RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 POGZQ7Z3K3 1410 aa36.37■■■■□ 3.41
SNF8-216ENST00000573795 ATP1B4Q9UN42 357 aaPredicted RBP36.37■■■■□ 3.41
SNF8-216ENST00000573795 MAGI2Q86UL8 1455 aa36.36■■■■□ 3.41
SNF8-216ENST00000573795 SCAPERQ9BY12 1400 aa36.35■■■■□ 3.41
SNF8-216ENST00000573795 TROQ12816 1431 aaPredicted RBP36.3■■■■□ 3.4
SNF8-216ENST00000573795 PCF11O94913 1555 aaKnown RBP36.3■■■■□ 3.4
SNF8-216ENST00000573795 LMTK3Q96Q04 1460 aa36.28■■■■□ 3.4
SNF8-216ENST00000573795 CDK11AQ9UQ88 783 aaPredicted RBP36.26■■■■□ 3.4
SNF8-216ENST00000573795 EFCAB2Q5VUJ9 269 aa36.23■■■■□ 3.39
SNF8-216ENST00000573795 ARHGAP5Q13017 1502 aa36.18■■■■□ 3.38
SNF8-216ENST00000573795 CLIP1P30622 1438 aa36.18■■■■□ 3.38
SNF8-216ENST00000573795 FER1L4A9Z1Z3 1794 aa36.18■■■■□ 3.38
SNF8-216ENST00000573795 ATP10AO60312 1499 aa36.17■■■■□ 3.38
SNF8-216ENST00000573795 CDC42BPBQ9Y5S2 1711 aa36.17■■■■□ 3.38
SNF8-216ENST00000573795 KDM5CP41229 1560 aa36.16■■■■□ 3.38
SNF8-216ENST00000573795 CASKIN1Q8WXD9 1431 aa36.16■■■■□ 3.38
SNF8-216ENST00000573795 C9orf84Q5VXU9 1444 aa36.14■■■■□ 3.38
SNF8-216ENST00000573795 ZNF518AQ6AHZ1 1483 aa36.13■■■■□ 3.37
SNF8-216ENST00000573795 ARHGEF12Q9NZN5 1544 aa36.13■■■■□ 3.37
SNF8-216ENST00000573795 MLECQ14165 292 aa36.11■■■■□ 3.37
SNF8-216ENST00000573795 CCDC18Q5T9S5 1454 aa36.11■■■■□ 3.37
SNF8-216ENST00000573795 PREX2Q70Z35 1606 aa36.1■■■■□ 3.37
SNF8-216ENST00000573795 AFAP1Q8N556 730 aa36.06■■■■□ 3.36
SNF8-216ENST00000573795 PLPPR3Q6T4P5 718 aa36.05■■■■□ 3.36
SNF8-216ENST00000573795 DIP2CQ9Y2E4 1556 aa36.04■■■■□ 3.36
SNF8-216ENST00000573795 ABCC1P33527 1531 aa36.03■■■■□ 3.36
SNF8-216ENST00000573795 FYCO1Q9BQS8 1478 aa36.01■■■■□ 3.36
SNF8-216ENST00000573795 CDC42BPAQ5VT25 1732 aa36■■■■□ 3.35
SNF8-216ENST00000573795 HSPA2P54652 639 aa36■■■■□ 3.35
SNF8-216ENST00000573795 ABCA6Q8N139 1617 aa36■■■■□ 3.35
SNF8-216ENST00000573795 ITSN2Q9NZM3 1697 aa35.99■■■■□ 3.35
SNF8-216ENST00000573795 REREQ9P2R6 1566 aa35.98■■■■□ 3.35
SNF8-216ENST00000573795 TRAPPC8Q9Y2L5 1435 aa35.96■■■■□ 3.35
SNF8-216ENST00000573795 MLH3Q9UHC1 1453 aa35.96■■■■□ 3.35
SNF8-216ENST00000573795 FBXO41Q8TF61 875 aa35.93■■■■□ 3.34
SNF8-216ENST00000573795 PREX1Q8TCU6 1659 aa35.89■■■■□ 3.34
SNF8-216ENST00000573795 KIDINS220Q9ULH0 1771 aa35.87■■■■□ 3.33
SNF8-216ENST00000573795 CEBPAP49715 358 aaPredicted RBP35.85■■■■□ 3.33
SNF8-216ENST00000573795 AGLP35573 1532 aa35.84■■■■□ 3.33
SNF8-216ENST00000573795 SAMD9LQ8IVG5 1584 aa35.84■■■■□ 3.33
SNF8-216ENST00000573795 MYT1LQ9UL68 1186 aa35.83■■■■□ 3.33
SNF8-216ENST00000573795 GPATCH8Q9UKJ3 1502 aaKnown RBP35.81■■■■□ 3.32
SNF8-216ENST00000573795 C3P01024 1663 aa35.77■■■■□ 3.32
SNF8-216ENST00000573795 SYCP2Q9BX26 1530 aa35.77■■■■□ 3.32
SNF8-216ENST00000573795 SETD1BQ9UPS6 1966 aaKnown RBP35.71■■■■□ 3.31
SNF8-216ENST00000573795 STRCQ7RTU9 1775 aa35.69■■■■□ 3.3
SNF8-216ENST00000573795 ZNF777Q9ULD5 760 aaPredicted RBP35.69■■■■□ 3.3
SNF8-216ENST00000573795 UHRF1BP1Q6BDS2 1440 aa35.67■■■■□ 3.3
SNF8-216ENST00000573795 INO80Q9ULG1 1556 aaPredicted RBP35.64■■■■□ 3.3
SNF8-216ENST00000573795 HNRNPMP52272 730 aaKnown RBP eCLIP35.63■■■■□ 3.29
SNF8-216ENST00000573795 KIAA1107Q9UPP5 1409 aa35.63■■■■□ 3.29
SNF8-216ENST00000573795 ATP7AQ04656 1500 aa35.61■■■■□ 3.29
SNF8-216ENST00000573795 CCNB3Q8WWL7 1395 aa35.6■■■■□ 3.29
SNF8-216ENST00000573795 SPAG9O60271 1321 aaKnown RBP35.59■■■■□ 3.29
SNF8-216ENST00000573795 MTUS2Q5JR59 1369 aa35.59■■■■□ 3.29
SNF8-216ENST00000573795 PLEKHH2Q8IVE3 1493 aa35.59■■■■□ 3.29
SNF8-216ENST00000573795 TIAM1Q13009 1591 aa35.59■■■■□ 3.29
SNF8-216ENST00000573795 SUPT6HQ7KZ85 1726 aaKnown RBP35.58■■■■□ 3.29
SNF8-216ENST00000573795 CFDP1Q9UEE9 299 aaPredicted RBP35.58■■■■□ 3.29
SNF8-216ENST00000573795 PLXNC1O60486 1568 aa35.58■■■■□ 3.29
SNF8-216ENST00000573795 CNTLNQ9NXG0 1405 aa35.57■■■■□ 3.29
SNF8-216ENST00000573795 MROH2AA6NES4 1674 aa35.56■■■■□ 3.28
SNF8-216ENST00000573795 CERKQ8TCT0 537 aa35.56■■■■□ 3.28
SNF8-216ENST00000573795 EHBP1L1Q8N3D4 1523 aa35.55■■■■□ 3.28
SNF8-216ENST00000573795 ESF1Q9H501 851 aaKnown RBP35.53■■■■□ 3.28
SNF8-216ENST00000573795 CEP162Q5TB80 1403 aa35.52■■■■□ 3.28
SNF8-216ENST00000573795 A2MP01023 1474 aa35.48■■■■□ 3.27
SNF8-216ENST00000573795 ZNF644Q9H582 1327 aaPredicted RBP35.46■■■■□ 3.27
SNF8-216ENST00000573795 MBD5Q9P267 1494 aa35.46■■■■□ 3.27
SNF8-216ENST00000573795 CLTCQ00610 1675 aaKnown RBP35.45■■■■□ 3.27
SNF8-216ENST00000573795 DMRT2Q9Y5R5 561 aa35.44■■■■□ 3.26
SNF8-216ENST00000573795 ADGBQ8N7X0 1667 aa35.43■■■■□ 3.26
SNF8-216ENST00000573795 NPATQ14207 1427 aa35.43■■■■□ 3.26
SNF8-216ENST00000573795 ZMYM3Q14202 1370 aa35.42■■■■□ 3.26
SNF8-216ENST00000573795 PTPRTO14522 1441 aa35.41■■■■□ 3.26
SNF8-216ENST00000573795 NCOA1Q15788 1441 aa35.39■■■■□ 3.26
SNF8-216ENST00000573795 CAMSAP1Q5T5Y3 1602 aa35.32■■■■□ 3.25
SNF8-216ENST00000573795 MYO3AQ8NEV4 1616 aa35.32■■■■□ 3.25
SNF8-216ENST00000573795 NCOA2Q15596 1464 aa35.32■■■■□ 3.24
SNF8-216ENST00000573795 RTEL1-TNFRSF6BF6WH68 1400 aa35.32■■■■□ 3.24
SNF8-216ENST00000573795 ZNF142P52746 1687 aaPredicted RBP35.31■■■■□ 3.24
SNF8-216ENST00000573795 PTPRKQ15262 1439 aa35.31■■■■□ 3.24
SNF8-216ENST00000573795 GGT6Q6P531 493 aa35.29■■■■□ 3.24
SNF8-216ENST00000573795 LTBP4Q8N2S1 1624 aa35.28■■■■□ 3.24
SNF8-216ENST00000573795 CAMSAP2Q08AD1 1489 aa35.27■■■■□ 3.24
SNF8-216ENST00000573795 CCDC141Q6ZP82 1450 aa35.25■■■■□ 3.23
SNF8-216ENST00000573795 CEP170BQ9Y4F5 1589 aaPredicted RBP35.23■■■■□ 3.23
SNF8-216ENST00000573795 DHX29Q7Z478 1369 aaKnown RBP35.23■■■■□ 3.23
SNF8-216ENST00000573795 PPP6R1Q9UPN7 881 aa35.2■■■■□ 3.23
SNF8-216ENST00000573795 PLA2R1Q13018 1463 aa35.16■■■■□ 3.22
SNF8-216ENST00000573795 VPS8Q8N3P4 1428 aa35.16■■■■□ 3.22
SNF8-216ENST00000573795 ARHGEF5Q12774 1597 aa35.16■■■■□ 3.22
SNF8-216ENST00000573795 NCKAP5LQ9HCH0 1330 aa35.14■■■■□ 3.22
SNF8-216ENST00000573795 TCOF1Q13428 1488 aaKnown RBP35.13■■■■□ 3.21
SNF8-216ENST00000573795 LRRC9Q6ZRR7 1453 aa35.13■■■■□ 3.21
SNF8-216ENST00000573795 LOC105371045A0A1W2PR82 267 aa35.1■■■■□ 3.21
SNF8-216ENST00000573795 IQSEC2Q5JU85 1478 aa35.09■■■■□ 3.21
SNF8-216ENST00000573795 KDM5DQ9BY66 1539 aa35.08■■■■□ 3.21
SNF8-216ENST00000573795 FAM135AQ9P2D6 1515 aa35.08■■■■□ 3.21
SNF8-216ENST00000573795 RSPH4AQ5TD94 716 aa35.08■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms