□ 1.41
GSE1-214ENST00000574293 MAST1Q9Y2H9 1570 aa23.89■■□□□ 1.41
GSE1-214ENST00000574293 BCORL1Q5H9F3 1711 aa23.88■■□□□ 1.41
GSE1-214ENST00000574293 AEBP2Q6ZN18 517 aaPredicted RBP23.87■■□□□ 1.41
GSE1-214ENST00000574293 ADGBQ8N7X0 1667 aa23.86■■□□□ 1.41
GSE1-214ENST00000574293 SHANK2Q9UPX8 1470 aa23.86■■□□□ 1.41
GSE1-214ENST00000574293 CROCC2H7BZ55 1655 aa23.86■■□□□ 1.41
GSE1-214ENST00000574293 DHX29Q7Z478 1369 aaKnown RBP23.85■■□□□ 1.41
GSE1-214ENST00000574293 AGLP35573 1532 aa23.84■■□□□ 1.41
GSE1-214ENST00000574293 ITGAEP38570 1179 aa23.84■■□□□ 1.41
GSE1-214ENST00000574293 ADAMTSL3P82987 1691 aa23.83■■□□□ 1.41
GSE1-214ENST00000574293 RRBP1Q9P2E9 1410 aaKnown RBP23.83■■□□□ 1.4
GSE1-214ENST00000574293 RRP7BPQ9NSQ0 103 aa23.82■■□□□ 1.4
GSE1-214ENST00000574293 PLXNC1O60486 1568 aa23.82■■□□□ 1.4
GSE1-214ENST00000574293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.81■■□□□ 1.42e-6■■■■■ 29.6
GSE1-214ENST00000574293 MADDQ8WXG6 1647 aa23.79■■□□□ 1.4
GSE1-214ENST00000574293 ANKRD30AQ9BXX3 1397 aa23.78■■□□□ 1.4
GSE1-214ENST00000574293 KIF3BO15066 747 aa23.78■■□□□ 1.4
GSE1-214ENST00000574293 GGT6Q6P531 493 aa23.78■■□□□ 1.4
GSE1-214ENST00000574293 KIF15Q9NS87 1388 aa23.78■■□□□ 1.4
GSE1-214ENST00000574293 PTPRKQ15262 1439 aa23.77■■□□□ 1.4
GSE1-214ENST00000574293 ESF1Q9H501 851 aaKnown RBP23.75■■□□□ 1.39
GSE1-214ENST00000574293 NCOA1Q15788 1441 aa23.75■■□□□ 1.39
GSE1-214ENST00000574293 DUOX2Q9NRD8 1548 aa23.74■■□□□ 1.39
GSE1-214ENST00000574293 RIMS1Q86UR5 1692 aaKnown RBP23.73■■□□□ 1.39
GSE1-214ENST00000574293 PLPPR3Q6T4P5 718 aa23.73■■□□□ 1.39
GSE1-214ENST00000574293 ADGRL2O95490 1459 aa23.73■■□□□ 1.39
GSE1-214ENST00000574293 FER1L4A9Z1Z3 1794 aa23.73■■□□□ 1.39
GSE1-214ENST00000574293 PTPRMP28827 1452 aa23.72■■□□□ 1.39
GSE1-214ENST00000574293 ERBINQ96RT1 1412 aa23.67■■□□□ 1.38
GSE1-214ENST00000574293 ROCK1Q13464 1354 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms