RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 TTC37Q6PGP7 1564 aa14.64□□□□□ -0.07
NDE1-207ENST00000573203 CASKIN1Q8WXD9 1431 aa14.64□□□□□ -0.07
NDE1-207ENST00000573203 C1QBPQ07021 282 aaKnown RBP14.63□□□□□ -0.07
NDE1-207ENST00000573203 CFAP74Q9C0B2 1584 aa14.62□□□□□ -0.07
NDE1-207ENST00000573203 CCDC18Q5T9S5 1454 aa14.61□□□□□ -0.07
NDE1-207ENST00000573203 FYCO1Q9BQS8 1478 aa14.61□□□□□ -0.07
NDE1-207ENST00000573203 TROQ12816 1431 aaPredicted RBP14.6□□□□□ -0.07
NDE1-207ENST00000573203 KIF14Q15058 1648 aa14.6□□□□□ -0.07
NDE1-207ENST00000573203 FANCAO15360 1455 aa14.59□□□□□ -0.07
NDE1-207ENST00000573203 MYO5CQ9NQX4 1742 aa14.58□□□□□ -0.07
NDE1-207ENST00000573203 KDM4FA0A1W2PPD8 638 aa14.58□□□□□ -0.08
NDE1-207ENST00000573203 RAPGEF3O95398 923 aa14.58□□□□□ -0.08
NDE1-207ENST00000573203 CEP162Q5TB80 1403 aa14.58□□□□□ -0.08
NDE1-207ENST00000573203 AKNAQ7Z591 1439 aa14.58□□□□□ -0.08
NDE1-207ENST00000573203 PLCH2O75038 1416 aa14.56□□□□□ -0.08
NDE1-207ENST00000573203 DENND4BO75064 1496 aaPredicted RBP14.56□□□□□ -0.08
NDE1-207ENST00000573203 ADGRL1O94910 1474 aa14.56□□□□□ -0.08
NDE1-207ENST00000573203 LOC105371045A0A1W2PR82 267 aa14.55□□□□□ -0.08
NDE1-207ENST00000573203 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
NDE1-207ENST00000573203 SLC4A1APQ9BWU0 796 aaKnown RBP14.55□□□□□ -0.08
NDE1-207ENST00000573203 FRMPD1Q5SYB0 1578 aa14.55□□□□□ -0.08
NDE1-207ENST00000573203 RICTORQ6R327 1708 aa14.54□□□□□ -0.08
NDE1-207ENST00000573203 EFCAB2Q5VUJ9 269 aa14.52□□□□□ -0.09
NDE1-207ENST00000573203 SLC4A2P04920 1241 aa14.51□□□□□ -0.09
NDE1-207ENST00000573203 ARHGAP5Q13017 1502 aa14.51□□□□□ -0.09
NDE1-207ENST00000573203 SCAPERQ9BY12 1400 aa14.49□□□□□ -0.09
NDE1-207ENST00000573203 CDC42BPBQ9Y5S2 1711 aa14.49□□□□□ -0.09
NDE1-207ENST00000573203 PREX2Q70Z35 1606 aa14.48□□□□□ -0.09
NDE1-207ENST00000573203 ARHGEF40Q8TER5 1519 aa14.47□□□□□ -0.09
NDE1-207ENST00000573203 CDC42BPAQ5VT25 1732 aa14.46□□□□□ -0.09
NDE1-207ENST00000573203 ZMYM4Q5VZL5 1548 aa14.46□□□□□ -0.09
NDE1-207ENST00000573203 POGZQ7Z3K3 1410 aa14.46□□□□□ -0.09
NDE1-207ENST00000573203 MTUS2Q5JR59 1369 aa14.46□□□□□ -0.1
NDE1-207ENST00000573203 ZFYVE16Q7Z3T8 1539 aa14.45□□□□□ -0.1
NDE1-207ENST00000573203 ARID4BQ4LE39 1312 aaPredicted RBP14.44□□□□□ -0.1
NDE1-207ENST00000573203 MAGI2Q86UL8 1455 aa14.44□□□□□ -0.1
NDE1-207ENST00000573203 U3KPZ7 1027 aaPredicted RBP14.43□□□□□ -0.1
NDE1-207ENST00000573203 ZNF518AQ6AHZ1 1483 aa14.42□□□□□ -0.1
NDE1-207ENST00000573203 VPS8Q8N3P4 1428 aa14.41□□□□□ -0.1
NDE1-207ENST00000573203 YEATS2Q9ULM3 1422 aa14.41□□□□□ -0.1
NDE1-207ENST00000573203 EHBP1L1Q8N3D4 1523 aa14.41□□□□□ -0.1
NDE1-207ENST00000573203 BCORL1Q5H9F3 1711 aa14.41□□□□□ -0.1
NDE1-207ENST00000573203 ABCC1P33527 1531 aa14.41□□□□□ -0.1
NDE1-207ENST00000573203 ITSN2Q9NZM3 1697 aa14.4□□□□□ -0.1
NDE1-207ENST00000573203 CCNB3Q8WWL7 1395 aa14.4□□□□□ -0.1
NDE1-207ENST00000573203 MYT1LQ9UL68 1186 aa14.4□□□□□ -0.1
NDE1-207ENST00000573203 GPATCH8Q9UKJ3 1502 aaKnown RBP14.4□□□□□ -0.1
NDE1-207ENST00000573203 ADAMTSL3P82987 1691 aa14.39□□□□□ -0.11
NDE1-207ENST00000573203 AFAP1Q8N556 730 aa14.39□□□□□ -0.11
NDE1-207ENST00000573203 ZNF777Q9ULD5 760 aaPredicted RBP14.39□□□□□ -0.11
NDE1-207ENST00000573203 KDM5CP41229 1560 aa14.39□□□□□ -0.11
NDE1-207ENST00000573203 CFDP1Q9UEE9 299 aaPredicted RBP14.37□□□□□ -0.11
NDE1-207ENST00000573203 TIAM1Q13009 1591 aa14.37□□□□□ -0.11
NDE1-207ENST00000573203 SAMD9LQ8IVG5 1584 aa14.37□□□□□ -0.11
NDE1-207ENST00000573203 HECW2Q9P2P5 1572 aa14.37□□□□□ -0.11
NDE1-207ENST00000573203 ATP10AO60312 1499 aa14.37□□□□□ -0.11
NDE1-207ENST00000573203 ARHGEF12Q9NZN5 1544 aa14.36□□□□□ -0.11
NDE1-207ENST00000573203 TRAPPC8Q9Y2L5 1435 aa14.36□□□□□ -0.11
NDE1-207ENST00000573203 SUPT6HQ7KZ85 1726 aaKnown RBP14.35□□□□□ -0.11
NDE1-207ENST00000573203 SIGLEC1Q9BZZ2 1709 aa14.35□□□□□ -0.11
NDE1-207ENST00000573203 MADDQ8WXG6 1647 aa14.35□□□□□ -0.11
NDE1-207ENST00000573203 C9orf84Q5VXU9 1444 aa14.34□□□□□ -0.11
NDE1-207ENST00000573203 SYCP2Q9BX26 1530 aa14.34□□□□□ -0.11
NDE1-207ENST00000573203 PLEKHH2Q8IVE3 1493 aa14.33□□□□□ -0.12
NDE1-207ENST00000573203 MLH3Q9UHC1 1453 aa14.33□□□□□ -0.12
NDE1-207ENST00000573203 PTPRMP28827 1452 aa14.32□□□□□ -0.12
NDE1-207ENST00000573203 DIP2CQ9Y2E4 1556 aa14.32□□□□□ -0.12
NDE1-207ENST00000573203 HNRNPMP52272 730 aaKnown RBP eCLIP14.32□□□□□ -0.12
NDE1-207ENST00000573203 MLECQ14165 292 aa14.32□□□□□ -0.12
NDE1-207ENST00000573203 RIMS1Q86UR5 1692 aaKnown RBP14.32□□□□□ -0.12
NDE1-207ENST00000573203 NCOA2Q15596 1464 aa14.31□□□□□ -0.12
NDE1-207ENST00000573203 ABCA6Q8N139 1617 aa14.31□□□□□ -0.12
NDE1-207ENST00000573203 KIAA1107Q9UPP5 1409 aa14.31□□□□□ -0.12
NDE1-207ENST00000573203 LRRC9Q6ZRR7 1453 aa14.31□□□□□ -0.12
NDE1-207ENST00000573203 KIDINS220Q9ULH0 1771 aa14.3□□□□□ -0.12
NDE1-207ENST00000573203 MAP3K1Q13233 1512 aa14.3□□□□□ -0.12
NDE1-207ENST00000573203 FER1L4A9Z1Z3 1794 aa14.29□□□□□ -0.12
NDE1-207ENST00000573203 SPAG9O60271 1321 aaKnown RBP14.28□□□□□ -0.12
NDE1-207ENST00000573203 APLP2Q06481 763 aa14.28□□□□□ -0.12
NDE1-207ENST00000573203 ZNF644Q9H582 1327 aaPredicted RBP14.28□□□□□ -0.12
NDE1-207ENST00000573203 REREQ9P2R6 1566 aa14.28□□□□□ -0.12
NDE1-207ENST00000573203 KANK4Q5T7N3 995 aaPredicted RBP14.26□□□□□ -0.13
NDE1-207ENST00000573203 ATP7AQ04656 1500 aa14.25□□□□□ -0.13
NDE1-207ENST00000573203 INO80Q9ULG1 1556 aaPredicted RBP14.25□□□□□ -0.13
NDE1-207ENST00000573203 AGLP35573 1532 aa14.24□□□□□ -0.13
NDE1-207ENST00000573203 CAMSAP2Q08AD1 1489 aa14.24□□□□□ -0.13
NDE1-207ENST00000573203 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
NDE1-207ENST00000573203 MBD5Q9P267 1494 aa14.23□□□□□ -0.13
NDE1-207ENST00000573203 CCDC141Q6ZP82 1450 aa14.2□□□□□ -0.14
NDE1-207ENST00000573203 MYCNP04198 464 aaPredicted RBP14.2□□□□□ -0.14
NDE1-207ENST00000573203 ESF1Q9H501 851 aaKnown RBP14.2□□□□□ -0.14
NDE1-207ENST00000573203 ADGBQ8N7X0 1667 aa14.2□□□□□ -0.14
NDE1-207ENST00000573203 A2MP01023 1474 aa14.19□□□□□ -0.14
NDE1-207ENST00000573203 RSPH4AQ5TD94 716 aa14.19□□□□□ -0.14
NDE1-207ENST00000573203 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
NDE1-207ENST00000573203 RTEL1-TNFRSF6BF6WH68 1400 aa14.18□□□□□ -0.14
NDE1-207ENST00000573203 MYOM3Q5VTT5 1437 aa14.18□□□□□ -0.14
NDE1-207ENST00000573203 ARHGEF5Q12774 1597 aa14.17□□□□□ -0.14
NDE1-207ENST00000573203 PLXNC1O60486 1568 aa14.17□□□□□ -0.14
NDE1-207ENST00000573203 MIA2Q96PC5 1412 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms