RNA–Protein interactions for RNA: ENST00000574224.1

ABCC1-205, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 1 (best)

Gene ABCC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-205ENST00000574224 ARAP3Q8WWN8 1544 aa18.5■□□□□ 0.55
ABCC1-205ENST00000574224 EHBP1L1Q8N3D4 1523 aa18.5■□□□□ 0.55
ABCC1-205ENST00000574224 CCNB3Q8WWL7 1395 aa18.49■□□□□ 0.55
ABCC1-205ENST00000574224 RAPGEF3O95398 923 aa18.48■□□□□ 0.55
ABCC1-205ENST00000574224 DENND4BO75064 1496 aaPredicted RBP18.47■□□□□ 0.55
ABCC1-205ENST00000574224 ADGRL1O94910 1474 aa18.47■□□□□ 0.55
ABCC1-205ENST00000574224 MYO5CQ9NQX4 1742 aa18.45■□□□□ 0.54
ABCC1-205ENST00000574224 ZNF777Q9ULD5 760 aaPredicted RBP18.44■□□□□ 0.54
ABCC1-205ENST00000574224 SCAPERQ9BY12 1400 aa18.44■□□□□ 0.54
ABCC1-205ENST00000574224 CFDP1Q9UEE9 299 aaPredicted RBP18.44■□□□□ 0.54
ABCC1-205ENST00000574224 RRBP1Q9P2E9 1410 aaKnown RBP18.41■□□□□ 0.54
ABCC1-205ENST00000574224 MYT1LQ9UL68 1186 aa18.4■□□□□ 0.54
ABCC1-205ENST00000574224 LRRC9Q6ZRR7 1453 aa18.4■□□□□ 0.54
ABCC1-205ENST00000574224 GPATCH8Q9UKJ3 1502 aaKnown RBP18.39■□□□□ 0.53
ABCC1-205ENST00000574224 PREX2Q70Z35 1606 aa18.39■□□□□ 0.53
ABCC1-205ENST00000574224 POGZQ7Z3K3 1410 aa18.39■□□□□ 0.53
ABCC1-205ENST00000574224 NCOA2Q15596 1464 aa18.38■□□□□ 0.53
ABCC1-205ENST00000574224 KANK4Q5T7N3 995 aaPredicted RBP18.36■□□□□ 0.53
ABCC1-205ENST00000574224 CCER1Q8TC90 406 aaPredicted RBP18.36■□□□□ 0.53
ABCC1-205ENST00000574224 ZNF518AQ6AHZ1 1483 aa18.36■□□□□ 0.53
ABCC1-205ENST00000574224 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
ABCC1-205ENST00000574224 FRMPD1Q5SYB0 1578 aa18.33■□□□□ 0.53
ABCC1-205ENST00000574224 AEBP2Q6ZN18 517 aaPredicted RBP18.33■□□□□ 0.53
ABCC1-205ENST00000574224 PLEKHH2Q8IVE3 1493 aa18.33■□□□□ 0.53
ABCC1-205ENST00000574224 AFAP1Q8N556 730 aa18.33■□□□□ 0.52
ABCC1-205ENST00000574224 ARID4BQ4LE39 1312 aaPredicted RBP18.32■□□□□ 0.52
ABCC1-205ENST00000574224 ABCC1P33527 1531 aa18.31■□□□□ 0.52
ABCC1-205ENST00000574224 MAGI2Q86UL8 1455 aa18.31■□□□□ 0.52
ABCC1-205ENST00000574224 CDC42BPAQ5VT25 1732 aa18.31■□□□□ 0.52
ABCC1-205ENST00000574224 CDC42BPBQ9Y5S2 1711 aa18.31■□□□□ 0.52
ABCC1-205ENST00000574224 ZMYM4Q5VZL5 1548 aa18.3■□□□□ 0.52
ABCC1-205ENST00000574224 ZFYVE16Q7Z3T8 1539 aa18.3■□□□□ 0.52
ABCC1-205ENST00000574224 ITSN2Q9NZM3 1697 aa18.3■□□□□ 0.52
ABCC1-205ENST00000574224 RICTORQ6R327 1708 aa18.29■□□□□ 0.52
ABCC1-205ENST00000574224 HNRNPMP52272 730 aaKnown RBP eCLIP18.28■□□□□ 0.52
ABCC1-205ENST00000574224 ARHGEF40Q8TER5 1519 aa18.28■□□□□ 0.52
ABCC1-205ENST00000574224 SYCP2Q9BX26 1530 aa18.28■□□□□ 0.52
ABCC1-205ENST00000574224 KIAA1107Q9UPP5 1409 aa18.28■□□□□ 0.52
ABCC1-205ENST00000574224 TRAPPC8Q9Y2L5 1435 aa18.28■□□□□ 0.52
ABCC1-205ENST00000574224 SAMD9LQ8IVG5 1584 aa18.27■□□□□ 0.51
ABCC1-205ENST00000574224 ZNF644Q9H582 1327 aaPredicted RBP18.26■□□□□ 0.51
ABCC1-205ENST00000574224 YEATS2Q9ULM3 1422 aa18.26■□□□□ 0.51
ABCC1-205ENST00000574224 SPAG9O60271 1321 aaKnown RBP18.25■□□□□ 0.51
ABCC1-205ENST00000574224 MYOM3Q5VTT5 1437 aa18.25■□□□□ 0.51
ABCC1-205ENST00000574224 ARHGEF12Q9NZN5 1544 aa18.25■□□□□ 0.51
ABCC1-205ENST00000574224 CAMSAP2Q08AD1 1489 aa18.23■□□□□ 0.51
ABCC1-205ENST00000574224 KDM5CP41229 1560 aa18.23■□□□□ 0.51
ABCC1-205ENST00000574224 HECW2Q9P2P5 1572 aa18.22■□□□□ 0.51
ABCC1-205ENST00000574224 KDM4FA0A1W2PPD8 638 aa18.22■□□□□ 0.51
ABCC1-205ENST00000574224 MIA2Q96PC5 1412 aa18.22■□□□□ 0.51
ABCC1-205ENST00000574224 MLH3Q9UHC1 1453 aa18.21■□□□□ 0.51
ABCC1-205ENST00000574224 C9orf84Q5VXU9 1444 aa18.21■□□□□ 0.51
ABCC1-205ENST00000574224 ATP10AO60312 1499 aa18.2■□□□□ 0.5
ABCC1-205ENST00000574224 RSPH4AQ5TD94 716 aa18.2■□□□□ 0.5
ABCC1-205ENST00000574224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.18■□□□□ 0.5
ABCC1-205ENST00000574224 TSPY4P0CV99 314 aa18.18■□□□□ 0.5
ABCC1-205ENST00000574224 TSPY10P0CW01 314 aa18.18■□□□□ 0.5
ABCC1-205ENST00000574224 CCDC141Q6ZP82 1450 aa18.18■□□□□ 0.5
ABCC1-205ENST00000574224 MBD5Q9P267 1494 aa18.16■□□□□ 0.5
ABCC1-205ENST00000574224 MLECQ14165 292 aa18.16■□□□□ 0.5
ABCC1-205ENST00000574224 CLSPNQ9HAW4 1339 aa18.14■□□□□ 0.49
ABCC1-205ENST00000574224 FGD6Q6ZV73 1430 aa18.14■□□□□ 0.49
ABCC1-205ENST00000574224 ATP7AQ04656 1500 aa18.14■□□□□ 0.49
ABCC1-205ENST00000574224 DIP2CQ9Y2E4 1556 aa18.13■□□□□ 0.49
ABCC1-205ENST00000574224 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
ABCC1-205ENST00000574224 ABCA6Q8N139 1617 aa18.11■□□□□ 0.49
ABCC1-205ENST00000574224 RTEL1-TNFRSF6BF6WH68 1400 aa18.1■□□□□ 0.49
ABCC1-205ENST00000574224 ESF1Q9H501 851 aaKnown RBP18.1■□□□□ 0.49
ABCC1-205ENST00000574224 ARHGEF5Q12774 1597 aa18.09■□□□□ 0.49
ABCC1-205ENST00000574224 INO80Q9ULG1 1556 aaPredicted RBP18.08■□□□□ 0.49
ABCC1-205ENST00000574224 PTPN23Q9H3S7 1636 aa18.08■□□□□ 0.48
ABCC1-205ENST00000574224 REREQ9P2R6 1566 aa18.07■□□□□ 0.48
ABCC1-205ENST00000574224 KIDINS220Q9ULH0 1771 aa18.07■□□□□ 0.48
ABCC1-205ENST00000574224 A2MP01023 1474 aa18.07■□□□□ 0.48
ABCC1-205ENST00000574224 TCOF1Q13428 1488 aaKnown RBP18.05■□□□□ 0.48
ABCC1-205ENST00000574224 BCORL1Q5H9F3 1711 aa18.05■□□□□ 0.48
ABCC1-205ENST00000574224 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
ABCC1-205ENST00000574224 AGLP35573 1532 aa18.04■□□□□ 0.48
ABCC1-205ENST00000574224 DAPK1P53355 1430 aa18.02■□□□□ 0.48
ABCC1-205ENST00000574224 DHX57Q6P158 1386 aaKnown RBP18.02■□□□□ 0.47
ABCC1-205ENST00000574224 DHX29Q7Z478 1369 aaKnown RBP18.02■□□□□ 0.47
ABCC1-205ENST00000574224 PTPRMP28827 1452 aa18.02■□□□□ 0.47
ABCC1-205ENST00000574224 MADDQ8WXG6 1647 aa18.01■□□□□ 0.47
ABCC1-205ENST00000574224 ABCC5O15440 1437 aa18.01■□□□□ 0.47
ABCC1-205ENST00000574224 ADAMTSL3P82987 1691 aa18.01■□□□□ 0.47
ABCC1-205ENST00000574224 GGT6Q6P531 493 aa18.01■□□□□ 0.47
ABCC1-205ENST00000574224 SHANK2Q9UPX8 1470 aa18■□□□□ 0.47
ABCC1-205ENST00000574224 SETD5Q9C0A6 1442 aa18■□□□□ 0.47
ABCC1-205ENST00000574224 CHIC2Q9UKJ5 165 aa17.99■□□□□ 0.47
ABCC1-205ENST00000574224 SIGLEC1Q9BZZ2 1709 aa17.99■□□□□ 0.47
ABCC1-205ENST00000574224 KIF3BO15066 747 aa17.98■□□□□ 0.47
ABCC1-205ENST00000574224 ADGBQ8N7X0 1667 aa17.98■□□□□ 0.47
ABCC1-205ENST00000574224 ANKRD30AQ9BXX3 1397 aa17.98■□□□□ 0.47
ABCC1-205ENST00000574224 KIF15Q9NS87 1388 aa17.97■□□□□ 0.47
ABCC1-205ENST00000574224 PLXNC1O60486 1568 aa17.97■□□□□ 0.47
ABCC1-205ENST00000574224 MAST1Q9Y2H9 1570 aa17.97■□□□□ 0.47
ABCC1-205ENST00000574224 RRP7BPQ9NSQ0 103 aa17.97■□□□□ 0.47
ABCC1-205ENST00000574224 RAB3GAP2Q9H2M9 1393 aa17.96■□□□□ 0.47
ABCC1-205ENST00000574224 DNMT1P26358 1616 aaKnown RBP17.96■□□□□ 0.47
ABCC1-205ENST00000574224 RIMS1Q86UR5 1692 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms