RNA–Protein interactions for RNA: ENST00000573674.1

SLC52A1-204, Transcript of solute carrier family 52 member 1, humanhuman

TSL 2

Gene SLC52A1, Length 2,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-204ENST00000573674 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
SLC52A1-204ENST00000573674 NUP153P49790 1475 aaKnown RBP20.28■□□□□ 0.84
SLC52A1-204ENST00000573674 JPH4Q96JJ6 628 aa20.28■□□□□ 0.84
SLC52A1-204ENST00000573674 NUP160Q12769 1436 aa20.28■□□□□ 0.84
SLC52A1-204ENST00000573674 NOP58Q9Y2X3 529 aaKnown RBP20.27■□□□□ 0.84
SLC52A1-204ENST00000573674 PTPN23Q9H3S7 1636 aa20.27■□□□□ 0.83
SLC52A1-204ENST00000573674 ANO8Q9HCE9 1232 aaPredicted RBP20.25■□□□□ 0.83
SLC52A1-204ENST00000573674 RAPGEF6Q8TEU7 1601 aa20.24■□□□□ 0.83
SLC52A1-204ENST00000573674 PLB1Q6P1J6 1458 aa20.23■□□□□ 0.83
SLC52A1-204ENST00000573674 HFM1A2PYH4 1435 aa20.22■□□□□ 0.83
SLC52A1-204ENST00000573674 CHIC2Q9UKJ5 165 aa20.21■□□□□ 0.83
SLC52A1-204ENST00000573674 B4GALNT3Q6L9W6 998 aa20.2■□□□□ 0.82
SLC52A1-204ENST00000573674 KDM5BQ9UGL1 1544 aa20.2■□□□□ 0.82
SLC52A1-204ENST00000573674 NAIPQ13075 1403 aa20.19■□□□□ 0.82
SLC52A1-204ENST00000573674 TCOF1Q13428 1488 aaKnown RBP20.19■□□□□ 0.82
SLC52A1-204ENST00000573674 RRP7BPQ9NSQ0 103 aa20.18■□□□□ 0.82
SLC52A1-204ENST00000573674 CARMIL2Q6F5E8 1435 aa20.18■□□□□ 0.82
SLC52A1-204ENST00000573674 PAK3O75914 559 aaPredicted RBP20.18■□□□□ 0.82
SLC52A1-204ENST00000573674 UACAQ9BZF9 1416 aa20.17■□□□□ 0.82
SLC52A1-204ENST00000573674 NBR1Q14596 966 aa20.16■□□□□ 0.82
SLC52A1-204ENST00000573674 WASHC2AQ641Q2 1341 aa20.16■□□□□ 0.82
SLC52A1-204ENST00000573674 PRG4Q92954 1404 aaPredicted RBP20.15■□□□□ 0.82
SLC52A1-204ENST00000573674 MIA2Q96PC5 1412 aa20.14■□□□□ 0.82
SLC52A1-204ENST00000573674 ZNF644Q9H582 1327 aaPredicted RBP20.13■□□□□ 0.81
SLC52A1-204ENST00000573674 ZBED9Q6R2W3 1325 aa20.13■□□□□ 0.81
SLC52A1-204ENST00000573674 CNTLNQ9NXG0 1405 aa20.11■□□□□ 0.81
SLC52A1-204ENST00000573674 CCDC184Q52MB2 194 aa20.11■□□□□ 0.81
SLC52A1-204ENST00000573674 HSPA5P11021 654 aaKnown RBP20.09■□□□□ 0.81
SLC52A1-204ENST00000573674 TROQ12816 1431 aaPredicted RBP20.08■□□□□ 0.81
SLC52A1-204ENST00000573674 IPO9Q96P70 1041 aaKnown RBP20.06■□□□□ 0.8
SLC52A1-204ENST00000573674 KDM6BO15054 1643 aa20.05■□□□□ 0.8
SLC52A1-204ENST00000573674 CHD1O14646 1710 aa20.04■□□□□ 0.8
SLC52A1-204ENST00000573674 KIF14Q15058 1648 aa20.04■□□□□ 0.8
SLC52A1-204ENST00000573674 PRKRIP1Q9H875 184 aaPredicted RBP20.03■□□□□ 0.8
SLC52A1-204ENST00000573674 ABCA8O94911 1581 aa20.03■□□□□ 0.8
SLC52A1-204ENST00000573674 ANP32AP39687 249 aaKnown RBP20.03■□□□□ 0.8
SLC52A1-204ENST00000573674 DAPK1P53355 1430 aa20.03■□□□□ 0.8
SLC52A1-204ENST00000573674 RTL5Q5HYW3 569 aaPredicted RBP20.02■□□□□ 0.8
SLC52A1-204ENST00000573674 FAM9BQ8IZU0 186 aa20.02■□□□□ 0.8
SLC52A1-204ENST00000573674 ABCC5O15440 1437 aa20.02■□□□□ 0.8
SLC52A1-204ENST00000573674 CFDP1Q9UEE9 299 aaPredicted RBP20.01■□□□□ 0.79
SLC52A1-204ENST00000573674 ATP10BO94823 1461 aa20.01■□□□□ 0.79
SLC52A1-204ENST00000573674 GCC2Q8IWJ2 1684 aa20.01■□□□□ 0.79
SLC52A1-204ENST00000573674 SALL2Q9Y467 1007 aaPredicted RBP20■□□□□ 0.79
SLC52A1-204ENST00000573674 EIF4G2P78344 907 aaKnown RBP eCLIP20■□□□□ 0.79
SLC52A1-204ENST00000573674 MRS2Q9HD23 443 aa20■□□□□ 0.79
SLC52A1-204ENST00000573674 ZNF777Q9ULD5 760 aaPredicted RBP20■□□□□ 0.79
SLC52A1-204ENST00000573674 PTPRGP23470 1445 aa19.99■□□□□ 0.79
SLC52A1-204ENST00000573674 AKNAQ7Z591 1439 aa19.99■□□□□ 0.79
SLC52A1-204ENST00000573674 GPATCH8Q9UKJ3 1502 aaKnown RBP19.99■□□□□ 0.79
SLC52A1-204ENST00000573674 PLEKHD1A6NEE1 506 aa19.98■□□□□ 0.79
SLC52A1-204ENST00000573674 ZBTB47Q9UFB7 747 aaPredicted RBP19.98■□□□□ 0.79
SLC52A1-204ENST00000573674 NCOA1Q15788 1441 aa19.98■□□□□ 0.79
SLC52A1-204ENST00000573674 SMG6Q86US8 1419 aaKnown RBP19.98■□□□□ 0.79
SLC52A1-204ENST00000573674 DNMT1P26358 1616 aaKnown RBP19.97■□□□□ 0.79
SLC52A1-204ENST00000573674 DENND4BO75064 1496 aaPredicted RBP19.96■□□□□ 0.79
SLC52A1-204ENST00000573674 CCDC7Q96M83 1385 aa19.96■□□□□ 0.79
SLC52A1-204ENST00000573674 RNF123Q5XPI4 1314 aa19.96■□□□□ 0.79
SLC52A1-204ENST00000573674 CAMSAP2Q08AD1 1489 aa19.95■□□□□ 0.78
SLC52A1-204ENST00000573674 ADCY10Q96PN6 1610 aa19.95■□□□□ 0.78
SLC52A1-204ENST00000573674 ROCK1Q13464 1354 aa19.93■□□□□ 0.78
SLC52A1-204ENST00000573674 C11orf95C9JLR9 678 aaPredicted RBP19.92■□□□□ 0.78
SLC52A1-204ENST00000573674 FOXD1Q16676 465 aa19.92■□□□□ 0.78
SLC52A1-204ENST00000573674 MPHOSPH9Q99550 1183 aa19.92■□□□□ 0.78
SLC52A1-204ENST00000573674 ERCC6L2Q5T890 1561 aa19.91■□□□□ 0.78
SLC52A1-204ENST00000573674 CCDC136Q96JN2 1154 aa19.91■□□□□ 0.78
SLC52A1-204ENST00000573674 ITSN2Q9NZM3 1697 aa19.91■□□□□ 0.78
SLC52A1-204ENST00000573674 IL27Q8NEV9 243 aa19.91■□□□□ 0.78
SLC52A1-204ENST00000573674 ABCC10Q5T3U5 1492 aa19.89■□□□□ 0.77
SLC52A1-204ENST00000573674 NUDCQ9Y266 331 aa19.88■□□□□ 0.77
SLC52A1-204ENST00000573674 SHROOM2Q13796 1616 aa19.87■□□□□ 0.77
SLC52A1-204ENST00000573674 CDC42BPAQ5VT25 1732 aa19.86■□□□□ 0.77
SLC52A1-204ENST00000573674 POLR1AO95602 1720 aaPredicted RBP19.83■□□□□ 0.76
SLC52A1-204ENST00000573674 USP35Q9P2H5 1018 aa19.81■□□□□ 0.76
SLC52A1-204ENST00000573674 L3MBTL2Q969R5 705 aa19.8■□□□□ 0.76
SLC52A1-204ENST00000573674 SLC4A1APQ9BWU0 796 aaKnown RBP19.8■□□□□ 0.76
SLC52A1-204ENST00000573674 KIF7Q2M1P5 1343 aa19.79■□□□□ 0.76
SLC52A1-204ENST00000573674 UBE2Q2Q8WVN8 375 aa19.79■□□□□ 0.76
SLC52A1-204ENST00000573674 HNRNPMP52272 730 aaKnown RBP eCLIP19.79■□□□□ 0.76
SLC52A1-204ENST00000573674 CROCC2H7BZ55 1655 aa19.78■□□□□ 0.76
SLC52A1-204ENST00000573674 SPATA31E1Q6ZUB1 1445 aa19.78■□□□□ 0.76
SLC52A1-204ENST00000573674 WASHC2CQ9Y4E1 1318 aa19.77■□□□□ 0.76
SLC52A1-204ENST00000573674 ADGRL2O95490 1459 aa19.77■□□□□ 0.75
SLC52A1-204ENST00000573674 ANKRD30AQ9BXX3 1397 aa19.76■□□□□ 0.75
SLC52A1-204ENST00000573674 RTN4Q9NQC3 1192 aaKnown RBP19.76■□□□□ 0.75
SLC52A1-204ENST00000573674 ADGBQ8N7X0 1667 aa19.76■□□□□ 0.75
SLC52A1-204ENST00000573674 CLASP1Q7Z460 1538 aa19.76■□□□□ 0.75
SLC52A1-204ENST00000573674 ANKRD30BQ9BXX2 1392 aa19.75■□□□□ 0.75
SLC52A1-204ENST00000573674 ABCC2Q92887 1545 aa19.74■□□□□ 0.75
SLC52A1-204ENST00000573674 C9orf84Q5VXU9 1444 aa19.74■□□□□ 0.75
SLC52A1-204ENST00000573674 NEFMP07197 916 aa19.74■□□□□ 0.75
SLC52A1-204ENST00000573674 PZPP20742 1482 aa19.73■□□□□ 0.75
SLC52A1-204ENST00000573674 DHX29Q7Z478 1369 aaKnown RBP19.73■□□□□ 0.75
SLC52A1-204ENST00000573674 TCERG1O14776 1098 aaKnown RBP19.72■□□□□ 0.75
SLC52A1-204ENST00000573674 NBPF8Q3BBV2 869 aa19.72■□□□□ 0.75
SLC52A1-204ENST00000573674 TSPY4P0CV99 314 aa19.71■□□□□ 0.75
SLC52A1-204ENST00000573674 TSPY10P0CW01 314 aa19.71■□□□□ 0.75
SLC52A1-204ENST00000573674 ANKRD50Q9ULJ7 1429 aa19.71■□□□□ 0.75
SLC52A1-204ENST00000573674 CDC42BPBQ9Y5S2 1711 aa19.7■□□□□ 0.74
SLC52A1-204ENST00000573674 TEX14Q8IWB6 1497 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms